EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00001368 (Gene tree)
Gene ID: -
Gene Symbol: exc-7
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5520 bases
Position: chrII:9575971-9581490
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F35H8	RRM_5	PF13893.6	6.2e-11	1	1
F35H8	RRM_1	PF00076.22	2.4e-59	1	3
F35H8	RRM_1	PF00076.22	2.4e-59	2	3
F35H8	RRM_1	PF00076.22	2.4e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F35H8.5	-	2120	-	F35H8.5	456 (aa)	NP_496057	Q20084

Gene Model

Click here to download WBGene00001368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001368	exc-7	53	41.935	WBGene00012904	tiar-2	63	33.333
WBGene00001368	exc-7	51	34.524	WBGene00015943	tiar-1	62	34.524
WBGene00001368	exc-7	55	36.620	WBGene00003902	pab-1	59	36.232
WBGene00001368	exc-7	96	35.714	WBGene00001340	etr-1	56	36.923
WBGene00001368	exc-7	52	36.782	WBGene00006807	unc-75	99	34.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001368	exc-7	70	62.385	ENSG00000162374	ELAVL4	95	61.333	Homo_sapiens
WBGene00001368	exc-7	76	56.855	ENSAPOG00000020329	elavl4	80	65.347	Acanthochromis_polyacanthus
WBGene00001368	exc-7	70	62.385	ENSAMEG00000017455	ELAVL4	89	62.385	Ailuropoda_melanoleuca
WBGene00001368	exc-7	66	65.347	ENSACIG00000008793	elavl4	84	65.347	Amphilophus_citrinellus
WBGene00001368	exc-7	54	45.631	ENSAOCG00000022907	elavl4	89	45.631	Amphiprion_ocellaris
WBGene00001368	exc-7	66	65.347	ENSAPEG00000022826	elavl4	78	65.347	Amphiprion_percula
WBGene00001368	exc-7	66	65.347	ENSATEG00000006136	elavl4	82	65.347	Anabas_testudineus
WBGene00001368	exc-7	70	62.673	ENSACAG00000004527	ELAVL4	84	62.673	Anolis_carolinensis
WBGene00001368	exc-7	99	54.545	ENSANAG00000030598	ELAVL4	95	60.889	Aotus_nancymaae
WBGene00001368	exc-7	76	56.175	ENSACLG00000002786	elavl4	80	64.390	Astatotilapia_calliptera
WBGene00001368	exc-7	80	54.545	ENSAMXG00000000687	elavl4	85	61.927	Astyanax_mexicanus
WBGene00001368	exc-7	99	54.244	ENSBTAG00000021046	ELAVL4	95	62.385	Bos_taurus
WBGene00001368	exc-7	99	54.545	ENSCJAG00000013725	ELAVL4	95	60.889	Callithrix_jacchus
WBGene00001368	exc-7	70	62.385	ENSCAFG00000003927	ELAVL4	93	62.385	Canis_familiaris
WBGene00001368	exc-7	99	54.924	ENSCAFG00020013581	ELAVL4	93	62.385	Canis_lupus_dingo
WBGene00001368	exc-7	63	69.399	ENSCHIG00000002038	ELAVL4	87	69.399	Capra_hircus
WBGene00001368	exc-7	62	61.538	ENSTSYG00000004130	ELAVL4	87	63.551	Carlito_syrichta
WBGene00001368	exc-7	70	50.455	ENSCAPG00000011942	-	98	50.455	Cavia_aperea
WBGene00001368	exc-7	50	48.438	ENSCAPG00000005993	ELAVL4	81	53.333	Cavia_aperea
WBGene00001368	exc-7	99	54.924	ENSCPOG00000002044	-	95	61.333	Cavia_porcellus
WBGene00001368	exc-7	70	50.909	ENSCPOG00000022816	-	92	51.415	Cavia_porcellus
WBGene00001368	exc-7	99	54.545	ENSCCAG00000024797	ELAVL4	95	60.889	Cebus_capucinus
WBGene00001368	exc-7	99	54.924	ENSCATG00000029867	ELAVL4	95	61.333	Cercocebus_atys
WBGene00001368	exc-7	70	62.385	ENSCLAG00000005476	ELAVL4	95	61.161	Chinchilla_lanigera
WBGene00001368	exc-7	70	62.385	ENSCSAG00000001257	ELAVL4	93	62.385	Chlorocebus_sabaeus
WBGene00001368	exc-7	70	62.385	ENSCHOG00000002464	ELAVL4	84	62.385	Choloepus_hoffmanni
WBGene00001368	exc-7	99	54.924	ENSCPBG00000010017	ELAVL4	88	62.385	Chrysemys_picta_bellii
WBGene00001368	exc-7	85	39.904	ENSCING00000009052	-	82	38.938	Ciona_intestinalis
WBGene00001368	exc-7	99	54.924	ENSCANG00000043683	ELAVL4	95	61.333	Colobus_angolensis_palliatus
WBGene00001368	exc-7	99	54.924	ENSCGRG00001020348	Elavl4	95	61.333	Cricetulus_griseus_chok1gshd
WBGene00001368	exc-7	99	54.924	ENSCGRG00000009162	Elavl4	95	61.333	Cricetulus_griseus_crigri
WBGene00001368	exc-7	76	56.855	ENSCSEG00000020141	elavl4	80	65.347	Cynoglossus_semilaevis
WBGene00001368	exc-7	73	58.621	ENSCVAG00000019080	elavl4	86	58.621	Cyprinodon_variegatus
WBGene00001368	exc-7	80	54.924	ENSDARG00000045639	elavl4	87	54.924	Danio_rerio
WBGene00001368	exc-7	70	62.385	ENSDNOG00000033502	ELAVL4	92	62.385	Dasypus_novemcinctus
WBGene00001368	exc-7	99	54.924	ENSDORG00000012729	Elavl4	95	61.333	Dipodomys_ordii
WBGene00001368	exc-7	70	54.587	ENSETEG00000013779	ELAVL4	85	54.587	Echinops_telfairi
WBGene00001368	exc-7	71	61.607	ENSEASG00005010728	ELAVL4	95	61.607	Equus_asinus_asinus
WBGene00001368	exc-7	99	54.924	ENSECAG00000022284	ELAVL4	95	61.607	Equus_caballus
WBGene00001368	exc-7	70	62.385	ENSEEUG00000008766	ELAVL4	89	62.385	Erinaceus_europaeus
WBGene00001368	exc-7	80	54.545	ENSELUG00000008025	elavl4	90	54.545	Esox_lucius
WBGene00001368	exc-7	99	54.924	ENSFCAG00000010438	ELAVL4	95	61.333	Felis_catus
WBGene00001368	exc-7	70	62.385	ENSFALG00000005331	ELAVL4	87	62.385	Ficedula_albicollis
WBGene00001368	exc-7	99	54.924	ENSFDAG00000014507	ELAVL4	95	61.333	Fukomys_damarensis
WBGene00001368	exc-7	66	65.347	ENSFHEG00000004530	elavl4	77	65.347	Fundulus_heteroclitus
WBGene00001368	exc-7	68	63.208	ENSGMOG00000006515	elavl4	88	63.208	Gadus_morhua
WBGene00001368	exc-7	99	54.924	ENSGALG00000010533	ELAVL4	96	54.924	Gallus_gallus
WBGene00001368	exc-7	55	65.347	ENSGAFG00000015956	elavl4	67	65.347	Gambusia_affinis
WBGene00001368	exc-7	66	64.851	ENSGACG00000011152	elavl4	88	58.051	Gasterosteus_aculeatus
WBGene00001368	exc-7	99	62.385	ENSGAGG00000018269	ELAVL4	86	62.385	Gopherus_agassizii
WBGene00001368	exc-7	99	54.924	ENSGGOG00000000634	ELAVL4	95	61.333	Gorilla_gorilla
WBGene00001368	exc-7	76	56.855	ENSHBUG00000009691	elavl4	80	65.347	Haplochromis_burtoni
WBGene00001368	exc-7	99	54.545	ENSHGLG00000000485	ELAVL4	95	60.889	Heterocephalus_glaber_female
WBGene00001368	exc-7	99	54.545	ENSHGLG00100002567	ELAVL4	95	60.889	Heterocephalus_glaber_male
WBGene00001368	exc-7	66	65.347	ENSHCOG00000002490	elavl4	84	65.347	Hippocampus_comes
WBGene00001368	exc-7	80	54.167	ENSIPUG00000001381	elavl4	90	54.167	Ictalurus_punctatus
WBGene00001368	exc-7	99	54.924	ENSSTOG00000027271	ELAVL4	95	61.333	Ictidomys_tridecemlineatus
WBGene00001368	exc-7	99	54.924	ENSJJAG00000023099	Elavl4	95	61.333	Jaculus_jaculus
WBGene00001368	exc-7	76	56.175	ENSKMAG00000022289	elavl4	77	64.390	Kryptolebias_marmoratus
WBGene00001368	exc-7	66	64.390	ENSLBEG00000007096	elavl4	78	59.459	Labrus_bergylta
WBGene00001368	exc-7	70	61.927	ENSLACG00000008316	ELAVL4	87	61.927	Latimeria_chalumnae
WBGene00001368	exc-7	70	61.927	ENSLOCG00000009363	elavl4	79	61.927	Lepisosteus_oculatus
WBGene00001368	exc-7	70	62.385	ENSLAFG00000001087	ELAVL4	89	62.385	Loxodonta_africana
WBGene00001368	exc-7	99	54.924	ENSMFAG00000039866	ELAVL4	95	61.333	Macaca_fascicularis
WBGene00001368	exc-7	99	54.104	ENSMMUG00000021933	ELAVL4	95	61.333	Macaca_mulatta
WBGene00001368	exc-7	99	54.924	ENSMNEG00000035576	ELAVL4	95	61.333	Macaca_nemestrina
WBGene00001368	exc-7	99	54.924	ENSMLEG00000028616	ELAVL4	95	61.333	Mandrillus_leucophaeus
WBGene00001368	exc-7	66	65.347	ENSMAMG00000004000	elavl4	83	65.347	Mastacembelus_armatus
WBGene00001368	exc-7	76	56.855	ENSMZEG00005010690	elavl4	77	65.347	Maylandia_zebra
WBGene00001368	exc-7	70	62.100	ENSMGAG00000010928	ELAVL4	87	62.100	Meleagris_gallopavo
WBGene00001368	exc-7	99	54.924	ENSMAUG00000021566	Elavl4	95	61.333	Mesocricetus_auratus
WBGene00001368	exc-7	99	54.924	ENSMICG00000003286	ELAVL4	95	62.385	Microcebus_murinus
WBGene00001368	exc-7	99	54.924	ENSMOCG00000010309	Elavl4	95	61.333	Microtus_ochrogaster
WBGene00001368	exc-7	66	65.347	ENSMMOG00000020264	elavl4	78	65.347	Mola_mola
WBGene00001368	exc-7	94	53.704	ENSMODG00000003850	-	93	53.704	Monodelphis_domestica
WBGene00001368	exc-7	76	56.855	ENSMALG00000016432	elavl4	77	65.347	Monopterus_albus
WBGene00001368	exc-7	99	54.924	MGP_CAROLIEiJ_G0026289	Elavl4	96	62.121	Mus_caroli
WBGene00001368	exc-7	99	54.924	ENSMUSG00000028546	Elavl4	96	62.121	Mus_musculus
WBGene00001368	exc-7	99	54.924	MGP_PahariEiJ_G0028622	Elavl4	100	60.584	Mus_pahari
WBGene00001368	exc-7	99	54.924	MGP_SPRETEiJ_G0027258	Elavl4	96	62.121	Mus_spretus
WBGene00001368	exc-7	70	62.385	ENSMPUG00000007192	ELAVL4	90	62.385	Mustela_putorius_furo
WBGene00001368	exc-7	70	62.385	ENSMLUG00000006226	ELAVL4	92	62.385	Myotis_lucifugus
WBGene00001368	exc-7	99	54.924	ENSNGAG00000023123	Elavl4	95	61.333	Nannospalax_galili
WBGene00001368	exc-7	99	54.924	ENSNLEG00000016303	ELAVL4	95	61.333	Nomascus_leucogenys
WBGene00001368	exc-7	70	62.385	ENSMEUG00000007145	ELAVL4	85	62.385	Notamacropus_eugenii
WBGene00001368	exc-7	70	62.385	ENSOPRG00000015300	ELAVL4	89	62.385	Ochotona_princeps
WBGene00001368	exc-7	99	54.924	ENSODEG00000006770	ELAVL4	95	61.333	Octodon_degus
WBGene00001368	exc-7	66	65.347	ENSONIG00000002360	elavl4	82	65.347	Oreochromis_niloticus
WBGene00001368	exc-7	71	47.973	ENSOANG00000007377	ELAVL4	100	47.973	Ornithorhynchus_anatinus
WBGene00001368	exc-7	70	62.385	ENSOCUG00000016262	ELAVL4	82	62.385	Oryctolagus_cuniculus
WBGene00001368	exc-7	79	54.962	ENSORLG00000028487	elavl4	77	62.500	Oryzias_latipes
WBGene00001368	exc-7	79	55.814	ENSORLG00020014277	elavl4	76	63.679	Oryzias_latipes_hni
WBGene00001368	exc-7	79	55.814	ENSORLG00015010143	elavl4	76	63.679	Oryzias_latipes_hsok
WBGene00001368	exc-7	76	56.175	ENSOMEG00000009988	elavl4	86	56.175	Oryzias_melastigma
WBGene00001368	exc-7	70	62.385	ENSOGAG00000016990	ELAVL4	92	62.385	Otolemur_garnettii
WBGene00001368	exc-7	70	62.385	ENSOARG00000004264	ELAVL4	92	62.385	Ovis_aries
WBGene00001368	exc-7	99	54.924	ENSPPAG00000042402	ELAVL4	93	62.385	Pan_paniscus
WBGene00001368	exc-7	70	62.385	ENSPPRG00000002764	ELAVL4	95	61.333	Panthera_pardus
WBGene00001368	exc-7	70	62.385	ENSPTIG00000016727	ELAVL4	95	61.333	Panthera_tigris_altaica
WBGene00001368	exc-7	99	54.924	ENSPTRG00000000723	ELAVL4	95	61.333	Pan_troglodytes
WBGene00001368	exc-7	99	54.924	ENSPANG00000017754	ELAVL4	95	61.333	Papio_anubis
WBGene00001368	exc-7	80	54.340	ENSPKIG00000006999	elavl4	86	61.644	Paramormyrops_kingsleyae
WBGene00001368	exc-7	70	62.385	ENSPSIG00000008545	ELAVL4	88	62.385	Pelodiscus_sinensis
WBGene00001368	exc-7	66	65.842	ENSPMGG00000022175	elavl4	83	65.842	Periophthalmus_magnuspinnatus
WBGene00001368	exc-7	92	64.481	ENSPEMG00000021058	Elavl3	90	64.481	Peromyscus_maniculatus_bairdii
WBGene00001368	exc-7	64	53.465	ENSPCIG00000017116	-	85	53.465	Phascolarctos_cinereus
WBGene00001368	exc-7	66	65.347	ENSPFOG00000004811	elavl4	100	47.287	Poecilia_formosa
WBGene00001368	exc-7	66	65.347	ENSPLAG00000008085	elavl4	82	65.347	Poecilia_latipinna
WBGene00001368	exc-7	76	56.855	ENSPMEG00000015619	elavl4	83	56.855	Poecilia_mexicana
WBGene00001368	exc-7	76	56.855	ENSPREG00000018937	elavl4	80	65.347	Poecilia_reticulata
WBGene00001368	exc-7	70	62.844	ENSPPYG00000001367	ELAVL4	92	62.844	Pongo_abelii
WBGene00001368	exc-7	70	62.385	ENSPCAG00000008215	ELAVL4	89	62.385	Procavia_capensis
WBGene00001368	exc-7	99	54.412	ENSPCOG00000024957	ELAVL4	95	61.333	Propithecus_coquereli
WBGene00001368	exc-7	61	61.927	ENSPVAG00000003632	ELAVL4	74	61.927	Pteropus_vampyrus
WBGene00001368	exc-7	66	65.347	ENSPNYG00000021720	elavl4	83	65.347	Pundamilia_nyererei
WBGene00001368	exc-7	80	54.545	ENSPNAG00000017169	elavl4	85	61.927	Pygocentrus_nattereri
WBGene00001368	exc-7	70	62.385	ENSRNOG00000023601	Elavl4	89	62.385	Rattus_norvegicus
WBGene00001368	exc-7	99	54.924	ENSRBIG00000043810	ELAVL4	95	61.333	Rhinopithecus_bieti
WBGene00001368	exc-7	99	54.924	ENSRROG00000044786	ELAVL4	95	61.333	Rhinopithecus_roxellana
WBGene00001368	exc-7	99	54.545	ENSSBOG00000022965	ELAVL4	95	61.927	Saimiri_boliviensis_boliviensis
WBGene00001368	exc-7	70	62.385	ENSSHAG00000013832	-	88	62.385	Sarcophilus_harrisii
WBGene00001368	exc-7	61	59.563	ENSSHAG00000001657	-	79	59.563	Sarcophilus_harrisii
WBGene00001368	exc-7	80	54.545	ENSSFOG00015015838	elavl4	85	61.927	Scleropages_formosus
WBGene00001368	exc-7	66	65.347	ENSSMAG00000006881	elavl4	80	64.390	Scophthalmus_maximus
WBGene00001368	exc-7	66	65.347	ENSSDUG00000000045	elavl4	76	65.347	Seriola_dumerili
WBGene00001368	exc-7	76	56.855	ENSSLDG00000005260	elavl4	77	65.347	Seriola_lalandi_dorsalis
WBGene00001368	exc-7	70	62.385	ENSSARG00000010733	ELAVL4	90	62.385	Sorex_araneus
WBGene00001368	exc-7	70	61.927	ENSSPUG00000011636	ELAVL4	89	61.927	Sphenodon_punctatus
WBGene00001368	exc-7	66	65.347	ENSSPAG00000018867	elavl4	80	65.347	Stegastes_partitus
WBGene00001368	exc-7	99	54.924	ENSSSCG00000037291	ELAVL4	92	62.385	Sus_scrofa
WBGene00001368	exc-7	70	62.385	ENSTGUG00000008597	ELAVL4	88	62.385	Taeniopygia_guttata
WBGene00001368	exc-7	69	64.019	ENSTRUG00000000523	elavl4	83	64.019	Takifugu_rubripes
WBGene00001368	exc-7	69	63.551	ENSTNIG00000015485	elavl4	82	63.551	Tetraodon_nigroviridis
WBGene00001368	exc-7	63	61.728	ENSTBEG00000011730	ELAVL4	69	61.728	Tupaia_belangeri
WBGene00001368	exc-7	57	61.261	ENSTTRG00000012441	ELAVL4	53	61.261	Tursiops_truncatus
WBGene00001368	exc-7	99	54.924	ENSUAMG00000013026	ELAVL4	95	61.435	Ursus_americanus
WBGene00001368	exc-7	99	54.924	ENSUMAG00000023149	ELAVL4	95	61.435	Ursus_maritimus
WBGene00001368	exc-7	70	62.385	ENSVPAG00000011606	ELAVL4	89	62.385	Vicugna_pacos
WBGene00001368	exc-7	99	54.924	ENSVVUG00000006175	ELAVL4	93	62.385	Vulpes_vulpes
WBGene00001368	exc-7	70	54.656	ENSXETG00000008680	elavl4	89	54.656	Xenopus_tropicalis
WBGene00001368	exc-7	76	56.855	ENSXMAG00000025683	elavl4	80	65.347	Xiphophorus_maculatus