EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001372 (Gene tree)
Gene ID: -
Gene Symbol: exo-3
Alias: -
Full Name: DNA-(apurinic or apyrimidinic site) lyase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1710 bases
Position: chrI:11907571-11909280
Accession: G5EBR7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R09B3	Exo_endo_phos	PF03372.23	1.5e-09	1	1
R09B3	Exo_endo_phos	PF03372.23	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R09B3.1a.2	-	985	NM_001026413	R09B3.1a.2	288 (aa)	NP_001021584	G5EBR7
R09B3.1b	-	744	NM_001026414	R09B3.1b	186 (aa)	NP_001021585	Q564V5
R09B3.1a.1	-	933	NM_001026413	R09B3.1a.1	288 (aa)	NP_001021584	G5EBR7

Gene Model

Click here to download WBGene00001372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001372	exo-3	88	45.312	ENSG00000100823	APEX1	92	40.741	Homo_sapiens
WBGene00001372	exo-3	92	44.944	ENSAPOG00000017002	apex1	92	43.706	Acanthochromis_polyacanthus
WBGene00001372	exo-3	88	44.922	ENSAMEG00000005418	APEX1	80	44.922	Ailuropoda_melanoleuca
WBGene00001372	exo-3	92	46.442	ENSACIG00000010653	apex1	95	45.105	Amphilophus_citrinellus
WBGene00001372	exo-3	88	46.667	ENSAOCG00000009649	apex1	91	43.706	Amphiprion_ocellaris
WBGene00001372	exo-3	92	45.318	ENSAPEG00000021453	apex1	91	44.056	Amphiprion_percula
WBGene00001372	exo-3	92	45.318	ENSATEG00000002883	apex1	89	44.406	Anabas_testudineus
WBGene00001372	exo-3	88	46.275	ENSACAG00000008099	APEX1	89	43.357	Anolis_carolinensis
WBGene00001372	exo-3	88	44.922	ENSANAG00000030117	APEX1	80	44.922	Aotus_nancymaae
WBGene00001372	exo-3	92	44.944	ENSACLG00000018441	apex1	98	43.137	Astatotilapia_calliptera
WBGene00001372	exo-3	98	43.509	ENSAMXG00000034699	apex1	90	43.509	Astyanax_mexicanus
WBGene00001372	exo-3	88	44.922	ENSBTAG00000002745	APEX1	80	44.922	Bos_taurus
WBGene00001372	exo-3	88	44.922	ENSCJAG00000009726	APEX1	80	44.922	Callithrix_jacchus
WBGene00001372	exo-3	88	44.922	ENSCAFG00000032033	APEX1	80	44.922	Canis_familiaris
WBGene00001372	exo-3	88	44.922	ENSCAFG00020014377	-	80	44.922	Canis_lupus_dingo
WBGene00001372	exo-3	88	44.531	ENSCHIG00000007298	-	80	44.531	Capra_hircus
WBGene00001372	exo-3	87	37.549	ENSCHIG00000014537	-	79	37.549	Capra_hircus
WBGene00001372	exo-3	88	45.312	ENSTSYG00000034813	APEX1	80	45.312	Carlito_syrichta
WBGene00001372	exo-3	87	43.359	ENSCAPG00000016235	APEX1	88	44.828	Cavia_aperea
WBGene00001372	exo-3	93	43.542	ENSCPOG00000030909	APEX1	84	43.542	Cavia_porcellus
WBGene00001372	exo-3	88	44.922	ENSCCAG00000033056	-	80	44.922	Cebus_capucinus
WBGene00001372	exo-3	88	37.597	ENSCCAG00000031931	-	79	37.597	Cebus_capucinus
WBGene00001372	exo-3	88	44.531	ENSCATG00000015580	APEX1	80	44.531	Cercocebus_atys
WBGene00001372	exo-3	93	43.542	ENSCLAG00000001002	APEX1	84	43.542	Chinchilla_lanigera
WBGene00001372	exo-3	88	44.531	ENSCSAG00000016685	-	80	44.531	Chlorocebus_sabaeus
WBGene00001372	exo-3	88	44.531	ENSCSAG00000016670	-	80	44.531	Chlorocebus_sabaeus
WBGene00001372	exo-3	88	48.235	ENSCPBG00000009567	APEX1	80	48.235	Chrysemys_picta_bellii
WBGene00001372	exo-3	90	45.802	ENSCING00000008137	-	83	45.802	Ciona_intestinalis
WBGene00001372	exo-3	94	39.927	ENSCSAVG00000007144	-	99	41.406	Ciona_savignyi
WBGene00001372	exo-3	88	44.922	ENSCANG00000030726	APEX1	80	44.922	Colobus_angolensis_palliatus
WBGene00001372	exo-3	88	45.312	ENSCGRG00001017046	Apex1	80	45.312	Cricetulus_griseus_chok1gshd
WBGene00001372	exo-3	88	45.312	ENSCGRG00000008984	Apex1	80	45.312	Cricetulus_griseus_crigri
WBGene00001372	exo-3	98	42.810	ENSCSEG00000017499	apex1	98	42.810	Cynoglossus_semilaevis
WBGene00001372	exo-3	92	45.318	ENSCVAG00000022075	apex1	93	43.253	Cyprinodon_variegatus
WBGene00001372	exo-3	91	44.318	ENSDARG00000045843	apex1	91	42.958	Danio_rerio
WBGene00001372	exo-3	87	39.921	ENSDNOG00000042234	APEX1	74	39.921	Dasypus_novemcinctus
WBGene00001372	exo-3	88	44.922	ENSDORG00000001616	Apex1	80	44.922	Dipodomys_ordii
WBGene00001372	exo-3	88	44.531	ENSETEG00000004855	-	80	44.531	Echinops_telfairi
WBGene00001372	exo-3	80	44.635	ENSEBUG00000000622	-	95	43.496	Eptatretus_burgeri
WBGene00001372	exo-3	88	44.922	ENSEASG00005017489	APEX1	59	44.922	Equus_asinus_asinus
WBGene00001372	exo-3	88	44.922	ENSECAG00000022325	APEX1	65	44.922	Equus_caballus
WBGene00001372	exo-3	85	45.161	ENSEEUG00000012569	APEX1	85	45.161	Erinaceus_europaeus
WBGene00001372	exo-3	92	44.195	ENSELUG00000021706	apex1	90	43.007	Esox_lucius
WBGene00001372	exo-3	88	45.312	ENSFCAG00000030869	APEX1	80	45.312	Felis_catus
WBGene00001372	exo-3	93	43.911	ENSFDAG00000006120	APEX1	84	43.911	Fukomys_damarensis
WBGene00001372	exo-3	92	44.569	ENSFHEG00000009031	apex1	76	43.357	Fundulus_heteroclitus
WBGene00001372	exo-3	90	46.388	ENSGMOG00000007943	apex1	84	46.388	Gadus_morhua
WBGene00001372	exo-3	92	43.609	ENSGAFG00000005311	apex1	91	42.456	Gambusia_affinis
WBGene00001372	exo-3	92	44.737	ENSGACG00000019497	apex1	98	45.038	Gasterosteus_aculeatus
WBGene00001372	exo-3	88	47.843	ENSGAGG00000014999	APEX1	91	44.521	Gopherus_agassizii
WBGene00001372	exo-3	88	44.922	ENSGGOG00000002128	APEX1	80	44.922	Gorilla_gorilla
WBGene00001372	exo-3	92	44.569	ENSHBUG00000005894	apex1	92	42.857	Haplochromis_burtoni
WBGene00001372	exo-3	93	43.911	ENSHGLG00000002848	APEX1	84	43.911	Heterocephalus_glaber_female
WBGene00001372	exo-3	93	43.911	ENSHGLG00100017878	APEX1	84	43.911	Heterocephalus_glaber_male
WBGene00001372	exo-3	92	45.318	ENSHCOG00000009961	apex1	85	45.318	Hippocampus_comes
WBGene00001372	exo-3	98	42.807	ENSIPUG00000005799	apex1	91	42.807	Ictalurus_punctatus
WBGene00001372	exo-3	93	44.649	ENSSTOG00000010096	APEX1	84	44.649	Ictidomys_tridecemlineatus
WBGene00001372	exo-3	88	40.551	ENSJJAG00000020465	-	81	40.551	Jaculus_jaculus
WBGene00001372	exo-3	88	38.281	ENSJJAG00000003660	-	80	38.281	Jaculus_jaculus
WBGene00001372	exo-3	88	44.922	ENSJJAG00000012067	-	80	44.922	Jaculus_jaculus
WBGene00001372	exo-3	92	42.697	ENSKMAG00000021171	apex1	91	41.958	Kryptolebias_marmoratus
WBGene00001372	exo-3	92	46.442	ENSLBEG00000010248	apex1	91	45.455	Labrus_bergylta
WBGene00001372	exo-3	90	43.295	ENSLACG00000008617	APEX1	83	43.295	Latimeria_chalumnae
WBGene00001372	exo-3	99	43.056	ENSLOCG00000015516	apex1	90	43.056	Lepisosteus_oculatus
WBGene00001372	exo-3	88	44.141	ENSLAFG00000021872	APEX1	80	44.141	Loxodonta_africana
WBGene00001372	exo-3	88	44.531	ENSMFAG00000002565	APEX1	80	44.531	Macaca_fascicularis
WBGene00001372	exo-3	88	44.531	ENSMMUG00000048039	APEX1	80	44.531	Macaca_mulatta
WBGene00001372	exo-3	88	44.531	ENSMNEG00000036944	APEX1	80	44.531	Macaca_nemestrina
WBGene00001372	exo-3	88	44.531	ENSMLEG00000042125	APEX1	80	44.531	Mandrillus_leucophaeus
WBGene00001372	exo-3	92	44.195	ENSMAMG00000023526	apex1	91	43.007	Mastacembelus_armatus
WBGene00001372	exo-3	92	44.944	ENSMZEG00005014187	apex1	98	43.137	Maylandia_zebra
WBGene00001372	exo-3	92	43.333	ENSMAUG00000013994	Apex1	84	43.333	Mesocricetus_auratus
WBGene00001372	exo-3	88	44.922	ENSMICG00000043554	APEX1	80	44.922	Microcebus_murinus
WBGene00001372	exo-3	88	44.531	ENSMOCG00000013721	Apex1	80	44.531	Microtus_ochrogaster
WBGene00001372	exo-3	92	46.067	ENSMMOG00000010031	apex1	90	43.945	Mola_mola
WBGene00001372	exo-3	93	44.280	ENSMODG00000007125	APEX1	83	44.280	Monodelphis_domestica
WBGene00001372	exo-3	92	42.697	ENSMALG00000011699	apex1	76	41.608	Monopterus_albus
WBGene00001372	exo-3	88	45.312	MGP_CAROLIEiJ_G0019209	Apex1	80	45.312	Mus_caroli
WBGene00001372	exo-3	88	44.922	ENSMUSG00000035960	Apex1	80	44.922	Mus_musculus
WBGene00001372	exo-3	88	44.922	MGP_PahariEiJ_G0030232	Apex1	80	44.922	Mus_pahari
WBGene00001372	exo-3	88	44.922	MGP_SPRETEiJ_G0020101	Apex1	80	44.922	Mus_spretus
WBGene00001372	exo-3	88	44.922	ENSMLUG00000028957	APEX1	79	44.922	Myotis_lucifugus
WBGene00001372	exo-3	88	44.922	ENSNGAG00000002725	-	80	44.922	Nannospalax_galili
WBGene00001372	exo-3	84	35.039	ENSNGAG00000021748	-	76	35.039	Nannospalax_galili
WBGene00001372	exo-3	92	44.569	ENSNBRG00000005334	apex1	90	42.810	Neolamprologus_brichardi
WBGene00001372	exo-3	88	45.312	ENSNLEG00000010839	APEX1	81	45.312	Nomascus_leucogenys
WBGene00001372	exo-3	88	45.312	ENSMEUG00000014519	APEX1	81	45.312	Notamacropus_eugenii
WBGene00001372	exo-3	88	44.922	ENSOPRG00000014029	APEX1	80	44.922	Ochotona_princeps
WBGene00001372	exo-3	88	35.156	ENSODEG00000006583	-	88	33.793	Octodon_degus
WBGene00001372	exo-3	84	40.984	ENSODEG00000004777	-	80	40.984	Octodon_degus
WBGene00001372	exo-3	88	44.922	ENSODEG00000001703	-	80	44.922	Octodon_degus
WBGene00001372	exo-3	92	44.944	ENSONIG00000012089	apex1	98	43.137	Oreochromis_niloticus
WBGene00001372	exo-3	88	43.750	ENSOANG00000008836	APEX1	63	43.750	Ornithorhynchus_anatinus
WBGene00001372	exo-3	88	45.312	ENSOCUG00000005022	APEX1	80	45.312	Oryctolagus_cuniculus
WBGene00001372	exo-3	92	44.944	ENSORLG00000012378	apex1	91	43.706	Oryzias_latipes
WBGene00001372	exo-3	92	44.944	ENSORLG00020021371	apex1	91	43.706	Oryzias_latipes_hni
WBGene00001372	exo-3	92	44.944	ENSORLG00015020089	apex1	91	43.706	Oryzias_latipes_hsok
WBGene00001372	exo-3	92	44.195	ENSOMEG00000018876	apex1	91	43.007	Oryzias_melastigma
WBGene00001372	exo-3	93	43.542	ENSOGAG00000013335	-	84	43.542	Otolemur_garnettii
WBGene00001372	exo-3	93	38.376	ENSOGAG00000029355	-	84	38.376	Otolemur_garnettii
WBGene00001372	exo-3	88	44.141	ENSOARG00000019740	-	80	44.141	Ovis_aries
WBGene00001372	exo-3	87	38.976	ENSOARG00000014424	-	80	38.976	Ovis_aries
WBGene00001372	exo-3	85	42.742	ENSOARG00000001876	-	80	42.742	Ovis_aries
WBGene00001372	exo-3	88	44.922	ENSPPAG00000038760	APEX1	81	44.922	Pan_paniscus
WBGene00001372	exo-3	88	45.312	ENSPPRG00000011794	APEX1	80	45.312	Panthera_pardus
WBGene00001372	exo-3	88	45.312	ENSPTIG00000014829	APEX1	80	45.312	Panthera_tigris_altaica
WBGene00001372	exo-3	88	44.922	ENSPTRG00000006093	APEX1	81	44.922	Pan_troglodytes
WBGene00001372	exo-3	88	44.531	ENSPANG00000022757	APEX1	80	44.531	Papio_anubis
WBGene00001372	exo-3	92	45.113	ENSPKIG00000003504	apex1	83	45.594	Paramormyrops_kingsleyae
WBGene00001372	exo-3	80	44.444	ENSPMGG00000016596	apex1	70	44.444	Periophthalmus_magnuspinnatus
WBGene00001372	exo-3	88	44.922	ENSPEMG00000019097	Apex1	80	44.922	Peromyscus_maniculatus_bairdii
WBGene00001372	exo-3	90	46.183	ENSPMAG00000007275	-	88	46.183	Petromyzon_marinus
WBGene00001372	exo-3	88	45.312	ENSPCIG00000023274	APEX1	80	45.312	Phascolarctos_cinereus
WBGene00001372	exo-3	92	44.944	ENSPFOG00000004178	apex1	93	42.907	Poecilia_formosa
WBGene00001372	exo-3	92	44.776	ENSPLAG00000012779	apex1	93	42.907	Poecilia_latipinna
WBGene00001372	exo-3	92	44.944	ENSPMEG00000019623	apex1	93	42.907	Poecilia_mexicana
WBGene00001372	exo-3	92	45.113	ENSPREG00000014298	apex1	92	43.056	Poecilia_reticulata
WBGene00001372	exo-3	88	44.922	ENSPPYG00000005565	APEX1	80	44.922	Pongo_abelii
WBGene00001372	exo-3	88	42.969	ENSPCAG00000010376	APEX1	80	42.969	Procavia_capensis
WBGene00001372	exo-3	88	45.312	ENSPCOG00000021564	APEX1	80	45.312	Propithecus_coquereli
WBGene00001372	exo-3	88	44.922	ENSPVAG00000010736	APEX1	79	44.922	Pteropus_vampyrus
WBGene00001372	exo-3	92	44.944	ENSPNYG00000023940	apex1	98	43.137	Pundamilia_nyererei
WBGene00001372	exo-3	95	43.478	ENSPNAG00000020897	apex1	87	44.275	Pygocentrus_nattereri
WBGene00001372	exo-3	88	45.312	ENSRNOG00000009663	Apex1	80	45.312	Rattus_norvegicus
WBGene00001372	exo-3	88	44.922	ENSRBIG00000038325	APEX1	79	44.922	Rhinopithecus_bieti
WBGene00001372	exo-3	88	37.984	ENSSBOG00000031372	-	82	37.984	Saimiri_boliviensis_boliviensis
WBGene00001372	exo-3	88	44.922	ENSSBOG00000018921	-	80	44.922	Saimiri_boliviensis_boliviensis
WBGene00001372	exo-3	88	44.788	ENSSHAG00000013524	APEX1	79	44.788	Sarcophilus_harrisii
WBGene00001372	exo-3	92	43.985	ENSSFOG00015001948	apex1	91	42.807	Scleropages_formosus
WBGene00001372	exo-3	92	45.693	ENSSMAG00000013348	apex1	90	44.755	Scophthalmus_maximus
WBGene00001372	exo-3	92	43.820	ENSSDUG00000016377	apex1	91	43.007	Seriola_dumerili
WBGene00001372	exo-3	92	43.446	ENSSLDG00000023005	apex1	91	42.657	Seriola_lalandi_dorsalis
WBGene00001372	exo-3	88	43.529	ENSSPUG00000000531	APEX1	85	43.529	Sphenodon_punctatus
WBGene00001372	exo-3	92	45.693	ENSSPAG00000000458	apex1	94	43.599	Stegastes_partitus
WBGene00001372	exo-3	63	31.746	ENSSSCG00000039705	-	72	31.746	Sus_scrofa
WBGene00001372	exo-3	88	44.922	ENSSSCG00000040060	-	80	44.922	Sus_scrofa
WBGene00001372	exo-3	78	42.035	ENSTGUG00000014378	APEX1	96	42.035	Taeniopygia_guttata
WBGene00001372	exo-3	92	45.489	ENSTRUG00000004268	apex1	85	44.211	Takifugu_rubripes
WBGene00001372	exo-3	98	43.509	ENSTNIG00000005778	apex1	92	43.509	Tetraodon_nigroviridis
WBGene00001372	exo-3	88	44.531	ENSTBEG00000006405	APEX1	80	44.186	Tupaia_belangeri
WBGene00001372	exo-3	79	42.424	ENSTTRG00000007860	APEX1	97	42.424	Tursiops_truncatus
WBGene00001372	exo-3	88	44.922	ENSUAMG00000010457	APEX1	80	44.922	Ursus_americanus
WBGene00001372	exo-3	88	44.922	ENSUMAG00000009178	APEX1	80	44.922	Ursus_maritimus
WBGene00001372	exo-3	80	43.777	ENSVPAG00000005083	APEX1	99	43.777	Vicugna_pacos
WBGene00001372	exo-3	88	44.922	ENSVVUG00000009010	APEX1	80	44.922	Vulpes_vulpes
WBGene00001372	exo-3	90	45.594	ENSXETG00000024773	apex1	82	45.594	Xenopus_tropicalis
WBGene00001372	exo-3	92	43.233	ENSXCOG00000015233	apex1	92	41.319	Xiphophorus_couchianus
WBGene00001372	exo-3	92	43.233	ENSXMAG00000006195	apex1	93	41.319	Xiphophorus_maculatus