EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001497 (Gene tree)
Gene ID: -
Gene Symbol: fars-1
Alias: -
Full Name: Phenylalanyl Amino-acyl tRNA Synthetase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2660 bases
Position: chrI:6211986-6214645
Accession: Q86B36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T08B2	tRNA-synt_2d	PF01409.20	1.4e-90	1	1
T08B2	tRNA-synt_2d	PF01409.20	1.4e-90	1	1
T08B2	tRNA-synt_2d	PF01409.20	1.8e-90	1	1
T08B2	tRNA-synt_2d	PF01409.20	1.8e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T08B2.9a.1	-	1820	NM_059391	T08B2.9a.1	552 (aa)	NP_491792	Q9GYS8
T08B2.9a.2	-	1821	NM_059391	T08B2.9a.2	552 (aa)	NP_491792	Q9GYS8
T08B2.9b.2	-	1643	NM_182004	T08B2.9b.2	496 (aa)	NP_871804	Q86B36
T08B2.9b.1	-	1810	NM_182004	T08B2.9b.1	496 (aa)	NP_871804	Q86B36

Gene Model

Click here to download WBGene00001497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001497	fars-1	95	60.294	ENSG00000179115	FARSA	86	69.343	Homo_sapiens
WBGene00001497	fars-1	94	62.316	ENSAPOG00000011465	farsa	96	62.316	Acanthochromis_polyacanthus
WBGene00001497	fars-1	95	60.084	ENSAMEG00000012446	FARSA	94	60.084	Ailuropoda_melanoleuca
WBGene00001497	fars-1	94	58.017	ENSACIG00000020499	farsa	95	58.017	Amphilophus_citrinellus
WBGene00001497	fars-1	94	62.737	ENSAOCG00000000581	farsa	96	62.737	Amphiprion_ocellaris
WBGene00001497	fars-1	94	62.737	ENSAPEG00000017695	farsa	96	62.737	Amphiprion_percula
WBGene00001497	fars-1	97	52.352	ENSATEG00000012633	farsa	98	52.352	Anabas_testudineus
WBGene00001497	fars-1	94	57.384	ENSATEG00000012807	farsa	98	55.943	Anabas_testudineus
WBGene00001497	fars-1	94	61.603	ENSACAG00000017166	FARSA	80	61.603	Anolis_carolinensis
WBGene00001497	fars-1	95	60.084	ENSANAG00000037420	FARSA	94	60.084	Aotus_nancymaae
WBGene00001497	fars-1	94	63.158	ENSACLG00000001716	farsa	96	63.158	Astatotilapia_calliptera
WBGene00001497	fars-1	93	63.090	ENSAMXG00000037912	farsa	94	63.226	Astyanax_mexicanus
WBGene00001497	fars-1	95	60.924	ENSBTAG00000021374	FARSA	94	60.924	Bos_taurus
WBGene00001497	fars-1	99	58.551	ENSCJAG00000004686	FARSA	93	58.167	Callithrix_jacchus
WBGene00001497	fars-1	95	60.504	ENSCAFG00000017096	FARSA	94	60.504	Canis_familiaris
WBGene00001497	fars-1	95	60.504	ENSCAFG00020005315	FARSA	94	60.504	Canis_lupus_dingo
WBGene00001497	fars-1	95	59.283	ENSCHIG00000022617	FARSA	94	59.283	Capra_hircus
WBGene00001497	fars-1	91	59.603	ENSTSYG00000002595	FARSA	83	59.603	Carlito_syrichta
WBGene00001497	fars-1	92	60.000	ENSCAPG00000011353	FARSA	96	61.419	Cavia_aperea
WBGene00001497	fars-1	97	59.918	ENSCPOG00000000787	FARSA	96	59.918	Cavia_porcellus
WBGene00001497	fars-1	95	60.084	ENSCCAG00000028176	FARSA	94	60.084	Cebus_capucinus
WBGene00001497	fars-1	97	60.123	ENSCLAG00000015489	FARSA	96	60.123	Chinchilla_lanigera
WBGene00001497	fars-1	92	61.290	ENSCSAG00000006530	FARSA	97	61.290	Chlorocebus_sabaeus
WBGene00001497	fars-1	95	60.924	ENSCPBG00000023915	FARSA	94	60.924	Chrysemys_picta_bellii
WBGene00001497	fars-1	98	59.026	ENSCING00000002567	-	99	59.026	Ciona_intestinalis
WBGene00001497	fars-1	98	59.798	ENSCSAVG00000010683	-	98	59.798	Ciona_savignyi
WBGene00001497	fars-1	95	60.504	ENSCANG00000043649	-	94	60.504	Colobus_angolensis_palliatus
WBGene00001497	fars-1	95	60.714	ENSCGRG00001019769	Farsa	94	60.714	Cricetulus_griseus_chok1gshd
WBGene00001497	fars-1	95	60.714	ENSCGRG00000013415	Farsa	94	60.714	Cricetulus_griseus_crigri
WBGene00001497	fars-1	94	62.105	ENSCSEG00000016214	farsa	92	63.368	Cynoglossus_semilaevis
WBGene00001497	fars-1	94	62.105	ENSCVAG00000007907	farsa	96	62.105	Cyprinodon_variegatus
WBGene00001497	fars-1	92	63.011	ENSDARG00000098825	farsa	94	63.011	Danio_rerio
WBGene00001497	fars-1	94	60.842	ENSDNOG00000032350	FARSA	97	60.417	Dasypus_novemcinctus
WBGene00001497	fars-1	97	59.509	ENSDORG00000010118	Farsa	96	59.509	Dipodomys_ordii
WBGene00001497	fars-1	98	60.446	FBgn0030007	alpha-PheRS	99	60.446	Drosophila_melanogaster
WBGene00001497	fars-1	98	54.065	ENSETEG00000018673	FARSA	97	54.065	Echinops_telfairi
WBGene00001497	fars-1	55	54.093	ENSEBUG00000008545	farsa	94	54.093	Eptatretus_burgeri
WBGene00001497	fars-1	88	51.961	ENSEASG00005004093	FARSA	91	51.961	Equus_asinus_asinus
WBGene00001497	fars-1	95	60.504	ENSECAG00000015139	FARSA	89	60.504	Equus_caballus
WBGene00001497	fars-1	95	62.395	ENSELUG00000010183	farsa	98	63.982	Esox_lucius
WBGene00001497	fars-1	95	60.294	ENSFCAG00000023511	FARSA	94	60.294	Felis_catus
WBGene00001497	fars-1	97	60.327	ENSFDAG00000005987	FARSA	96	60.327	Fukomys_damarensis
WBGene00001497	fars-1	94	62.105	ENSFHEG00000009382	farsa	99	57.786	Fundulus_heteroclitus
WBGene00001497	fars-1	94	64.421	ENSGMOG00000018319	farsa	96	64.421	Gadus_morhua
WBGene00001497	fars-1	94	58.228	ENSGALG00000040258	FARSA	84	57.983	Gallus_gallus
WBGene00001497	fars-1	94	62.526	ENSGAFG00000014146	farsa	96	62.526	Gambusia_affinis
WBGene00001497	fars-1	94	62.185	ENSGACG00000006278	farsa	96	62.185	Gasterosteus_aculeatus
WBGene00001497	fars-1	95	61.765	ENSGAGG00000000753	FARSA	94	61.765	Gopherus_agassizii
WBGene00001497	fars-1	95	60.504	ENSGGOG00000003418	FARSA	94	60.504	Gorilla_gorilla
WBGene00001497	fars-1	94	63.158	ENSHBUG00000019852	farsa	96	63.158	Haplochromis_burtoni
WBGene00001497	fars-1	97	59.918	ENSHGLG00000005213	FARSA	97	59.918	Heterocephalus_glaber_female
WBGene00001497	fars-1	97	59.918	ENSHGLG00100009586	FARSA	96	59.918	Heterocephalus_glaber_male
WBGene00001497	fars-1	99	60.362	ENSHCOG00000019548	farsa	99	60.362	Hippocampus_comes
WBGene00001497	fars-1	95	62.815	ENSIPUG00000007635	farsa	96	62.815	Ictalurus_punctatus
WBGene00001497	fars-1	95	60.084	ENSSTOG00000008748	FARSA	94	60.084	Ictidomys_tridecemlineatus
WBGene00001497	fars-1	94	63.158	ENSKMAG00000010698	farsa	96	63.158	Kryptolebias_marmoratus
WBGene00001497	fars-1	81	60.591	ENSLBEG00000001258	farsa	93	60.591	Labrus_bergylta
WBGene00001497	fars-1	94	62.737	ENSLBEG00000006757	-	96	62.737	Labrus_bergylta
WBGene00001497	fars-1	88	60.181	ENSLOCG00000008389	farsa	92	60.181	Lepisosteus_oculatus
WBGene00001497	fars-1	95	59.664	ENSLAFG00000016154	FARSA	94	59.664	Loxodonta_africana
WBGene00001497	fars-1	95	60.504	ENSMFAG00000030595	FARSA	94	60.504	Macaca_fascicularis
WBGene00001497	fars-1	95	60.504	ENSMMUG00000004390	FARSA	94	60.504	Macaca_mulatta
WBGene00001497	fars-1	95	60.504	ENSMNEG00000043866	FARSA	94	60.504	Macaca_nemestrina
WBGene00001497	fars-1	94	60.934	ENSMLEG00000029157	FARSA	93	60.934	Mandrillus_leucophaeus
WBGene00001497	fars-1	94	60.632	ENSMAMG00000010636	farsa	96	61.895	Mastacembelus_armatus
WBGene00001497	fars-1	94	63.158	ENSMZEG00005002319	farsa	96	63.158	Maylandia_zebra
WBGene00001497	fars-1	95	60.714	ENSMAUG00000009188	Farsa	94	60.714	Mesocricetus_auratus
WBGene00001497	fars-1	95	60.714	ENSMICG00000016272	FARSA	94	60.714	Microcebus_murinus
WBGene00001497	fars-1	95	60.294	ENSMOCG00000011399	Farsa	94	60.294	Microtus_ochrogaster
WBGene00001497	fars-1	94	58.861	ENSMMOG00000006287	farsa	96	58.861	Mola_mola
WBGene00001497	fars-1	95	61.975	ENSMODG00000011519	FARSA	96	61.975	Monodelphis_domestica
WBGene00001497	fars-1	90	62.555	ENSMALG00000001972	farsa	96	62.555	Monopterus_albus
WBGene00001497	fars-1	95	61.053	MGP_CAROLIEiJ_G0031312	Farsa	94	61.053	Mus_caroli
WBGene00001497	fars-1	95	61.263	ENSMUSG00000003808	Farsa	94	61.263	Mus_musculus
WBGene00001497	fars-1	95	60.842	MGP_PahariEiJ_G0022917	Farsa	94	60.842	Mus_pahari
WBGene00001497	fars-1	95	61.474	MGP_SPRETEiJ_G0032431	Farsa	94	61.474	Mus_spretus
WBGene00001497	fars-1	95	60.504	ENSMPUG00000004400	FARSA	94	60.504	Mustela_putorius_furo
WBGene00001497	fars-1	95	60.714	ENSMLUG00000012767	FARSA	94	60.714	Myotis_lucifugus
WBGene00001497	fars-1	72	64.208	ENSNGAG00000018353	Farsa	99	64.208	Nannospalax_galili
WBGene00001497	fars-1	94	62.737	ENSNBRG00000010063	farsa	96	62.737	Neolamprologus_brichardi
WBGene00001497	fars-1	95	60.714	ENSNLEG00000012899	FARSA	94	60.714	Nomascus_leucogenys
WBGene00001497	fars-1	98	61.711	ENSMEUG00000014253	FARSA	99	61.711	Notamacropus_eugenii
WBGene00001497	fars-1	95	60.504	ENSOPRG00000005004	FARSA	94	60.504	Ochotona_princeps
WBGene00001497	fars-1	95	60.714	ENSODEG00000010433	FARSA	94	60.714	Octodon_degus
WBGene00001497	fars-1	94	62.947	ENSONIG00000008075	farsa	96	62.947	Oreochromis_niloticus
WBGene00001497	fars-1	94	62.658	ENSORLG00000016406	farsa	93	59.454	Oryzias_latipes
WBGene00001497	fars-1	94	62.658	ENSORLG00020021978	farsa	96	62.658	Oryzias_latipes_hni
WBGene00001497	fars-1	94	62.869	ENSORLG00015015045	farsa	96	62.869	Oryzias_latipes_hsok
WBGene00001497	fars-1	94	61.814	ENSOMEG00000017367	farsa	93	61.814	Oryzias_melastigma
WBGene00001497	fars-1	97	58.896	ENSOGAG00000012243	FARSA	96	58.896	Otolemur_garnettii
WBGene00001497	fars-1	95	61.134	ENSOARG00000009991	FARSA	88	61.134	Ovis_aries
WBGene00001497	fars-1	95	60.504	ENSPPAG00000034266	FARSA	94	60.504	Pan_paniscus
WBGene00001497	fars-1	95	60.294	ENSPPRG00000000346	FARSA	94	60.294	Panthera_pardus
WBGene00001497	fars-1	91	61.354	ENSPTIG00000011502	FARSA	94	61.354	Panthera_tigris_altaica
WBGene00001497	fars-1	95	60.504	ENSPTRG00000010550	FARSA	94	60.504	Pan_troglodytes
WBGene00001497	fars-1	95	60.504	ENSPANG00000010978	FARSA	93	56.933	Papio_anubis
WBGene00001497	fars-1	94	61.814	ENSPKIG00000007170	farsa	96	61.814	Paramormyrops_kingsleyae
WBGene00001497	fars-1	89	57.623	ENSPSIG00000012701	FARSA	97	57.623	Pelodiscus_sinensis
WBGene00001497	fars-1	94	58.947	ENSPMGG00000001401	farsa	95	58.947	Periophthalmus_magnuspinnatus
WBGene00001497	fars-1	95	60.294	ENSPEMG00000012560	Farsa	94	60.294	Peromyscus_maniculatus_bairdii
WBGene00001497	fars-1	97	60.816	ENSPMAG00000008453	farsa	99	60.816	Petromyzon_marinus
WBGene00001497	fars-1	95	62.185	ENSPCIG00000019294	FARSA	96	62.185	Phascolarctos_cinereus
WBGene00001497	fars-1	94	62.316	ENSPFOG00000001201	farsa	96	62.316	Poecilia_formosa
WBGene00001497	fars-1	94	62.316	ENSPLAG00000018191	farsa	96	62.316	Poecilia_latipinna
WBGene00001497	fars-1	94	62.316	ENSPMEG00000013547	farsa	96	62.316	Poecilia_mexicana
WBGene00001497	fars-1	94	57.895	ENSPREG00000013620	farsa	95	57.895	Poecilia_reticulata
WBGene00001497	fars-1	95	60.504	ENSPPYG00000009615	FARSA	94	60.504	Pongo_abelii
WBGene00001497	fars-1	95	61.134	ENSPCAG00000015721	FARSA	94	61.134	Procavia_capensis
WBGene00001497	fars-1	95	60.924	ENSPCOG00000014412	FARSA	94	60.924	Propithecus_coquereli
WBGene00001497	fars-1	81	71.163	ENSPVAG00000014714	FARSA	80	71.163	Pteropus_vampyrus
WBGene00001497	fars-1	94	63.158	ENSPNYG00000002144	farsa	96	63.158	Pundamilia_nyererei
WBGene00001497	fars-1	94	61.895	ENSPNAG00000000869	farsa	96	61.895	Pygocentrus_nattereri
WBGene00001497	fars-1	97	59.918	ENSRNOG00000003149	Farsa	96	59.918	Rattus_norvegicus
WBGene00001497	fars-1	95	60.294	ENSRBIG00000025585	FARSA	94	62.785	Rhinopithecus_bieti
WBGene00001497	fars-1	95	60.294	ENSRROG00000040046	FARSA	92	57.843	Rhinopithecus_roxellana
WBGene00001497	fars-1	97	51.107	YFL022C	FRS2	98	50.704	Saccharomyces_cerevisiae
WBGene00001497	fars-1	95	60.084	ENSSBOG00000031362	FARSA	94	60.084	Saimiri_boliviensis_boliviensis
WBGene00001497	fars-1	87	64.384	ENSSHAG00000015006	FARSA	100	63.311	Sarcophilus_harrisii
WBGene00001497	fars-1	94	61.895	ENSSFOG00015014864	farsa	99	60.163	Scleropages_formosus
WBGene00001497	fars-1	94	62.316	ENSSMAG00000002358	farsa	96	62.316	Scophthalmus_maximus
WBGene00001497	fars-1	94	63.158	ENSSDUG00000008631	farsa	96	63.158	Seriola_dumerili
WBGene00001497	fars-1	94	63.368	ENSSLDG00000017108	farsa	96	63.368	Seriola_lalandi_dorsalis
WBGene00001497	fars-1	62	69.697	ENSSARG00000006579	-	64	69.697	Sorex_araneus
WBGene00001497	fars-1	88	53.515	ENSSPUG00000012509	FARSA	99	52.174	Sphenodon_punctatus
WBGene00001497	fars-1	95	62.185	ENSSPAG00000018292	farsa	88	62.185	Stegastes_partitus
WBGene00001497	fars-1	97	58.656	ENSSSCG00000013745	FARSA	97	58.656	Sus_scrofa
WBGene00001497	fars-1	94	56.118	ENSTRUG00000010624	farsa	97	55.556	Takifugu_rubripes
WBGene00001497	fars-1	97	59.016	ENSTNIG00000008330	farsa	98	59.016	Tetraodon_nigroviridis
WBGene00001497	fars-1	87	59.725	ENSTBEG00000000396	FARSA	95	59.268	Tupaia_belangeri
WBGene00001497	fars-1	81	69.697	ENSTTRG00000003599	FARSA	81	69.697	Tursiops_truncatus
WBGene00001497	fars-1	95	60.084	ENSUAMG00000010230	FARSA	94	60.084	Ursus_americanus
WBGene00001497	fars-1	95	60.084	ENSUMAG00000006110	FARSA	94	60.084	Ursus_maritimus
WBGene00001497	fars-1	95	60.504	ENSVVUG00000024145	FARSA	94	60.504	Vulpes_vulpes
WBGene00001497	fars-1	98	60.446	ENSXETG00000007936	farsa	99	60.446	Xenopus_tropicalis
WBGene00001497	fars-1	94	56.118	ENSXCOG00000015512	farsa	95	56.118	Xiphophorus_couchianus
WBGene00001497	fars-1	94	62.947	ENSXMAG00000008832	farsa	96	62.947	Xiphophorus_maculatus