EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001498 (Gene tree)
Gene ID: -
Gene Symbol: fars-3
Alias: -
Full Name: Phenylalanine--tRNA ligase beta subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 2225 bases
Position: chrII:8464848-8467072
Accession: Q19713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F22B5	B3_4	PF03483.17	3.5e-29	1	1
F22B5	B5	PF03484.15	3.3e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F22B5.9	-	1904	NM_063384	F22B5.9	591 (aa)	NP_495785	Q19713

Gene Model

Click here to download WBGene00001498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001498	fars-3	100	59.291	ENSG00000116120	FARSB	100	59.291	Homo_sapiens
WBGene00001498	fars-3	100	59.459	ENSAPOG00000013072	farsb	100	56.926	Acanthochromis_polyacanthus
WBGene00001498	fars-3	100	59.291	ENSAMEG00000005984	FARSB	100	59.291	Ailuropoda_melanoleuca
WBGene00001498	fars-3	100	55.912	ENSACIG00000021623	farsb	100	55.912	Amphilophus_citrinellus
WBGene00001498	fars-3	100	59.459	ENSAOCG00000004912	farsb	100	57.770	Amphiprion_ocellaris
WBGene00001498	fars-3	100	59.628	ENSAPEG00000001153	farsb	100	57.095	Amphiprion_percula
WBGene00001498	fars-3	100	58.446	ENSATEG00000021441	farsb	70	58.446	Anabas_testudineus
WBGene00001498	fars-3	97	58.813	ENSAPLG00000010292	FARSB	97	58.813	Anas_platyrhynchos
WBGene00001498	fars-3	100	57.939	ENSACAG00000004769	FARSB	98	57.939	Anolis_carolinensis
WBGene00001498	fars-3	100	59.291	ENSANAG00000024637	FARSB	100	59.291	Aotus_nancymaae
WBGene00001498	fars-3	100	59.122	ENSACLG00000013951	farsb	100	58.524	Astatotilapia_calliptera
WBGene00001498	fars-3	84	58.000	ENSAMXG00000033881	farsb	99	58.000	Astyanax_mexicanus
WBGene00001498	fars-3	96	59.612	ENSBTAG00000045523	-	100	59.612	Bos_taurus
WBGene00001498	fars-3	100	59.122	ENSBTAG00000011649	FARSB	100	59.122	Bos_taurus
WBGene00001498	fars-3	100	59.291	ENSCJAG00000012181	FARSB	100	59.291	Callithrix_jacchus
WBGene00001498	fars-3	100	59.291	ENSCAFG00000016094	-	100	59.291	Canis_familiaris
WBGene00001498	fars-3	100	57.504	ENSCAFG00020026684	FARSB	100	59.894	Canis_lupus_dingo
WBGene00001498	fars-3	100	59.291	ENSCHIG00000014275	FARSB	100	59.291	Capra_hircus
WBGene00001498	fars-3	100	58.446	ENSTSYG00000008461	FARSB	100	58.446	Carlito_syrichta
WBGene00001498	fars-3	93	54.448	ENSCAPG00000016436	FARSB	98	54.448	Cavia_aperea
WBGene00001498	fars-3	100	58.277	ENSCPOG00000013109	FARSB	100	58.277	Cavia_porcellus
WBGene00001498	fars-3	100	56.588	ENSCCAG00000025840	FARSB	100	56.588	Cebus_capucinus
WBGene00001498	fars-3	100	58.953	ENSCATG00000036168	FARSB	100	58.953	Cercocebus_atys
WBGene00001498	fars-3	100	58.784	ENSCLAG00000011954	FARSB	100	58.784	Chinchilla_lanigera
WBGene00001498	fars-3	100	58.953	ENSCSAG00000007806	FARSB	100	58.953	Chlorocebus_sabaeus
WBGene00001498	fars-3	81	56.555	ENSCHOG00000011785	FARSB	81	56.555	Choloepus_hoffmanni
WBGene00001498	fars-3	100	58.615	ENSCPBG00000019346	FARSB	98	58.615	Chrysemys_picta_bellii
WBGene00001498	fars-3	99	55.833	ENSCING00000004180	-	99	55.833	Ciona_intestinalis
WBGene00001498	fars-3	99	56.500	ENSCSAVG00000005346	-	99	56.500	Ciona_savignyi
WBGene00001498	fars-3	97	59.615	ENSCANG00000036239	FARSB	100	59.615	Colobus_angolensis_palliatus
WBGene00001498	fars-3	100	58.784	ENSCGRG00001022928	Farsb	100	58.784	Cricetulus_griseus_chok1gshd
WBGene00001498	fars-3	100	58.784	ENSCGRG00000001513	Farsb	100	58.784	Cricetulus_griseus_crigri
WBGene00001498	fars-3	100	58.277	ENSCSEG00000005415	farsb	100	55.473	Cynoglossus_semilaevis
WBGene00001498	fars-3	76	58.000	ENSCVAG00000018815	farsb	98	58.000	Cyprinodon_variegatus
WBGene00001498	fars-3	100	58.516	ENSDARG00000016864	farsb	100	58.516	Danio_rerio
WBGene00001498	fars-3	100	57.601	ENSDNOG00000002511	FARSB	100	57.601	Dasypus_novemcinctus
WBGene00001498	fars-3	100	58.615	ENSDORG00000011102	Farsb	100	58.615	Dipodomys_ordii
WBGene00001498	fars-3	100	57.143	FBgn0039175	beta-PheRS	100	57.143	Drosophila_melanogaster
WBGene00001498	fars-3	97	59.091	ENSETEG00000015080	FARSB	100	59.091	Echinops_telfairi
WBGene00001498	fars-3	100	53.885	ENSEBUG00000006846	farsb	100	53.885	Eptatretus_burgeri
WBGene00001498	fars-3	100	58.615	ENSEASG00005011297	FARSB	100	58.615	Equus_asinus_asinus
WBGene00001498	fars-3	100	56.770	ENSECAG00000023086	FARSB	99	58.974	Equus_caballus
WBGene00001498	fars-3	100	45.777	ENSEEUG00000007441	FARSB	100	45.777	Erinaceus_europaeus
WBGene00001498	fars-3	97	57.840	ENSELUG00000014767	farsb	99	57.840	Esox_lucius
WBGene00001498	fars-3	100	59.122	ENSFCAG00000026772	FARSB	100	59.122	Felis_catus
WBGene00001498	fars-3	97	58.362	ENSFALG00000006739	FARSB	97	58.362	Ficedula_albicollis
WBGene00001498	fars-3	100	58.784	ENSFDAG00000008871	FARSB	100	58.784	Fukomys_damarensis
WBGene00001498	fars-3	100	58.179	ENSFHEG00000020939	farsb	97	58.442	Fundulus_heteroclitus
WBGene00001498	fars-3	91	57.885	ENSGMOG00000013047	farsb	99	57.885	Gadus_morhua
WBGene00001498	fars-3	100	56.250	ENSGALG00000005236	FARSB	100	56.250	Gallus_gallus
WBGene00001498	fars-3	100	58.615	ENSGAFG00000020900	farsb	100	50.337	Gambusia_affinis
WBGene00001498	fars-3	92	59.225	ENSGACG00000000261	farsb	100	59.225	Gasterosteus_aculeatus
WBGene00001498	fars-3	100	59.122	ENSGAGG00000016575	FARSB	98	59.122	Gopherus_agassizii
WBGene00001498	fars-3	100	59.291	ENSHBUG00000022379	farsb	100	58.108	Haplochromis_burtoni
WBGene00001498	fars-3	100	58.615	ENSHGLG00000015965	FARSB	100	58.615	Heterocephalus_glaber_female
WBGene00001498	fars-3	100	58.615	ENSHGLG00100001035	FARSB	100	58.615	Heterocephalus_glaber_male
WBGene00001498	fars-3	91	54.545	ENSHCOG00000016462	farsb	100	54.545	Hippocampus_comes
WBGene00001498	fars-3	100	57.264	ENSIPUG00000002754	farsb	100	57.264	Ictalurus_punctatus
WBGene00001498	fars-3	100	59.628	ENSSTOG00000016169	FARSB	100	59.628	Ictidomys_tridecemlineatus
WBGene00001498	fars-3	100	57.939	ENSJJAG00000003267	Farsb	100	57.939	Jaculus_jaculus
WBGene00001498	fars-3	100	53.266	ENSKMAG00000005363	farsb	100	53.266	Kryptolebias_marmoratus
WBGene00001498	fars-3	100	58.277	ENSLBEG00000018127	farsb	70	58.277	Labrus_bergylta
WBGene00001498	fars-3	100	59.628	ENSLACG00000002551	FARSB	100	59.628	Latimeria_chalumnae
WBGene00001498	fars-3	100	58.615	ENSLOCG00000004136	farsb	100	58.615	Lepisosteus_oculatus
WBGene00001498	fars-3	100	59.122	ENSLAFG00000015659	FARSB	100	59.122	Loxodonta_africana
WBGene00001498	fars-3	100	58.784	ENSMFAG00000036645	FARSB	100	58.784	Macaca_fascicularis
WBGene00001498	fars-3	100	57.264	ENSMMUG00000007685	FARSB	100	57.264	Macaca_mulatta
WBGene00001498	fars-3	100	58.784	ENSMNEG00000030672	FARSB	100	58.784	Macaca_nemestrina
WBGene00001498	fars-3	100	58.953	ENSMLEG00000042060	FARSB	100	58.953	Mandrillus_leucophaeus
WBGene00001498	fars-3	100	58.615	ENSMAMG00000011835	farsb	100	54.730	Mastacembelus_armatus
WBGene00001498	fars-3	96	58.451	ENSMZEG00005004544	farsb	100	58.451	Maylandia_zebra
WBGene00001498	fars-3	95	56.228	ENSMGAG00000004670	FARSB	100	56.228	Meleagris_gallopavo
WBGene00001498	fars-3	71	65.517	ENSMAUG00000017805	Farsb	99	65.517	Mesocricetus_auratus
WBGene00001498	fars-3	100	59.966	ENSMICG00000002495	FARSB	100	59.966	Microcebus_murinus
WBGene00001498	fars-3	100	58.784	ENSMOCG00000003181	Farsb	100	58.784	Microtus_ochrogaster
WBGene00001498	fars-3	100	54.561	ENSMMOG00000006265	farsb	100	54.561	Mola_mola
WBGene00001498	fars-3	100	58.953	ENSMODG00000021192	FARSB	100	58.953	Monodelphis_domestica
WBGene00001498	fars-3	100	51.174	ENSMALG00000021188	farsb	100	51.174	Monopterus_albus
WBGene00001498	fars-3	100	59.191	MGP_CAROLIEiJ_G0014310	Farsb	100	62.185	Mus_caroli
WBGene00001498	fars-3	100	59.022	ENSMUSG00000026245	Farsb	100	61.345	Mus_musculus
WBGene00001498	fars-3	100	59.022	MGP_PahariEiJ_G0027548	Farsb	100	61.765	Mus_pahari
WBGene00001498	fars-3	100	59.022	MGP_SPRETEiJ_G0015116	Farsb	100	61.765	Mus_spretus
WBGene00001498	fars-3	100	58.953	ENSMPUG00000016677	FARSB	100	58.953	Mustela_putorius_furo
WBGene00001498	fars-3	100	58.784	ENSMLUG00000010904	FARSB	100	58.784	Myotis_lucifugus
WBGene00001498	fars-3	100	58.108	ENSNGAG00000014602	Farsb	100	58.108	Nannospalax_galili
WBGene00001498	fars-3	100	59.122	ENSNBRG00000003198	farsb	100	56.757	Neolamprologus_brichardi
WBGene00001498	fars-3	100	59.122	ENSNLEG00000009638	FARSB	100	59.122	Nomascus_leucogenys
WBGene00001498	fars-3	100	50.676	ENSMEUG00000010798	FARSB	100	50.676	Notamacropus_eugenii
WBGene00001498	fars-3	89	48.843	ENSOPRG00000003292	FARSB	89	48.843	Ochotona_princeps
WBGene00001498	fars-3	100	58.446	ENSODEG00000005451	FARSB	100	58.446	Octodon_degus
WBGene00001498	fars-3	100	59.122	ENSONIG00000014639	farsb	100	59.122	Oreochromis_niloticus
WBGene00001498	fars-3	91	57.435	ENSOANG00000015387	FARSB	100	57.435	Ornithorhynchus_anatinus
WBGene00001498	fars-3	91	59.369	ENSOCUG00000007828	FARSB	94	59.369	Oryctolagus_cuniculus
WBGene00001498	fars-3	100	58.853	ENSORLG00000009135	farsb	100	56.661	Oryzias_latipes
WBGene00001498	fars-3	100	58.685	ENSORLG00015001072	farsb	100	50.505	Oryzias_latipes_hsok
WBGene00001498	fars-3	100	59.191	ENSOMEG00000019009	farsb	100	55.872	Oryzias_melastigma
WBGene00001498	fars-3	100	55.000	ENSOGAG00000010125	FARSB	100	55.000	Otolemur_garnettii
WBGene00001498	fars-3	100	59.291	ENSOARG00000020329	FARSB	100	59.291	Ovis_aries
WBGene00001498	fars-3	100	59.459	ENSPPAG00000039268	FARSB	100	60.366	Pan_paniscus
WBGene00001498	fars-3	100	58.953	ENSPPRG00000010687	FARSB	100	58.953	Panthera_pardus
WBGene00001498	fars-3	100	58.953	ENSPTIG00000004299	FARSB	100	58.953	Panthera_tigris_altaica
WBGene00001498	fars-3	100	59.459	ENSPTRG00000012974	FARSB	100	59.459	Pan_troglodytes
WBGene00001498	fars-3	100	58.953	ENSPANG00000016304	FARSB	100	58.953	Papio_anubis
WBGene00001498	fars-3	100	57.022	ENSPKIG00000006661	farsb	100	57.022	Paramormyrops_kingsleyae
WBGene00001498	fars-3	99	58.603	ENSPSIG00000006248	FARSB	99	58.603	Pelodiscus_sinensis
WBGene00001498	fars-3	82	59.877	ENSPMGG00000002815	farsb	99	59.877	Periophthalmus_magnuspinnatus
WBGene00001498	fars-3	100	58.784	ENSPEMG00000003131	Farsb	100	58.784	Peromyscus_maniculatus_bairdii
WBGene00001498	fars-3	100	58.277	ENSPCIG00000019458	FARSB	100	58.277	Phascolarctos_cinereus
WBGene00001498	fars-3	100	58.615	ENSPLAG00000001104	farsb	100	53.697	Poecilia_latipinna
WBGene00001498	fars-3	100	58.615	ENSPMEG00000017658	farsb	100	53.697	Poecilia_mexicana
WBGene00001498	fars-3	100	58.784	ENSPREG00000010583	farsb	100	53.716	Poecilia_reticulata
WBGene00001498	fars-3	100	59.122	ENSPPYG00000013221	FARSB	100	59.122	Pongo_abelii
WBGene00001498	fars-3	84	54.509	ENSPCAG00000002757	FARSB	84	54.509	Procavia_capensis
WBGene00001498	fars-3	67	55.556	ENSPCOG00000028852	FARSB	100	55.556	Propithecus_coquereli
WBGene00001498	fars-3	100	58.108	ENSPVAG00000006985	FARSB	100	58.108	Pteropus_vampyrus
WBGene00001498	fars-3	100	48.649	ENSPNYG00000011433	farsb	100	48.649	Pundamilia_nyererei
WBGene00001498	fars-3	100	57.601	ENSPNAG00000021802	farsb	100	57.601	Pygocentrus_nattereri
WBGene00001498	fars-3	100	58.853	ENSRNOG00000014119	Farsb	100	58.853	Rattus_norvegicus
WBGene00001498	fars-3	92	59.232	ENSRBIG00000033191	FARSB	97	59.191	Rhinopithecus_bieti
WBGene00001498	fars-3	100	58.953	ENSRROG00000029388	FARSB	100	58.953	Rhinopithecus_roxellana
WBGene00001498	fars-3	100	46.557	YLR060W	FRS1	100	46.557	Saccharomyces_cerevisiae
WBGene00001498	fars-3	100	52.703	ENSSBOG00000019084	FARSB	100	52.703	Saimiri_boliviensis_boliviensis
WBGene00001498	fars-3	91	54.727	ENSSHAG00000015752	FARSB	99	54.727	Sarcophilus_harrisii
WBGene00001498	fars-3	100	56.176	ENSSFOG00015007850	farsb	100	56.176	Scleropages_formosus
WBGene00001498	fars-3	100	58.446	ENSSMAG00000020668	farsb	100	57.264	Scophthalmus_maximus
WBGene00001498	fars-3	100	58.446	ENSSDUG00000009685	farsb	100	55.444	Seriola_dumerili
WBGene00001498	fars-3	100	58.615	ENSSLDG00000025206	farsb	100	56.419	Seriola_lalandi_dorsalis
WBGene00001498	fars-3	59	61.905	ENSSARG00000005655	-	65	61.905	Sorex_araneus
WBGene00001498	fars-3	95	55.496	ENSSPUG00000002245	FARSB	100	55.496	Sphenodon_punctatus
WBGene00001498	fars-3	100	57.770	ENSSPAG00000007367	farsb	69	57.770	Stegastes_partitus
WBGene00001498	fars-3	100	54.730	ENSSSCG00000032016	-	100	54.730	Sus_scrofa
WBGene00001498	fars-3	100	59.122	ENSSSCG00000016226	-	100	59.122	Sus_scrofa
WBGene00001498	fars-3	97	58.537	ENSTGUG00000007788	FARSB	100	58.537	Taeniopygia_guttata
WBGene00001498	fars-3	100	57.432	ENSTRUG00000009483	farsb	70	57.432	Takifugu_rubripes
WBGene00001498	fars-3	100	56.757	ENSTNIG00000014310	farsb	100	56.757	Tetraodon_nigroviridis
WBGene00001498	fars-3	100	37.838	ENSTBEG00000003136	FARSB	100	37.838	Tupaia_belangeri
WBGene00001498	fars-3	88	60.500	ENSTTRG00000009082	FARSB	88	60.500	Tursiops_truncatus
WBGene00001498	fars-3	87	56.950	ENSUAMG00000024613	FARSB	99	57.455	Ursus_americanus
WBGene00001498	fars-3	100	58.953	ENSUMAG00000017995	FARSB	100	58.953	Ursus_maritimus
WBGene00001498	fars-3	91	56.906	ENSVPAG00000006844	FARSB	100	56.906	Vicugna_pacos
WBGene00001498	fars-3	100	59.459	ENSVVUG00000024025	FARSB	100	59.459	Vulpes_vulpes
WBGene00001498	fars-3	100	58.010	ENSXETG00000002934	farsb	100	58.010	Xenopus_tropicalis
WBGene00001498	fars-3	100	57.939	ENSXMAG00000008280	farsb	100	52.196	Xiphophorus_maculatus