EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00001598 (Gene tree)
Gene ID: -
Gene Symbol: glh-1
Alias: -
Full Name: ATP-dependent RNA helicase glh-1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 2842 bases
Position: chrI:6854688-6857529
Accession: P34689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T21G5	zf-CCHC	PF00098.23	2e-26	1	4
T21G5	zf-CCHC	PF00098.23	2e-26	2	4
T21G5	zf-CCHC	PF00098.23	2e-26	3	4
T21G5	zf-CCHC	PF00098.23	2e-26	4	4
T21G5	ResIII	PF04851.15	1.8e-06	1	1
T21G5	DEAD	PF00270.29	2.6e-43	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T21G5.3	-	2552	NM_059562	T21G5.3	763 (aa)	NP_491963	P34689

Gene Model

Click here to download WBGene00001598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001598	glh-1	54	35.681	WBGene00019245	sacy-1	64	35.681
WBGene00001598	glh-1	98	87.398	WBGene00001599	glh-2	62	87.356
WBGene00001598	glh-1	53	33.649	WBGene00013214	Y54G11A.3	79	33.493
WBGene00001598	glh-1	73	65.901	WBGene00001600	glh-3	72	69.157
WBGene00001598	glh-1	56	42.334	WBGene00002244	laf-1	65	42.105
WBGene00001598	glh-1	54	34.515	WBGene00008119	C46F11.4	50	34.579
WBGene00001598	glh-1	53	34.069	WBGene00022148	ddx-27	52	34.069
WBGene00001598	glh-1	51	32.850	WBGene00017162	ddx-23	55	32.850
WBGene00001598	glh-1	58	38.581	WBGene00006888	vbh-1	68	38.581
WBGene00001598	glh-1	53	31.204	WBGene00018007	F33D11.10	93	31.281
WBGene00001598	glh-1	53	31.450	WBGene00022029	Y65B4A.6	93	31.527
WBGene00001598	glh-1	50	31.429	WBGene00002083	inf-1	89	31.593
WBGene00001598	glh-1	54	36.341	WBGene00010260	ddx-17	70	36.341

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001598	glh-1	70	40.296	ENSG00000152670	DDX4	79	43.284	Homo_sapiens
WBGene00001598	glh-1	60	43.640	ENSAMEG00000013960	DDX4	65	42.418	Ailuropoda_melanoleuca
WBGene00001598	glh-1	59	44.124	ENSAPLG00000011662	DDX4	98	44.592	Anas_platyrhynchos
WBGene00001598	glh-1	59	44.273	ENSACAG00000014951	DDX4	63	44.298	Anolis_carolinensis
WBGene00001598	glh-1	89	36.134	ENSANAG00000029060	DDX4	75	39.177	Aotus_nancymaae
WBGene00001598	glh-1	60	44.348	ENSACLG00000007422	ddx4	74	43.913	Astatotilapia_calliptera
WBGene00001598	glh-1	60	45.870	ENSAMXG00000010288	ddx4	68	45.435	Astyanax_mexicanus
WBGene00001598	glh-1	60	43.573	ENSBTAG00000008871	DDX4	68	42.857	Bos_taurus
WBGene00001598	glh-1	60	43.231	ENSCJAG00000001951	DDX4	79	43.070	Callithrix_jacchus
WBGene00001598	glh-1	61	43.562	ENSCAFG00000006875	DDX4	64	43.006	Canis_familiaris
WBGene00001598	glh-1	61	43.562	ENSCAFG00020024295	DDX4	70	43.006	Canis_lupus_dingo
WBGene00001598	glh-1	60	43.573	ENSCHIG00000015567	DDX4	65	42.857	Capra_hircus
WBGene00001598	glh-1	62	41.948	ENSTSYG00000011848	DDX4	85	42.116	Carlito_syrichta
WBGene00001598	glh-1	87	36.593	ENSCCAG00000028725	DDX4	67	42.418	Cebus_capucinus
WBGene00001598	glh-1	70	40.296	ENSCATG00000044303	DDX4	79	43.284	Cercocebus_atys
WBGene00001598	glh-1	63	41.961	ENSCLAG00000005386	DDX4	70	41.961	Chinchilla_lanigera
WBGene00001598	glh-1	60	43.573	ENSCSAG00000016336	DDX4	62	43.220	Chlorocebus_sabaeus
WBGene00001598	glh-1	54	45.946	ENSCHOG00000000200	DDX4	62	39.872	Choloepus_hoffmanni
WBGene00001598	glh-1	61	44.894	ENSCPBG00000026547	DDX4	77	44.820	Chrysemys_picta_bellii
WBGene00001598	glh-1	67	41.336	ENSCING00000001412	-	88	41.544	Ciona_intestinalis
WBGene00001598	glh-1	85	39.187	ENSCSAVG00000004304	-	92	38.679	Ciona_savignyi
WBGene00001598	glh-1	60	39.696	ENSCANG00000003129	DDX4	77	39.659	Colobus_angolensis_palliatus
WBGene00001598	glh-1	61	43.284	ENSCGRG00001014961	Ddx4	64	43.534	Cricetulus_griseus_chok1gshd
WBGene00001598	glh-1	61	43.284	ENSCGRG00000001251	Ddx4	64	43.534	Cricetulus_griseus_crigri
WBGene00001598	glh-1	60	39.400	ENSCSEG00000006039	ddx4	77	37.500	Cynoglossus_semilaevis
WBGene00001598	glh-1	61	44.540	ENSDARG00000014373	ddx4	66	44.540	Danio_rerio
WBGene00001598	glh-1	61	41.151	ENSDNOG00000011658	DDX4	65	41.151	Dasypus_novemcinctus
WBGene00001598	glh-1	60	43.860	ENSDORG00000012201	Ddx4	67	42.623	Dipodomys_ordii
WBGene00001598	glh-1	60	43.897	FBgn0283442	vas	66	44.252	Drosophila_melanogaster
WBGene00001598	glh-1	56	44.186	ENSEBUG00000003290	-	84	44.186	Eptatretus_burgeri
WBGene00001598	glh-1	74	38.514	ENSEASG00005012143	DDX4	82	38.648	Equus_asinus_asinus
WBGene00001598	glh-1	71	39.719	ENSECAG00000023616	DDX4	76	41.468	Equus_caballus
WBGene00001598	glh-1	51	46.667	ENSEEUG00000012462	DDX4	52	46.667	Erinaceus_europaeus
WBGene00001598	glh-1	64	43.967	ENSELUG00000017328	ddx4	80	42.173	Esox_lucius
WBGene00001598	glh-1	62	41.750	ENSFCAG00000012560	DDX4	86	41.700	Felis_catus
WBGene00001598	glh-1	60	42.516	ENSFALG00000010910	DDX4	62	42.083	Ficedula_albicollis
WBGene00001598	glh-1	64	41.040	ENSFDAG00000003703	DDX4	72	40.918	Fukomys_damarensis
WBGene00001598	glh-1	62	44.000	ENSFHEG00000019935	ddx4	79	42.664	Fundulus_heteroclitus
WBGene00001598	glh-1	59	44.150	ENSGALG00000014713	DDX4	66	44.150	Gallus_gallus
WBGene00001598	glh-1	61	44.206	ENSGAFG00000016509	ddx4	78	42.524	Gambusia_affinis
WBGene00001598	glh-1	60	43.939	ENSGACG00000015323	ddx4	92	43.506	Gasterosteus_aculeatus
WBGene00001598	glh-1	60	43.384	ENSGGOG00000002439	DDX4	79	43.284	Gorilla_gorilla
WBGene00001598	glh-1	60	44.565	ENSHBUG00000001897	ddx4	75	44.130	Haplochromis_burtoni
WBGene00001598	glh-1	61	40.299	ENSHGLG00000003594	DDX4	62	40.299	Heterocephalus_glaber_female
WBGene00001598	glh-1	63	44.191	ENSHCOG00000018337	ddx4	77	44.025	Hippocampus_comes
WBGene00001598	glh-1	60	44.708	ENSIPUG00000001845	ddx4	74	44.516	Ictalurus_punctatus
WBGene00001598	glh-1	62	41.071	ENSSTOG00000021044	DDX4	72	40.727	Ictidomys_tridecemlineatus
WBGene00001598	glh-1	61	43.534	ENSJJAG00000015867	Ddx4	67	42.562	Jaculus_jaculus
WBGene00001598	glh-1	63	43.558	ENSKMAG00000012439	ddx4	76	40.741	Kryptolebias_marmoratus
WBGene00001598	glh-1	60	43.791	ENSLOCG00000010887	ddx4	92	43.791	Lepisosteus_oculatus
WBGene00001598	glh-1	60	42.795	ENSLAFG00000005900	DDX4	64	42.796	Loxodonta_africana
WBGene00001598	glh-1	70	40.296	ENSMFAG00000040186	DDX4	79	43.284	Macaca_fascicularis
WBGene00001598	glh-1	70	40.296	ENSMMUG00000017386	DDX4	79	43.284	Macaca_mulatta
WBGene00001598	glh-1	70	40.296	ENSMNEG00000033343	DDX4	79	43.284	Macaca_nemestrina
WBGene00001598	glh-1	60	40.564	ENSMLEG00000038233	DDX4	81	40.512	Mandrillus_leucophaeus
WBGene00001598	glh-1	60	44.348	ENSMZEG00005019116	ddx4	77	43.913	Maylandia_zebra
WBGene00001598	glh-1	60	38.841	ENSMAUG00000019873	Ddx4	65	38.793	Mesocricetus_auratus
WBGene00001598	glh-1	60	34.286	ENSMICG00000028132	-	68	34.177	Microcebus_murinus
WBGene00001598	glh-1	60	43.860	ENSMICG00000008994	-	85	42.032	Microcebus_murinus
WBGene00001598	glh-1	61	43.284	ENSMOCG00000013250	Ddx4	67	42.562	Microtus_ochrogaster
WBGene00001598	glh-1	62	43.606	ENSMMOG00000004689	ddx4	82	43.187	Mola_mola
WBGene00001598	glh-1	60	43.013	ENSMODG00000019511	DDX4	61	43.013	Monodelphis_domestica
WBGene00001598	glh-1	61	43.070	MGP_CAROLIEiJ_G0018893	Ddx4	64	43.226	Mus_caroli
WBGene00001598	glh-1	61	43.070	ENSMUSG00000021758	Ddx4	65	42.979	Mus_musculus
WBGene00001598	glh-1	61	43.284	MGP_PahariEiJ_G0015964	Ddx4	64	43.441	Mus_pahari
WBGene00001598	glh-1	61	43.284	MGP_SPRETEiJ_G0019772	Ddx4	64	43.441	Mus_spretus
WBGene00001598	glh-1	61	42.918	ENSMPUG00000007596	DDX4	65	42.008	Mustela_putorius_furo
WBGene00001598	glh-1	61	43.777	ENSMLUG00000001189	DDX4	62	43.777	Myotis_lucifugus
WBGene00001598	glh-1	61	42.581	ENSNGAG00000013259	Ddx4	64	42.581	Nannospalax_galili
WBGene00001598	glh-1	63	42.449	ENSNBRG00000014442	ddx4	90	41.711	Neolamprologus_brichardi
WBGene00001598	glh-1	70	40.364	ENSNLEG00000001662	DDX4	78	43.070	Nomascus_leucogenys
WBGene00001598	glh-1	62	41.071	ENSODEG00000003839	-	74	41.071	Octodon_degus
WBGene00001598	glh-1	62	41.750	ENSODEG00000016951	-	69	41.750	Octodon_degus
WBGene00001598	glh-1	57	44.266	ENSONIG00000012063	ddx4	91	42.826	Oreochromis_niloticus
WBGene00001598	glh-1	60	43.668	ENSOCUG00000008597	DDX4	64	42.769	Oryctolagus_cuniculus
WBGene00001598	glh-1	62	44.421	ENSORLG00000020672	ddx4	73	45.064	Oryzias_latipes
WBGene00001598	glh-1	62	44.421	ENSORLG00020014206	ddx4	72	45.064	Oryzias_latipes_hni
WBGene00001598	glh-1	62	44.632	ENSORLG00015016600	ddx4	73	45.279	Oryzias_latipes_hsok
WBGene00001598	glh-1	62	45.263	ENSOMEG00000010651	ddx4	77	44.948	Oryzias_melastigma
WBGene00001598	glh-1	60	43.231	ENSOGAG00000007588	DDX4	63	42.526	Otolemur_garnettii
WBGene00001598	glh-1	60	43.573	ENSOARG00000007644	DDX4	63	42.857	Ovis_aries
WBGene00001598	glh-1	70	40.296	ENSPPAG00000033915	DDX4	79	43.284	Pan_paniscus
WBGene00001598	glh-1	62	41.750	ENSPPRG00000011417	DDX4	73	40.962	Panthera_pardus
WBGene00001598	glh-1	62	41.551	ENSPTIG00000007748	DDX4	84	39.526	Panthera_tigris_altaica
WBGene00001598	glh-1	70	40.296	ENSPTRG00000016884	DDX4	79	43.284	Pan_troglodytes
WBGene00001598	glh-1	60	43.384	ENSPANG00000010945	DDX4	78	43.534	Papio_anubis
WBGene00001598	glh-1	70	41.220	ENSPSIG00000017179	DDX4	73	43.803	Pelodiscus_sinensis
WBGene00001598	glh-1	61	43.497	ENSPEMG00000010086	Ddx4	67	42.769	Peromyscus_maniculatus_bairdii
WBGene00001598	glh-1	60	43.231	ENSPCIG00000024758	DDX4	67	43.231	Phascolarctos_cinereus
WBGene00001598	glh-1	61	43.562	ENSPFOG00000018842	ddx4	76	42.520	Poecilia_formosa
WBGene00001598	glh-1	61	43.562	ENSPLAG00000020726	ddx4	76	42.520	Poecilia_latipinna
WBGene00001598	glh-1	61	43.562	ENSPMEG00000002976	ddx4	79	42.520	Poecilia_mexicana
WBGene00001598	glh-1	61	43.562	ENSPREG00000017840	ddx4	81	42.085	Poecilia_reticulata
WBGene00001598	glh-1	60	43.384	ENSPPYG00000015472	DDX4	64	42.562	Pongo_abelii
WBGene00001598	glh-1	54	44.203	ENSPCAG00000002675	DDX4	57	44.076	Procavia_capensis
WBGene00001598	glh-1	62	41.551	ENSPVAG00000002448	DDX4	71	41.085	Pteropus_vampyrus
WBGene00001598	glh-1	60	44.348	ENSPNYG00000022212	ddx4	84	41.584	Pundamilia_nyererei
WBGene00001598	glh-1	57	45.995	ENSPNAG00000003686	ddx4	67	45.538	Pygocentrus_nattereri
WBGene00001598	glh-1	61	43.070	ENSRNOG00000026686	Ddx4	66	42.355	Rattus_norvegicus
WBGene00001598	glh-1	73	39.182	ENSRBIG00000028795	DDX4	85	41.815	Rhinopithecus_bieti
WBGene00001598	glh-1	63	41.815	ENSRROG00000045392	DDX4	85	41.815	Rhinopithecus_roxellana
WBGene00001598	glh-1	56	40.961	YPL119C	DBP1	71	40.929	Saccharomyces_cerevisiae
WBGene00001598	glh-1	89	35.556	ENSSBOG00000035231	DDX4	75	39.279	Saimiri_boliviensis_boliviensis
WBGene00001598	glh-1	60	43.013	ENSSHAG00000009132	DDX4	62	43.013	Sarcophilus_harrisii
WBGene00001598	glh-1	61	45.259	ENSSFOG00015006531	ddx4	70	45.356	Scleropages_formosus
WBGene00001598	glh-1	61	44.280	ENSSMAG00000009800	ddx4	75	43.030	Scophthalmus_maximus
WBGene00001598	glh-1	61	44.915	ENSSDUG00000022015	ddx4	74	44.215	Seriola_dumerili
WBGene00001598	glh-1	54	43.807	ENSSARG00000004206	DDX4	58	43.807	Sorex_araneus
WBGene00001598	glh-1	60	45.752	ENSSPUG00000007260	DDX4	76	45.752	Sphenodon_punctatus
WBGene00001598	glh-1	61	43.750	ENSSSCG00000016913	DDX4	64	42.857	Sus_scrofa
WBGene00001598	glh-1	59	43.046	ENSTGUG00000002548	DDX4	99	43.267	Taeniopygia_guttata
WBGene00001598	glh-1	59	41.037	ENSTNIG00000014474	ddx4	86	39.448	Tetraodon_nigroviridis
WBGene00001598	glh-1	63	42.589	ENSTTRG00000009316	DDX4	65	42.355	Tursiops_truncatus
WBGene00001598	glh-1	62	41.700	ENSUAMG00000023028	DDX4	87	37.829	Ursus_americanus
WBGene00001598	glh-1	62	41.700	ENSUMAG00000009291	DDX4	87	37.829	Ursus_maritimus
WBGene00001598	glh-1	62	42.737	ENSVPAG00000009491	DDX4	65	42.418	Vicugna_pacos
WBGene00001598	glh-1	61	43.562	ENSVVUG00000021369	DDX4	67	43.006	Vulpes_vulpes
WBGene00001598	glh-1	83	36.711	ENSXETG00000030832	DDX4	82	40.789	Xenopus_tropicalis
WBGene00001598	glh-1	63	43.299	ENSXMAG00000009677	ddx4	82	42.278	Xiphophorus_maculatus