EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00001600 (Gene tree)
Gene ID: -
Gene Symbol: glh-3
Alias: -
Full Name: ATP-dependent RNA helicase glh-3
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 2791 bases
Position: chrI:5792324-5795114
Accession: O01836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
B0414	zf-CCHC	PF00098.23	1.5e-08	1	2
B0414	zf-CCHC	PF00098.23	1.5e-08	2	2
B0414	ResIII	PF04851.15	1.3e-07	1	1
B0414	DEAD	PF00270.29	1.4e-44	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
B0414.6	-	2493	NM_059280	B0414.6	720 (aa)	NP_491681	O01836

Gene Model

Click here to download WBGene00001600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001600	glh-3	72	69.157	WBGene00001598	glh-1	73	65.901
WBGene00001600	glh-3	72	68.774	WBGene00001599	glh-2	67	57.997
WBGene00001600	glh-3	53	32.454	WBGene00018007	F33D11.10	88	32.454
WBGene00001600	glh-3	60	34.396	WBGene00010260	ddx-17	74	34.703
WBGene00001600	glh-3	55	30.446	WBGene00015232	B0511.6	64	31.467
WBGene00001600	glh-3	56	33.659	WBGene00013214	Y54G11A.3	78	33.659
WBGene00001600	glh-3	53	30.990	WBGene00002083	inf-1	88	30.990
WBGene00001600	glh-3	56	34.550	WBGene00019245	sacy-1	62	34.550
WBGene00001600	glh-3	61	39.911	WBGene00002244	laf-1	67	39.690
WBGene00001600	glh-3	60	38.128	WBGene00006888	vbh-1	71	36.632
WBGene00001600	glh-3	54	32.446	WBGene00017162	ddx-23	55	32.446
WBGene00001600	glh-3	55	32.494	WBGene00022029	Y65B4A.6	92	32.494
WBGene00001600	glh-3	57	32.126	WBGene00022148	ddx-27	52	32.126
WBGene00001600	glh-3	52	32.267	WBGene00012059	T26G10.1	71	32.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001600	glh-3	81	36.728	ENSG00000152670	DDX4	82	36.728	Homo_sapiens
WBGene00001600	glh-3	50	41.667	ENSAPOG00000021394	ddx4	86	41.667	Acanthochromis_polyacanthus
WBGene00001600	glh-3	66	40.717	ENSAMEG00000013960	DDX4	63	40.541	Ailuropoda_melanoleuca
WBGene00001600	glh-3	51	45.528	ENSACIG00000017623	ddx4	89	45.528	Amphilophus_citrinellus
WBGene00001600	glh-3	50	44.722	ENSAPEG00000008490	ddx4	87	44.722	Amphiprion_percula
WBGene00001600	glh-3	51	45.257	ENSATEG00000011704	ddx4	90	45.257	Anabas_testudineus
WBGene00001600	glh-3	63	42.325	ENSAPLG00000011662	DDX4	99	42.576	Anas_platyrhynchos
WBGene00001600	glh-3	65	42.128	ENSACAG00000014951	DDX4	65	42.128	Anolis_carolinensis
WBGene00001600	glh-3	95	33.866	ENSANAG00000029060	DDX4	93	34.150	Aotus_nancymaae
WBGene00001600	glh-3	64	41.685	ENSACLG00000007422	ddx4	73	41.685	Astatotilapia_calliptera
WBGene00001600	glh-3	62	43.207	ENSAMXG00000010288	ddx4	66	43.207	Astyanax_mexicanus
WBGene00001600	glh-3	65	41.328	ENSBTAG00000008871	DDX4	67	41.328	Bos_taurus
WBGene00001600	glh-3	64	40.998	ENSCJAG00000001951	DDX4	77	40.998	Callithrix_jacchus
WBGene00001600	glh-3	65	41.113	ENSCAFG00000006875	DDX4	69	39.114	Canis_familiaris
WBGene00001600	glh-3	65	41.113	ENSCAFG00020024295	DDX4	68	41.113	Canis_lupus_dingo
WBGene00001600	glh-3	65	41.113	ENSCHIG00000015567	DDX4	64	40.928	Capra_hircus
WBGene00001600	glh-3	63	42.198	ENSTSYG00000011848	DDX4	77	42.198	Carlito_syrichta
WBGene00001600	glh-3	50	40.616	ENSCPOG00000004327	DDX4	51	40.616	Cavia_porcellus
WBGene00001600	glh-3	65	41.113	ENSCCAG00000028725	DDX4	65	41.113	Cebus_capucinus
WBGene00001600	glh-3	78	37.411	ENSCATG00000044303	DDX4	76	41.758	Cercocebus_atys
WBGene00001600	glh-3	64	41.739	ENSCLAG00000005386	DDX4	63	41.739	Chinchilla_lanigera
WBGene00001600	glh-3	63	41.758	ENSCSAG00000016336	DDX4	60	41.758	Chlorocebus_sabaeus
WBGene00001600	glh-3	56	40.394	ENSCHOG00000000200	DDX4	62	37.657	Choloepus_hoffmanni
WBGene00001600	glh-3	66	42.449	ENSCPBG00000026547	DDX4	80	42.449	Chrysemys_picta_bellii
WBGene00001600	glh-3	68	38.742	ENSCING00000001412	-	88	36.969	Ciona_intestinalis
WBGene00001600	glh-3	71	38.402	ENSCSAVG00000004304	-	81	38.068	Ciona_savignyi
WBGene00001600	glh-3	63	38.242	ENSCANG00000003129	DDX4	74	38.242	Colobus_angolensis_palliatus
WBGene00001600	glh-3	65	41.416	ENSCGRG00001014961	Ddx4	64	41.432	Cricetulus_griseus_chok1gshd
WBGene00001600	glh-3	65	41.416	ENSCGRG00000001251	Ddx4	64	41.432	Cricetulus_griseus_crigri
WBGene00001600	glh-3	63	38.681	ENSCSEG00000006039	ddx4	66	38.593	Cynoglossus_semilaevis
WBGene00001600	glh-3	59	43.396	ENSDARG00000014373	ddx4	63	42.762	Danio_rerio
WBGene00001600	glh-3	63	39.825	ENSDNOG00000011658	DDX4	63	39.825	Dasypus_novemcinctus
WBGene00001600	glh-3	66	40.928	ENSDORG00000012201	Ddx4	65	40.928	Dipodomys_ordii
WBGene00001600	glh-3	62	41.871	FBgn0283442	vas	64	41.871	Drosophila_melanogaster
WBGene00001600	glh-3	60	44.316	ENSEBUG00000003290	-	84	44.316	Eptatretus_burgeri
WBGene00001600	glh-3	86	35.499	ENSEASG00005012143	DDX4	88	35.669	Equus_asinus_asinus
WBGene00001600	glh-3	85	36.935	ENSECAG00000023616	DDX4	87	36.935	Equus_caballus
WBGene00001600	glh-3	54	42.564	ENSEEUG00000012462	DDX4	52	42.564	Erinaceus_europaeus
WBGene00001600	glh-3	65	42.366	ENSELUG00000017328	ddx4	72	40.984	Esox_lucius
WBGene00001600	glh-3	65	41.139	ENSFCAG00000012560	DDX4	79	41.139	Felis_catus
WBGene00001600	glh-3	62	40.980	ENSFALG00000010910	DDX4	58	40.980	Ficedula_albicollis
WBGene00001600	glh-3	64	41.957	ENSFDAG00000003703	DDX4	63	41.957	Fukomys_damarensis
WBGene00001600	glh-3	64	42.489	ENSFHEG00000019935	ddx4	71	42.489	Fundulus_heteroclitus
WBGene00001600	glh-3	83	37.480	ENSGALG00000014713	DDX4	87	37.480	Gallus_gallus
WBGene00001600	glh-3	65	42.072	ENSGAFG00000016509	ddx4	71	42.072	Gambusia_affinis
WBGene00001600	glh-3	64	41.176	ENSGACG00000015323	ddx4	92	41.176	Gasterosteus_aculeatus
WBGene00001600	glh-3	81	36.711	ENSGGOG00000002439	DDX4	76	41.758	Gorilla_gorilla
WBGene00001600	glh-3	64	41.685	ENSHBUG00000001897	ddx4	74	41.685	Haplochromis_burtoni
WBGene00001600	glh-3	64	39.348	ENSHGLG00000003594	DDX4	72	36.481	Heterocephalus_glaber_female
WBGene00001600	glh-3	65	41.667	ENSHCOG00000018337	ddx4	77	41.667	Hippocampus_comes
WBGene00001600	glh-3	59	42.890	ENSIPUG00000001845	ddx4	71	42.105	Ictalurus_punctatus
WBGene00001600	glh-3	66	40.506	ENSSTOG00000021044	DDX4	65	40.506	Ictidomys_tridecemlineatus
WBGene00001600	glh-3	67	40.208	ENSJJAG00000015867	Ddx4	66	40.208	Jaculus_jaculus
WBGene00001600	glh-3	64	42.060	ENSKMAG00000012439	ddx4	70	41.970	Kryptolebias_marmoratus
WBGene00001600	glh-3	65	41.489	ENSLBEG00000019504	ddx4	71	41.489	Labrus_bergylta
WBGene00001600	glh-3	59	42.217	ENSLOCG00000010887	ddx4	90	41.425	Lepisosteus_oculatus
WBGene00001600	glh-3	65	40.977	ENSLAFG00000005900	DDX4	65	40.977	Loxodonta_africana
WBGene00001600	glh-3	78	37.411	ENSMFAG00000040186	DDX4	76	41.758	Macaca_fascicularis
WBGene00001600	glh-3	78	37.411	ENSMMUG00000017386	DDX4	76	41.758	Macaca_mulatta
WBGene00001600	glh-3	78	37.411	ENSMNEG00000033343	DDX4	76	41.758	Macaca_nemestrina
WBGene00001600	glh-3	78	35.284	ENSMLEG00000038233	DDX4	78	39.121	Mandrillus_leucophaeus
WBGene00001600	glh-3	52	43.883	ENSMAMG00000003574	ddx4	92	43.883	Mastacembelus_armatus
WBGene00001600	glh-3	64	41.685	ENSMZEG00005019116	ddx4	76	41.685	Maylandia_zebra
WBGene00001600	glh-3	64	36.226	ENSMAUG00000019873	Ddx4	65	36.226	Mesocricetus_auratus
WBGene00001600	glh-3	78	37.871	ENSMICG00000008994	-	93	37.871	Microcebus_murinus
WBGene00001600	glh-3	67	30.832	ENSMICG00000028132	-	71	31.200	Microcebus_murinus
WBGene00001600	glh-3	67	40.625	ENSMOCG00000013250	Ddx4	66	40.625	Microtus_ochrogaster
WBGene00001600	glh-3	62	43.488	ENSMMOG00000004689	ddx4	77	43.488	Mola_mola
WBGene00001600	glh-3	64	42.072	ENSMODG00000019511	DDX4	63	42.072	Monodelphis_domestica
WBGene00001600	glh-3	67	40.417	MGP_CAROLIEiJ_G0018893	Ddx4	66	40.417	Mus_caroli
WBGene00001600	glh-3	64	41.432	ENSMUSG00000021758	Ddx4	63	41.432	Mus_musculus
WBGene00001600	glh-3	67	40.625	MGP_PahariEiJ_G0015964	Ddx4	66	40.625	Mus_pahari
WBGene00001600	glh-3	67	40.625	MGP_SPRETEiJ_G0019772	Ddx4	66	40.625	Mus_spretus
WBGene00001600	glh-3	65	40.685	ENSMPUG00000007596	DDX4	62	40.685	Mustela_putorius_furo
WBGene00001600	glh-3	63	41.758	ENSMLUG00000001189	DDX4	60	41.667	Myotis_lucifugus
WBGene00001600	glh-3	64	40.870	ENSNGAG00000013259	Ddx4	62	41.203	Nannospalax_galili
WBGene00001600	glh-3	64	40.821	ENSNBRG00000014442	ddx4	90	39.305	Neolamprologus_brichardi
WBGene00001600	glh-3	78	37.943	ENSNLEG00000001662	DDX4	79	41.350	Nomascus_leucogenys
WBGene00001600	glh-3	63	42.070	ENSODEG00000016951	-	64	42.070	Octodon_degus
WBGene00001600	glh-3	64	41.087	ENSODEG00000003839	-	67	41.087	Octodon_degus
WBGene00001600	glh-3	62	41.372	ENSONIG00000012063	ddx4	91	41.048	Oreochromis_niloticus
WBGene00001600	glh-3	50	42.778	ENSOANG00000004888	-	88	42.778	Ornithorhynchus_anatinus
WBGene00001600	glh-3	65	41.542	ENSOCUG00000008597	DDX4	62	41.542	Oryctolagus_cuniculus
WBGene00001600	glh-3	71	41.373	ENSORLG00000020672	ddx4	73	43.133	Oryzias_latipes
WBGene00001600	glh-3	64	42.918	ENSORLG00020014206	ddx4	72	42.918	Oryzias_latipes_hni
WBGene00001600	glh-3	64	43.133	ENSORLG00015016600	ddx4	73	43.133	Oryzias_latipes_hsok
WBGene00001600	glh-3	63	43.833	ENSOMEG00000010651	ddx4	72	43.833	Oryzias_melastigma
WBGene00001600	glh-3	65	40.685	ENSOGAG00000007588	DDX4	62	40.685	Otolemur_garnettii
WBGene00001600	glh-3	65	41.113	ENSOARG00000007644	DDX4	62	40.928	Ovis_aries
WBGene00001600	glh-3	81	36.728	ENSPPAG00000033915	DDX4	82	36.728	Pan_paniscus
WBGene00001600	glh-3	65	41.139	ENSPPRG00000011417	DDX4	65	41.139	Panthera_pardus
WBGene00001600	glh-3	65	40.717	ENSPTIG00000007748	DDX4	77	39.241	Panthera_tigris_altaica
WBGene00001600	glh-3	81	36.728	ENSPTRG00000016884	DDX4	82	36.728	Pan_troglodytes
WBGene00001600	glh-3	66	41.139	ENSPANG00000010945	DDX4	79	41.277	Papio_anubis
WBGene00001600	glh-3	66	41.429	ENSPSIG00000017179	DDX4	99	36.063	Pelodiscus_sinensis
WBGene00001600	glh-3	51	42.547	ENSPMGG00000015642	ddx4	90	42.547	Periophthalmus_magnuspinnatus
WBGene00001600	glh-3	67	40.833	ENSPEMG00000010086	Ddx4	66	40.833	Peromyscus_maniculatus_bairdii
WBGene00001600	glh-3	64	41.860	ENSPCIG00000024758	DDX4	69	41.860	Phascolarctos_cinereus
WBGene00001600	glh-3	64	41.915	ENSPFOG00000018842	ddx4	71	41.915	Poecilia_formosa
WBGene00001600	glh-3	64	41.915	ENSPLAG00000020726	ddx4	71	41.915	Poecilia_latipinna
WBGene00001600	glh-3	64	41.915	ENSPMEG00000002976	ddx4	73	41.915	Poecilia_mexicana
WBGene00001600	glh-3	64	41.915	ENSPREG00000017840	ddx4	73	41.915	Poecilia_reticulata
WBGene00001600	glh-3	66	40.928	ENSPPYG00000015472	DDX4	63	40.928	Pongo_abelii
WBGene00001600	glh-3	57	42.476	ENSPCAG00000002675	DDX4	55	42.476	Procavia_capensis
WBGene00001600	glh-3	65	40.471	ENSPVAG00000002448	DDX4	64	40.471	Pteropus_vampyrus
WBGene00001600	glh-3	64	41.685	ENSPNYG00000022212	ddx4	76	41.685	Pundamilia_nyererei
WBGene00001600	glh-3	61	43.439	ENSPNAG00000003686	ddx4	68	43.439	Pygocentrus_nattereri
WBGene00001600	glh-3	67	40.417	ENSRNOG00000026686	Ddx4	65	40.417	Rattus_norvegicus
WBGene00001600	glh-3	78	37.234	ENSRBIG00000028795	DDX4	76	41.538	Rhinopithecus_bieti
WBGene00001600	glh-3	63	41.538	ENSRROG00000045392	DDX4	76	41.538	Rhinopithecus_roxellana
WBGene00001600	glh-3	59	39.627	YPL119C	DBP1	66	39.627	Saccharomyces_cerevisiae
WBGene00001600	glh-3	65	41.328	ENSSBOG00000035231	DDX4	65	41.328	Saimiri_boliviensis_boliviensis
WBGene00001600	glh-3	64	42.072	ENSSHAG00000009132	DDX4	64	42.072	Sarcophilus_harrisii
WBGene00001600	glh-3	65	42.373	ENSSFOG00015006531	ddx4	71	42.373	Scleropages_formosus
WBGene00001600	glh-3	63	43.392	ENSSMAG00000009800	ddx4	69	43.392	Scophthalmus_maximus
WBGene00001600	glh-3	62	42.506	ENSSDUG00000022015	ddx4	68	42.506	Seriola_dumerili
WBGene00001600	glh-3	51	45.405	ENSSLDG00000015312	ddx4	90	45.405	Seriola_lalandi_dorsalis
WBGene00001600	glh-3	55	44.529	ENSSARG00000004206	DDX4	53	44.416	Sorex_araneus
WBGene00001600	glh-3	67	42.105	ENSSPUG00000007260	DDX4	81	42.105	Sphenodon_punctatus
WBGene00001600	glh-3	53	43.928	ENSSPAG00000014307	ddx4	94	43.928	Stegastes_partitus
WBGene00001600	glh-3	66	40.717	ENSSSCG00000016913	DDX4	63	40.717	Sus_scrofa
WBGene00001600	glh-3	62	41.203	ENSTGUG00000002548	DDX4	99	41.203	Taeniopygia_guttata
WBGene00001600	glh-3	65	38.627	ENSTNIG00000014474	ddx4	80	38.627	Tetraodon_nigroviridis
WBGene00001600	glh-3	64	40.564	ENSTTRG00000009316	DDX4	61	40.564	Tursiops_truncatus
WBGene00001600	glh-3	65	40.685	ENSUAMG00000023028	DDX4	68	40.685	Ursus_americanus
WBGene00001600	glh-3	65	40.685	ENSUMAG00000009291	DDX4	68	40.685	Ursus_maritimus
WBGene00001600	glh-3	65	41.328	ENSVPAG00000009491	DDX4	63	41.328	Vicugna_pacos
WBGene00001600	glh-3	65	41.113	ENSVVUG00000021369	DDX4	81	37.308	Vulpes_vulpes
WBGene00001600	glh-3	63	41.266	ENSXETG00000030832	DDX4	70	41.164	Xenopus_tropicalis
WBGene00001600	glh-3	64	41.915	ENSXMAG00000009677	ddx4	74	41.915	Xiphophorus_maculatus