EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00001601 (Gene tree)
Gene ID: -
Gene Symbol: glh-4
Alias: -
Full Name: ATP-dependent RNA helicase glh-4
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 5255 bases
Position: chrI:3726011-3731265
Accession: O76743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T12F5	zf-CCHC	PF00098.23	2.5e-27	1	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	2	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	3	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	4	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	5	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	1	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	2	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	3	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	4	5
T12F5	zf-CCHC	PF00098.23	2.5e-27	5	5
T12F5	ResIII	PF04851.15	2.1e-05	1	1
T12F5	ResIII	PF04851.15	2.1e-05	1	1
T12F5	DEAD	PF00270.29	2.5e-41	1	1
T12F5	DEAD	PF00270.29	2.5e-41	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T12F5.3.1	-	3873	NM_058806	T12F5.3.1	1156 (aa)	NP_491207	O76743
T12F5.3.2	-	3833	NM_058806	T12F5.3.2	1156 (aa)	NP_491207	O76743

Gene Model

Click here to download WBGene00001601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001601's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001601	glh-4	50	34.360	WBGene00001599	glh-2	66	35.735