EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00001744 (Gene tree)
Gene ID: -
Gene Symbol: gars-1
Alias: grs-1
Full Name: Glycine--tRNA ligase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3899 bases
Position: chrIII:5159729-5163627
Accession: Q10039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T10F2	HGTP_anticodon	PF03129.20	7.8e-20	1	1
T10F2	HGTP_anticodon	PF03129.20	8.9e-20	1	1
T10F2	tRNA-synt_2b	PF00587.25	7.9e-10	1	1
T10F2	tRNA-synt_2b	PF00587.25	8.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T10F2.1a	-	2379	NM_065692	T10F2.1a	742 (aa)	NP_498093	Q10039
T10F2.1b	-	2288	NM_181911	T10F2.1b	678 (aa)	NP_871640	Q8I711

Gene Model

Click here to download WBGene00001744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001744	gars-1	99	57.675	ENSG00000106105	GARS	91	57.675	Homo_sapiens
WBGene00001744	gars-1	99	57.292	ENSAPOG00000019999	gars	90	57.292	Acanthochromis_polyacanthus
WBGene00001744	gars-1	99	52.819	ENSAPOG00000020089	gars	99	52.819	Acanthochromis_polyacanthus
WBGene00001744	gars-1	99	57.973	ENSAMEG00000006652	GARS	91	57.973	Ailuropoda_melanoleuca
WBGene00001744	gars-1	99	54.882	ENSACIG00000020797	gars	99	54.882	Amphilophus_citrinellus
WBGene00001744	gars-1	99	56.696	ENSACIG00000020744	gars	97	53.146	Amphilophus_citrinellus
WBGene00001744	gars-1	99	57.440	ENSAOCG00000009108	gars	90	57.440	Amphiprion_ocellaris
WBGene00001744	gars-1	75	52.174	ENSAOCG00000002479	gars	99	52.174	Amphiprion_ocellaris
WBGene00001744	gars-1	99	57.143	ENSAPEG00000018850	gars	90	57.143	Amphiprion_percula
WBGene00001744	gars-1	99	52.967	ENSAPEG00000018903	gars	98	52.967	Amphiprion_percula
WBGene00001744	gars-1	99	56.637	ENSATEG00000008784	gars	99	57.512	Anabas_testudineus
WBGene00001744	gars-1	65	62.358	ENSAPLG00000015638	-	95	62.358	Anas_platyrhynchos
WBGene00001744	gars-1	99	57.122	ENSACAG00000005601	GARS	98	57.122	Anolis_carolinensis
WBGene00001744	gars-1	99	58.271	ENSANAG00000022536	GARS	98	58.271	Aotus_nancymaae
WBGene00001744	gars-1	99	57.589	ENSACLG00000027174	gars	97	53.815	Astatotilapia_calliptera
WBGene00001744	gars-1	99	55.373	ENSACLG00000027158	gars	98	55.373	Astatotilapia_calliptera
WBGene00001744	gars-1	99	52.976	ENSAMXG00000014895	gars	94	56.706	Astyanax_mexicanus
WBGene00001744	gars-1	99	58.271	ENSBTAG00000018972	GARS	91	58.271	Bos_taurus
WBGene00001744	gars-1	99	58.271	ENSCJAG00000008595	GARS	93	57.973	Callithrix_jacchus
WBGene00001744	gars-1	99	57.675	ENSCAFG00000003086	GARS	89	55.870	Canis_familiaris
WBGene00001744	gars-1	99	57.675	ENSCAFG00020004272	GARS	97	57.675	Canis_lupus_dingo
WBGene00001744	gars-1	99	58.271	ENSCHIG00000016912	GARS	99	57.895	Capra_hircus
WBGene00001744	gars-1	99	58.271	ENSTSYG00000008538	GARS	91	58.271	Carlito_syrichta
WBGene00001744	gars-1	91	46.474	ENSCAPG00000007526	GARS	98	46.474	Cavia_aperea
WBGene00001744	gars-1	98	56.972	ENSCPOG00000007547	GARS	92	56.972	Cavia_porcellus
WBGene00001744	gars-1	99	58.271	ENSCCAG00000011512	GARS	91	58.271	Cebus_capucinus
WBGene00001744	gars-1	99	57.824	ENSCATG00000036699	GARS	91	57.824	Cercocebus_atys
WBGene00001744	gars-1	99	57.973	ENSCLAG00000007985	GARS	94	57.973	Chinchilla_lanigera
WBGene00001744	gars-1	99	57.824	ENSCSAG00000014588	GARS	91	57.824	Chlorocebus_sabaeus
WBGene00001744	gars-1	99	51.118	ENSCHOG00000003253	GARS	90	51.118	Choloepus_hoffmanni
WBGene00001744	gars-1	97	57.382	ENSCPBG00000019482	GARS	90	57.382	Chrysemys_picta_bellii
WBGene00001744	gars-1	99	53.561	ENSCING00000008937	-	99	53.561	Ciona_intestinalis
WBGene00001744	gars-1	99	58.271	ENSCANG00000027727	GARS	91	58.271	Colobus_angolensis_palliatus
WBGene00001744	gars-1	99	57.973	ENSCGRG00001020450	Gars	92	57.675	Cricetulus_griseus_chok1gshd
WBGene00001744	gars-1	97	58.143	ENSCGRG00000008342	Gars	93	58.143	Cricetulus_griseus_crigri
WBGene00001744	gars-1	99	57.589	ENSCSEG00000017671	gars	90	57.589	Cynoglossus_semilaevis
WBGene00001744	gars-1	99	49.183	ENSCSEG00000017654	gars	98	49.183	Cynoglossus_semilaevis
WBGene00001744	gars-1	99	56.573	ENSCVAG00000007149	gars	92	55.764	Cyprinodon_variegatus
WBGene00001744	gars-1	99	57.887	ENSDARG00000059070	gars	97	57.887	Danio_rerio
WBGene00001744	gars-1	99	57.824	ENSDNOG00000046478	GARS	99	57.757	Dasypus_novemcinctus
WBGene00001744	gars-1	99	57.377	ENSDORG00000002672	Gars	92	57.377	Dipodomys_ordii
WBGene00001744	gars-1	99	63.056	FBgn0027088	GlyRS	99	63.056	Drosophila_melanogaster
WBGene00001744	gars-1	92	56.160	ENSETEG00000012196	GARS	97	56.160	Echinops_telfairi
WBGene00001744	gars-1	72	56.389	ENSEBUG00000002654	gars	88	56.389	Eptatretus_burgeri
WBGene00001744	gars-1	71	60.334	ENSEBUG00000002254	gars	89	60.334	Eptatretus_burgeri
WBGene00001744	gars-1	99	58.271	ENSEASG00005000388	GARS	91	58.271	Equus_asinus_asinus
WBGene00001744	gars-1	99	58.271	ENSECAG00000019373	GARS	91	58.271	Equus_caballus
WBGene00001744	gars-1	99	56.994	ENSELUG00000003692	gars	90	56.994	Esox_lucius
WBGene00001744	gars-1	99	58.271	ENSFCAG00000011415	GARS	79	58.271	Felis_catus
WBGene00001744	gars-1	90	57.566	ENSFALG00000006550	GARS	99	57.566	Ficedula_albicollis
WBGene00001744	gars-1	97	58.143	ENSFDAG00000014466	GARS	99	58.143	Fukomys_damarensis
WBGene00001744	gars-1	99	56.869	ENSFHEG00000013189	gars	90	56.869	Fundulus_heteroclitus
WBGene00001744	gars-1	92	52.564	ENSGMOG00000008856	-	100	52.564	Gadus_morhua
WBGene00001744	gars-1	99	56.677	ENSGMOG00000010728	gars	90	56.677	Gadus_morhua
WBGene00001744	gars-1	99	58.346	ENSGALG00000005694	GARS	99	58.346	Gallus_gallus
WBGene00001744	gars-1	99	56.785	ENSGAFG00000005228	gars	90	56.785	Gambusia_affinis
WBGene00001744	gars-1	99	56.696	ENSGACG00000003410	gars	92	55.861	Gasterosteus_aculeatus
WBGene00001744	gars-1	90	57.213	ENSGAGG00000017755	GARS	98	57.213	Gopherus_agassizii
WBGene00001744	gars-1	99	57.824	ENSGGOG00000004916	GARS	91	57.824	Gorilla_gorilla
WBGene00001744	gars-1	99	54.925	ENSHBUG00000000815	gars	98	54.925	Haplochromis_burtoni
WBGene00001744	gars-1	99	57.738	ENSHBUG00000016481	gars	97	53.949	Haplochromis_burtoni
WBGene00001744	gars-1	99	58.271	ENSHGLG00000016342	GARS	91	58.271	Heterocephalus_glaber_female
WBGene00001744	gars-1	99	57.973	ENSHGLG00100006787	GARS	95	57.973	Heterocephalus_glaber_male
WBGene00001744	gars-1	99	56.973	ENSHCOG00000005261	gars	98	56.973	Hippocampus_comes
WBGene00001744	gars-1	52	42.898	ENSHCOG00000005286	gars	99	37.500	Hippocampus_comes
WBGene00001744	gars-1	99	54.613	ENSIPUG00000011443	gars	89	54.613	Ictalurus_punctatus
WBGene00001744	gars-1	99	57.670	ENSSTOG00000015493	GARS	89	57.670	Ictidomys_tridecemlineatus
WBGene00001744	gars-1	99	58.198	ENSJJAG00000022474	Gars	97	58.198	Jaculus_jaculus
WBGene00001744	gars-1	99	56.994	ENSKMAG00000010428	gars	94	55.163	Kryptolebias_marmoratus
WBGene00001744	gars-1	99	55.655	ENSLBEG00000019179	gars	99	55.904	Labrus_bergylta
WBGene00001744	gars-1	99	57.504	ENSLBEG00000019228	gars	90	57.504	Labrus_bergylta
WBGene00001744	gars-1	56	49.081	ENSLBEG00000013122	-	98	49.081	Labrus_bergylta
WBGene00001744	gars-1	75	54.118	ENSLACG00000002810	GARS	98	54.118	Latimeria_chalumnae
WBGene00001744	gars-1	99	57.887	ENSLOCG00000009688	gars	89	57.887	Lepisosteus_oculatus
WBGene00001744	gars-1	99	57.903	ENSLAFG00000002496	GARS	98	57.585	Loxodonta_africana
WBGene00001744	gars-1	99	57.824	ENSMFAG00000038863	GARS	91	57.824	Macaca_fascicularis
WBGene00001744	gars-1	99	57.824	ENSMMUG00000004719	GARS	91	57.824	Macaca_mulatta
WBGene00001744	gars-1	99	53.800	ENSMNEG00000043203	GARS	91	53.800	Macaca_nemestrina
WBGene00001744	gars-1	99	57.824	ENSMLEG00000044430	GARS	91	57.824	Mandrillus_leucophaeus
WBGene00001744	gars-1	99	56.845	ENSMAMG00000001894	gars	97	56.383	Mastacembelus_armatus
WBGene00001744	gars-1	99	55.357	ENSMZEG00005019754	gars	99	55.605	Maylandia_zebra
WBGene00001744	gars-1	99	57.738	ENSMZEG00005019740	gars	97	53.949	Maylandia_zebra
WBGene00001744	gars-1	99	58.346	ENSMGAG00000003162	GARS	91	58.346	Meleagris_gallopavo
WBGene00001744	gars-1	99	58.271	ENSMAUG00000016852	Gars	92	58.271	Mesocricetus_auratus
WBGene00001744	gars-1	99	58.271	ENSMICG00000046006	GARS	98	58.271	Microcebus_murinus
WBGene00001744	gars-1	99	58.271	ENSMOCG00000017680	Gars	92	58.271	Microtus_ochrogaster
WBGene00001744	gars-1	99	55.244	ENSMMOG00000009695	gars	98	52.917	Mola_mola
WBGene00001744	gars-1	99	56.845	ENSMALG00000006592	gars	84	56.490	Monopterus_albus
WBGene00001744	gars-1	99	58.271	MGP_CAROLIEiJ_G0028410	Gars	92	58.271	Mus_caroli
WBGene00001744	gars-1	99	58.271	ENSMUSG00000029777	Gars	92	58.271	Mus_musculus
WBGene00001744	gars-1	99	58.420	MGP_PahariEiJ_G0022160	Gars	92	58.420	Mus_pahari
WBGene00001744	gars-1	99	58.271	MGP_SPRETEiJ_G0029412	Gars	97	66.923	Mus_spretus
WBGene00001744	gars-1	99	58.271	ENSMPUG00000005116	GARS	95	56.312	Mustela_putorius_furo
WBGene00001744	gars-1	99	58.271	ENSMLUG00000002043	GARS	91	58.271	Myotis_lucifugus
WBGene00001744	gars-1	99	57.675	ENSNGAG00000021844	Gars	92	57.675	Nannospalax_galili
WBGene00001744	gars-1	56	48.691	ENSNBRG00000018643	gars	98	48.691	Neolamprologus_brichardi
WBGene00001744	gars-1	99	58.036	ENSNBRG00000018585	gars	95	54.620	Neolamprologus_brichardi
WBGene00001744	gars-1	99	57.973	ENSNLEG00000015152	GARS	91	57.973	Nomascus_leucogenys
WBGene00001744	gars-1	97	54.033	ENSMEUG00000001741	GARS	99	54.033	Notamacropus_eugenii
WBGene00001744	gars-1	87	63.158	ENSOPRG00000005342	GARS	79	63.158	Ochotona_princeps
WBGene00001744	gars-1	99	57.840	ENSODEG00000008246	GARS	85	57.840	Octodon_degus
WBGene00001744	gars-1	97	57.251	ENSOANG00000006262	GARS	90	57.402	Ornithorhynchus_anatinus
WBGene00001744	gars-1	99	57.755	ENSOCUG00000005295	GARS	99	57.755	Oryctolagus_cuniculus
WBGene00001744	gars-1	99	55.965	ENSORLG00000009470	gars	98	53.441	Oryzias_latipes
WBGene00001744	gars-1	94	57.812	ENSORLG00020013036	gars	97	54.779	Oryzias_latipes_hni
WBGene00001744	gars-1	99	56.845	ENSORLG00015012886	gars	98	54.161	Oryzias_latipes_hsok
WBGene00001744	gars-1	57	47.927	ENSOMEG00000000133	gars	98	47.927	Oryzias_melastigma
WBGene00001744	gars-1	99	58.420	ENSOGAG00000013321	GARS	95	56.553	Otolemur_garnettii
WBGene00001744	gars-1	99	58.271	ENSOARG00000008017	GARS	91	58.271	Ovis_aries
WBGene00001744	gars-1	99	57.675	ENSPPAG00000037266	GARS	91	57.675	Pan_paniscus
WBGene00001744	gars-1	99	58.271	ENSPPRG00000001917	GARS	91	58.271	Panthera_pardus
WBGene00001744	gars-1	99	57.903	ENSPTIG00000016096	GARS	99	57.903	Panthera_tigris_altaica
WBGene00001744	gars-1	99	57.675	ENSPTRG00000019042	GARS	91	57.675	Pan_troglodytes
WBGene00001744	gars-1	99	57.824	ENSPANG00000026231	GARS	91	57.824	Papio_anubis
WBGene00001744	gars-1	99	57.292	ENSPKIG00000014863	gars	87	57.292	Paramormyrops_kingsleyae
WBGene00001744	gars-1	97	56.925	ENSPSIG00000010935	GARS	98	56.925	Pelodiscus_sinensis
WBGene00001744	gars-1	57	49.487	ENSPMGG00000023648	gars	99	49.487	Periophthalmus_magnuspinnatus
WBGene00001744	gars-1	99	55.344	ENSPMGG00000023644	gars	90	55.344	Periophthalmus_magnuspinnatus
WBGene00001744	gars-1	97	58.143	ENSPEMG00000019930	Gars	99	58.143	Peromyscus_maniculatus_bairdii
WBGene00001744	gars-1	99	56.953	ENSPMAG00000006586	gars	97	56.953	Petromyzon_marinus
WBGene00001744	gars-1	99	56.130	ENSPCIG00000017010	GARS	98	51.321	Phascolarctos_cinereus
WBGene00001744	gars-1	99	56.490	ENSPFOG00000004593	gars	90	56.490	Poecilia_formosa
WBGene00001744	gars-1	99	56.490	ENSPLAG00000008038	gars	90	56.490	Poecilia_latipinna
WBGene00001744	gars-1	99	56.490	ENSPMEG00000005901	gars	90	56.490	Poecilia_mexicana
WBGene00001744	gars-1	99	56.342	ENSPREG00000020960	gars	88	56.342	Poecilia_reticulata
WBGene00001744	gars-1	99	57.377	ENSPPYG00000017673	GARS	91	57.228	Pongo_abelii
WBGene00001744	gars-1	99	56.632	ENSPCAG00000007199	GARS	90	56.632	Procavia_capensis
WBGene00001744	gars-1	99	56.483	ENSPCOG00000008887	GARS	95	54.701	Propithecus_coquereli
WBGene00001744	gars-1	99	58.271	ENSPVAG00000013565	GARS	95	56.553	Pteropus_vampyrus
WBGene00001744	gars-1	99	55.522	ENSPNYG00000004960	gars	98	55.522	Pundamilia_nyererei
WBGene00001744	gars-1	99	57.738	ENSPNYG00000005017	gars	95	54.348	Pundamilia_nyererei
WBGene00001744	gars-1	99	56.845	ENSPNAG00000020164	gars	90	56.845	Pygocentrus_nattereri
WBGene00001744	gars-1	99	58.122	ENSRNOG00000011052	Gars	96	56.429	Rattus_norvegicus
WBGene00001744	gars-1	99	56.483	ENSRBIG00000040287	GARS	91	56.483	Rhinopithecus_bieti
WBGene00001744	gars-1	99	57.973	ENSRROG00000044600	GARS	91	57.973	Rhinopithecus_roxellana
WBGene00001744	gars-1	92	46.657	YBR121C	GRS1	98	46.657	Saccharomyces_cerevisiae
WBGene00001744	gars-1	88	47.746	YPR081C	-	97	47.746	Saccharomyces_cerevisiae
WBGene00001744	gars-1	99	58.122	ENSSBOG00000022287	GARS	91	58.122	Saimiri_boliviensis_boliviensis
WBGene00001744	gars-1	99	53.235	ENSSHAG00000003419	GARS	98	53.235	Sarcophilus_harrisii
WBGene00001744	gars-1	99	56.696	ENSSFOG00015000573	gars	98	53.217	Scleropages_formosus
WBGene00001744	gars-1	99	56.994	ENSSMAG00000013672	gars	89	56.994	Scophthalmus_maximus
WBGene00001744	gars-1	99	55.506	ENSSMAG00000013709	gars	99	55.506	Scophthalmus_maximus
WBGene00001744	gars-1	99	56.845	ENSSDUG00000016795	gars	90	56.845	Seriola_dumerili
WBGene00001744	gars-1	99	47.781	ENSSDUG00000016758	gars	99	47.781	Seriola_dumerili
WBGene00001744	gars-1	99	56.994	ENSSLDG00000014279	gars	90	56.994	Seriola_lalandi_dorsalis
WBGene00001744	gars-1	99	55.804	ENSSLDG00000014238	gars	99	55.804	Seriola_lalandi_dorsalis
WBGene00001744	gars-1	76	57.993	ENSSARG00000008410	GARS	82	57.993	Sorex_araneus
WBGene00001744	gars-1	99	57.143	ENSSPUG00000001815	-	90	57.143	Sphenodon_punctatus
WBGene00001744	gars-1	52	48.295	ENSSPAG00000011882	gars	98	48.295	Stegastes_partitus
WBGene00001744	gars-1	99	55.060	ENSSPAG00000012003	gars	89	55.060	Stegastes_partitus
WBGene00001744	gars-1	99	58.569	ENSSSCG00000016677	GARS	96	56.320	Sus_scrofa
WBGene00001744	gars-1	97	56.344	ENSTGUG00000000364	GARS	99	56.344	Taeniopygia_guttata
WBGene00001744	gars-1	99	57.887	ENSTRUG00000017557	gars	98	55.102	Takifugu_rubripes
WBGene00001744	gars-1	99	57.504	ENSTNIG00000012738	gars	95	57.504	Tetraodon_nigroviridis
WBGene00001744	gars-1	92	54.327	ENSTBEG00000008972	GARS	84	54.327	Tupaia_belangeri
WBGene00001744	gars-1	97	57.534	ENSTTRG00000000334	GARS	99	57.534	Tursiops_truncatus
WBGene00001744	gars-1	99	58.122	ENSUAMG00000016756	GARS	95	56.286	Ursus_americanus
WBGene00001744	gars-1	97	57.839	ENSUMAG00000002158	GARS	99	57.895	Ursus_maritimus
WBGene00001744	gars-1	99	53.949	ENSVPAG00000009438	GARS	97	52.057	Vicugna_pacos
WBGene00001744	gars-1	99	57.675	ENSVVUG00000020981	GARS	86	57.675	Vulpes_vulpes
WBGene00001744	gars-1	99	55.750	ENSXETG00000018474	gars	94	54.103	Xenopus_tropicalis
WBGene00001744	gars-1	99	55.865	ENSXCOG00000010005	gars	90	55.865	Xiphophorus_couchianus
WBGene00001744	gars-1	99	56.637	ENSXMAG00000009402	gars	89	56.471	Xiphophorus_maculatus