EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00001808 (Gene tree)
Gene ID: -
Gene Symbol: gut-2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1130 bases
Position: chrV:13497690-13498819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T10G3	LSM	PF01423.22	3.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T10G3.6b	-	388	-	T10G3.6b	60 (aa)	NP_001256512	E1B6V1
T10G3.6a	-	476	-	T10G3.6a	97 (aa)	NP_001256511	P92022

Gene Model

Click here to download WBGene00001808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001808	gut-2	80	31.250	WBGene00003078	lsm-4	63	31.250
WBGene00001808	gut-2	92	32.222	WBGene00004916	snr-3	75	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001808	gut-2	97	84.043	ENSG00000204392	LSM2	99	84.043	Homo_sapiens
WBGene00001808	gut-2	97	82.979	ENSAPOG00000017967	si:ch73-14h10.2	99	82.979	Acanthochromis_polyacanthus
WBGene00001808	gut-2	96	83.871	ENSAMEG00000006483	LSM2	99	83.871	Ailuropoda_melanoleuca
WBGene00001808	gut-2	96	82.796	ENSACIG00000007795	si:ch73-14h10.2	62	82.796	Amphilophus_citrinellus
WBGene00001808	gut-2	96	82.796	ENSAOCG00000006949	si:ch73-14h10.2	77	82.796	Amphiprion_ocellaris
WBGene00001808	gut-2	96	82.796	ENSAPEG00000020375	si:ch73-14h10.2	86	82.796	Amphiprion_percula
WBGene00001808	gut-2	97	82.979	ENSATEG00000011376	si:ch73-14h10.2	99	82.979	Anabas_testudineus
WBGene00001808	gut-2	96	83.871	ENSACAG00000017281	LSM2	89	83.871	Anolis_carolinensis
WBGene00001808	gut-2	93	66.667	ENSANAG00000028033	-	95	66.667	Aotus_nancymaae
WBGene00001808	gut-2	97	84.043	ENSANAG00000028372	LSM2	99	84.043	Aotus_nancymaae
WBGene00001808	gut-2	97	82.979	ENSACLG00000024717	smx5	99	82.979	Astatotilapia_calliptera
WBGene00001808	gut-2	97	82.979	ENSAMXG00000036868	si:ch73-14h10.2	99	82.979	Astyanax_mexicanus
WBGene00001808	gut-2	97	84.043	ENSBTAG00000005634	LSM2	99	84.043	Bos_taurus
WBGene00001808	gut-2	97	84.043	ENSCJAG00000040899	LSM2	99	84.043	Callithrix_jacchus
WBGene00001808	gut-2	72	78.571	ENSCAFG00020016978	-	86	78.571	Canis_lupus_dingo
WBGene00001808	gut-2	96	83.871	ENSCHIG00000016153	LSM2	99	83.871	Capra_hircus
WBGene00001808	gut-2	97	84.043	ENSTSYG00000034844	LSM2	99	84.043	Carlito_syrichta
WBGene00001808	gut-2	92	82.022	ENSTSYG00000030015	-	95	82.022	Carlito_syrichta
WBGene00001808	gut-2	73	80.282	ENSCAPG00000009970	LSM2	91	80.282	Cavia_aperea
WBGene00001808	gut-2	97	84.043	ENSCPOG00000021053	LSM2	99	84.043	Cavia_porcellus
WBGene00001808	gut-2	97	84.043	ENSCCAG00000024276	LSM2	99	84.043	Cebus_capucinus
WBGene00001808	gut-2	97	84.043	ENSCATG00000013737	LSM2	99	84.043	Cercocebus_atys
WBGene00001808	gut-2	97	84.043	ENSCLAG00000008081	LSM2	99	84.043	Chinchilla_lanigera
WBGene00001808	gut-2	97	84.043	ENSCSAG00000008800	LSM2	99	84.043	Chlorocebus_sabaeus
WBGene00001808	gut-2	97	84.043	ENSCHOG00000007702	LSM2	99	84.043	Choloepus_hoffmanni
WBGene00001808	gut-2	97	81.915	ENSCING00000022677	-	99	81.915	Ciona_intestinalis
WBGene00001808	gut-2	97	84.043	ENSCANG00000039576	LSM2	99	84.043	Colobus_angolensis_palliatus
WBGene00001808	gut-2	97	84.043	ENSCGRG00001013932	Lsm2	99	84.043	Cricetulus_griseus_chok1gshd
WBGene00001808	gut-2	73	80.282	ENSCGRG00000013311	Lsm2	61	80.282	Cricetulus_griseus_crigri
WBGene00001808	gut-2	97	82.979	ENSCSEG00000002911	si:ch73-14h10.2	99	82.979	Cynoglossus_semilaevis
WBGene00001808	gut-2	96	82.796	ENSCVAG00000015394	si:ch73-14h10.2	88	82.796	Cyprinodon_variegatus
WBGene00001808	gut-2	97	82.979	ENSDARG00000070867	smx5	99	82.979	Danio_rerio
WBGene00001808	gut-2	96	83.871	ENSDNOG00000002633	LSM2	99	83.871	Dasypus_novemcinctus
WBGene00001808	gut-2	97	84.043	ENSDORG00000026571	Lsm2	99	84.043	Dipodomys_ordii
WBGene00001808	gut-2	92	84.270	FBgn0036277	CG10418	94	84.270	Drosophila_melanogaster
WBGene00001808	gut-2	96	83.871	ENSEASG00005015670	LSM2	78	83.871	Equus_asinus_asinus
WBGene00001808	gut-2	96	83.871	ENSECAG00000018791	LSM2	78	83.871	Equus_caballus
WBGene00001808	gut-2	97	84.043	ENSELUG00000008241	smx5	99	84.043	Esox_lucius
WBGene00001808	gut-2	97	84.043	ENSFCAG00000045887	LSM2	99	84.043	Felis_catus
WBGene00001808	gut-2	97	84.043	ENSFDAG00000000390	LSM2	99	84.043	Fukomys_damarensis
WBGene00001808	gut-2	96	80.000	ENSFHEG00000009619	si:ch73-14h10.2	99	80.000	Fundulus_heteroclitus
WBGene00001808	gut-2	96	82.796	ENSGMOG00000019208	si:ch73-14h10.2	99	82.796	Gadus_morhua
WBGene00001808	gut-2	97	82.979	ENSGAFG00000017286	si:ch73-14h10.2	99	82.979	Gambusia_affinis
WBGene00001808	gut-2	97	82.979	ENSGACG00000003827	si:ch73-14h10.2	99	82.979	Gasterosteus_aculeatus
WBGene00001808	gut-2	97	84.043	ENSGAGG00000012458	LSM2	99	84.043	Gopherus_agassizii
WBGene00001808	gut-2	97	84.043	ENSGGOG00000011383	LSM2	99	84.043	Gorilla_gorilla
WBGene00001808	gut-2	97	84.043	ENSHGLG00000011299	LSM2	99	84.043	Heterocephalus_glaber_female
WBGene00001808	gut-2	97	84.043	ENSHGLG00100017194	LSM2	99	84.043	Heterocephalus_glaber_male
WBGene00001808	gut-2	97	82.979	ENSHCOG00000014057	si:ch73-14h10.2	99	82.979	Hippocampus_comes
WBGene00001808	gut-2	97	82.979	ENSIPUG00000010539	lsm2	99	82.979	Ictalurus_punctatus
WBGene00001808	gut-2	97	84.043	ENSSTOG00000013144	LSM2	99	84.043	Ictidomys_tridecemlineatus
WBGene00001808	gut-2	91	67.045	ENSJJAG00000019477	-	99	67.045	Jaculus_jaculus
WBGene00001808	gut-2	97	82.979	ENSKMAG00000014909	si:ch73-14h10.2	99	82.979	Kryptolebias_marmoratus
WBGene00001808	gut-2	96	81.720	ENSLBEG00000025781	si:ch73-14h10.2	97	81.720	Labrus_bergylta
WBGene00001808	gut-2	97	82.979	ENSLACG00000015064	LSM2	99	82.979	Latimeria_chalumnae
WBGene00001808	gut-2	97	82.979	ENSLOCG00000005228	si:ch73-14h10.2	99	82.979	Lepisosteus_oculatus
WBGene00001808	gut-2	96	83.871	ENSLAFG00000016139	LSM2	99	83.871	Loxodonta_africana
WBGene00001808	gut-2	97	84.043	ENSMFAG00000001016	LSM2	99	84.043	Macaca_fascicularis
WBGene00001808	gut-2	96	67.742	ENSMMUG00000045473	-	96	67.742	Macaca_mulatta
WBGene00001808	gut-2	97	84.043	ENSMMUG00000006832	LSM2	99	84.043	Macaca_mulatta
WBGene00001808	gut-2	97	84.043	ENSMNEG00000045355	LSM2	99	84.043	Macaca_nemestrina
WBGene00001808	gut-2	76	68.919	ENSMNEG00000040973	-	90	68.919	Macaca_nemestrina
WBGene00001808	gut-2	97	84.043	ENSMLEG00000037369	-	99	84.043	Mandrillus_leucophaeus
WBGene00001808	gut-2	96	66.667	ENSMLEG00000031181	-	96	66.667	Mandrillus_leucophaeus
WBGene00001808	gut-2	97	82.979	ENSMAMG00000010053	si:ch73-14h10.2	72	82.979	Mastacembelus_armatus
WBGene00001808	gut-2	96	81.053	ENSMZEG00005008688	si:ch73-14h10.2	99	81.053	Maylandia_zebra
WBGene00001808	gut-2	97	84.043	ENSMAUG00000021966	Lsm2	99	84.043	Mesocricetus_auratus
WBGene00001808	gut-2	73	64.789	ENSMICG00000046764	-	90	64.789	Microcebus_murinus
WBGene00001808	gut-2	97	84.043	ENSMOCG00000015306	Lsm2	99	84.043	Microtus_ochrogaster
WBGene00001808	gut-2	96	81.720	ENSMMOG00000005603	si:ch73-14h10.2	99	81.720	Mola_mola
WBGene00001808	gut-2	96	82.796	ENSMODG00000015177	LSM2	98	82.796	Monodelphis_domestica
WBGene00001808	gut-2	97	82.979	ENSMALG00000016490	si:ch73-14h10.2	99	82.979	Monopterus_albus
WBGene00001808	gut-2	97	84.043	MGP_CAROLIEiJ_G0021490	Lsm2	99	84.043	Mus_caroli
WBGene00001808	gut-2	97	84.043	ENSMUSG00000007050	Lsm2	99	84.043	Mus_musculus
WBGene00001808	gut-2	97	84.043	MGP_PahariEiJ_G0020485	Lsm2	99	84.043	Mus_pahari
WBGene00001808	gut-2	97	84.043	MGP_SPRETEiJ_G0022395	Lsm2	99	84.043	Mus_spretus
WBGene00001808	gut-2	97	84.043	ENSNGAG00000003997	Lsm2	99	84.043	Nannospalax_galili
WBGene00001808	gut-2	96	81.053	ENSNBRG00000012904	si:ch73-14h10.2	99	81.053	Neolamprologus_brichardi
WBGene00001808	gut-2	97	84.043	ENSNLEG00000035542	LSM2	99	84.043	Nomascus_leucogenys
WBGene00001808	gut-2	72	78.571	ENSMEUG00000003419	LSM2	99	78.571	Notamacropus_eugenii
WBGene00001808	gut-2	97	84.043	ENSOPRG00000003668	LSM2	99	84.043	Ochotona_princeps
WBGene00001808	gut-2	97	84.043	ENSODEG00000017583	LSM2	99	84.043	Octodon_degus
WBGene00001808	gut-2	97	82.979	ENSONIG00000019321	si:ch73-14h10.2	99	82.979	Oreochromis_niloticus
WBGene00001808	gut-2	96	83.871	ENSOANG00000005398	LSM2	99	83.871	Ornithorhynchus_anatinus
WBGene00001808	gut-2	97	84.043	ENSOCUG00000002583	LSM2	99	84.043	Oryctolagus_cuniculus
WBGene00001808	gut-2	97	82.979	ENSORLG00000029858	si:ch73-14h10.2	99	82.979	Oryzias_latipes
WBGene00001808	gut-2	97	63.415	ENSORLG00015000465	si:ch73-14h10.2	99	63.415	Oryzias_latipes_hsok
WBGene00001808	gut-2	97	82.979	ENSOMEG00000002892	si:ch73-14h10.2	99	82.979	Oryzias_melastigma
WBGene00001808	gut-2	96	83.871	ENSOARG00000004575	LSM2	99	83.871	Ovis_aries
WBGene00001808	gut-2	97	84.043	ENSPPAG00000032431	LSM2	99	84.043	Pan_paniscus
WBGene00001808	gut-2	76	71.622	ENSPPAG00000043941	-	91	71.622	Pan_paniscus
WBGene00001808	gut-2	97	84.043	ENSPPRG00000015353	LSM2	99	84.043	Panthera_pardus
WBGene00001808	gut-2	96	83.871	ENSPTIG00000010303	LSM2	98	83.871	Panthera_tigris_altaica
WBGene00001808	gut-2	97	84.043	ENSPTRG00000017986	LSM2	99	84.043	Pan_troglodytes
WBGene00001808	gut-2	97	84.043	ENSPANG00000024577	LSM2	99	84.043	Papio_anubis
WBGene00001808	gut-2	97	82.979	ENSPKIG00000007028	si:ch73-14h10.2	99	82.979	Paramormyrops_kingsleyae
WBGene00001808	gut-2	96	83.871	ENSPSIG00000004458	LSM2	78	83.871	Pelodiscus_sinensis
WBGene00001808	gut-2	96	81.720	ENSPMGG00000018511	si:ch73-14h10.2	99	81.720	Periophthalmus_magnuspinnatus
WBGene00001808	gut-2	96	82.796	ENSPCIG00000018560	-	94	82.796	Phascolarctos_cinereus
WBGene00001808	gut-2	97	82.979	ENSPFOG00000001621	si:ch73-14h10.2	99	82.979	Poecilia_formosa
WBGene00001808	gut-2	97	82.979	ENSPLAG00000017165	si:ch73-14h10.2	99	82.979	Poecilia_latipinna
WBGene00001808	gut-2	97	82.979	ENSPMEG00000019574	si:ch73-14h10.2	99	82.979	Poecilia_mexicana
WBGene00001808	gut-2	96	81.720	ENSPREG00000016534	si:ch73-14h10.2	99	81.720	Poecilia_reticulata
WBGene00001808	gut-2	97	84.043	ENSPPYG00000016461	-	53	84.043	Pongo_abelii
WBGene00001808	gut-2	97	84.043	ENSPCAG00000013737	LSM2	99	84.043	Procavia_capensis
WBGene00001808	gut-2	97	84.043	ENSPCOG00000020134	LSM2	99	84.043	Propithecus_coquereli
WBGene00001808	gut-2	97	84.043	ENSPVAG00000012405	LSM2	99	84.043	Pteropus_vampyrus
WBGene00001808	gut-2	97	82.979	ENSPNYG00000019298	smx5	99	82.979	Pundamilia_nyererei
WBGene00001808	gut-2	97	82.979	ENSPNAG00000027769	si:ch73-14h10.2	99	82.979	Pygocentrus_nattereri
WBGene00001808	gut-2	97	84.043	ENSRNOG00000048725	Lsm2	99	84.043	Rattus_norvegicus
WBGene00001808	gut-2	55	81.132	ENSRNOG00000011065	AC126899.1	76	81.132	Rattus_norvegicus
WBGene00001808	gut-2	76	71.622	ENSRBIG00000011356	-	90	71.622	Rhinopithecus_bieti
WBGene00001808	gut-2	97	84.043	ENSRBIG00000010172	LSM2	99	84.043	Rhinopithecus_bieti
WBGene00001808	gut-2	76	71.622	ENSRROG00000030708	-	90	71.622	Rhinopithecus_roxellana
WBGene00001808	gut-2	97	84.043	ENSRROG00000030345	LSM2	99	84.043	Rhinopithecus_roxellana
WBGene00001808	gut-2	97	58.511	YBL026W	LSM2	99	58.511	Saccharomyces_cerevisiae
WBGene00001808	gut-2	97	84.043	ENSSBOG00000018943	LSM2	99	84.043	Saimiri_boliviensis_boliviensis
WBGene00001808	gut-2	97	82.979	ENSSFOG00015006734	lsm2	99	82.979	Scleropages_formosus
WBGene00001808	gut-2	97	82.979	ENSSMAG00000001122	si:ch73-14h10.2	99	82.979	Scophthalmus_maximus
WBGene00001808	gut-2	97	82.979	ENSSDUG00000021605	smx5	99	82.979	Seriola_dumerili
WBGene00001808	gut-2	97	82.979	ENSSLDG00000002765	si:ch73-14h10.2	99	82.979	Seriola_lalandi_dorsalis
WBGene00001808	gut-2	97	82.979	ENSSPUG00000009631	LSM2	99	82.979	Sphenodon_punctatus
WBGene00001808	gut-2	97	82.979	ENSSPAG00000016904	si:ch73-14h10.2	99	82.979	Stegastes_partitus
WBGene00001808	gut-2	97	84.043	ENSSSCG00000039021	LSM2	99	84.043	Sus_scrofa
WBGene00001808	gut-2	96	81.720	ENSTRUG00000002093	si:ch73-14h10.2	99	81.720	Takifugu_rubripes
WBGene00001808	gut-2	68	84.848	ENSTNIG00000013770	si:ch73-14h10.2	99	84.848	Tetraodon_nigroviridis
WBGene00001808	gut-2	97	84.043	ENSTTRG00000014131	LSM2	99	84.043	Tursiops_truncatus
WBGene00001808	gut-2	96	83.871	ENSUMAG00000013425	LSM2	65	83.871	Ursus_maritimus
WBGene00001808	gut-2	96	83.871	ENSVPAG00000001761	LSM2	99	83.871	Vicugna_pacos
WBGene00001808	gut-2	76	79.730	ENSVVUG00000016264	-	91	79.730	Vulpes_vulpes
WBGene00001808	gut-2	97	82.979	ENSXETG00000024077	lsm2	99	82.979	Xenopus_tropicalis
WBGene00001808	gut-2	96	81.720	ENSXCOG00000006078	si:ch73-14h10.2	99	81.720	Xiphophorus_couchianus
WBGene00001808	gut-2	96	81.720	ENSXMAG00000028018	si:ch73-14h10.2	99	81.720	Xiphophorus_maculatus