EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
WBGene00001840 (Gene tree)
Gene ID
-
Gene Symbol
hel-1
Alias
-
Full Name
Spliceosome RNA helicase DDX39B homolog
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
2019 bases
Position
chrII:8326852-8328870
Accession
Q18212
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
C26D10ResIIIPF04851.151.2e-0511
C26D10DEADPF00270.298e-3911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
C26D10.2b-1594NR_133630-- (aa)--
C26D10.2a-1522NM_001026814C26D10.2a425 (aa)NP_001021985Q18212
Gene Model
Click here to download WBGene00001840's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00001840's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
WBGene00001840hel-18232.075WBGene00002244laf-15732.075
WBGene00001840hel-18635.326WBGene00022029Y65B4A.69633.948
WBGene00001840hel-18232.065WBGene00006888vbh-15732.065
WBGene00001840hel-18935.185WBGene00000479cgh-18735.185
WBGene00001840hel-18530.645WBGene00022148ddx-275030.645
WBGene00001840hel-19031.675WBGene00018997F57B9.39331.675
WBGene00001840hel-19037.500WBGene00002083inf-19437.500
WBGene00001840hel-17933.721WBGene00010260ddx-176133.721
WBGene00001840hel-18430.357WBGene00017162ddx-235230.357
WBGene00001840hel-18635.054WBGene00018007F33D11.109135.054
WBGene00001840hel-17734.639WBGene00012059T26G10.16734.639
WBGene00001840hel-18230.194WBGene00019219H20J04.47330.194
WBGene00001840hel-18532.124WBGene00018776F53H1.15132.216
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00001840hel-19976.134ENSG00000123136DDX39A9876.850Homo_sapiens
WBGene00001840hel-19977.327ENSAPOG00000013540ddx39aa9877.327Acanthochromis_polyacanthus
WBGene00001840hel-19272.335ENSAPOG00000009309-9870.238Acanthochromis_polyacanthus
WBGene00001840hel-19478.856ENSAMEG00000013379DDX39A9677.327Ailuropoda_melanoleuca
WBGene00001840hel-19478.856ENSACIG00000020898DDX39A9877.088Amphilophus_citrinellus
WBGene00001840hel-19977.381ENSACIG00000007948-9877.381Amphilophus_citrinellus
WBGene00001840hel-19478.607ENSAOCG00000007403-9876.850Amphiprion_ocellaris
WBGene00001840hel-19478.856ENSAOCG00000011728DDX39A9877.143Amphiprion_ocellaris
WBGene00001840hel-19478.607ENSAPEG00000017193-9876.850Amphiprion_percula
WBGene00001840hel-19478.856ENSAPEG00000001421DDX39A9877.143Amphiprion_percula
WBGene00001840hel-19279.898ENSATEG00000012052DDX39A9477.088Anabas_testudineus
WBGene00001840hel-19977.143ENSATEG00000004275ddx39aa9877.143Anabas_testudineus
WBGene00001840hel-19279.135ENSACAG00000010756DDX39A9876.485Anolis_carolinensis
WBGene00001840hel-19278.372ENSANAG00000036829-9876.134Aotus_nancymaae
WBGene00001840hel-19856.802ENSANAG00000025403-9756.802Aotus_nancymaae
WBGene00001840hel-19478.856ENSACLG00000004945-9877.143Astatotilapia_calliptera
WBGene00001840hel-19477.861ENSACLG00000001214DDX39A9876.134Astatotilapia_calliptera
WBGene00001840hel-19478.856ENSAMXG00000018631DDX39A9876.850Astyanax_mexicanus
WBGene00001840hel-19378.173ENSAMXG00000015256-9875.952Astyanax_mexicanus
WBGene00001840hel-19279.389ENSBTAG00000021820DDX39A9876.905Bos_taurus
WBGene00001840hel-19275.318ENSCJAG00000004760DDX39A9873.270Callithrix_jacchus
WBGene00001840hel-19478.856ENSCAFG00000016355DDX39A9877.381Canis_familiaris
WBGene00001840hel-19478.856ENSCAFG00020007399DDX39A9877.381Canis_lupus_dingo
WBGene00001840hel-19279.389ENSCHIG00000019059DDX39A9876.905Capra_hircus
WBGene00001840hel-19279.644ENSTSYG00000030248DDX39A9877.088Carlito_syrichta
WBGene00001840hel-19280.153ENSCAPG00000010901DDX39A9877.566Cavia_aperea
WBGene00001840hel-19280.153ENSCPOG00000008615DDX39A9877.566Cavia_porcellus
WBGene00001840hel-19279.389ENSCCAG00000034932DDX39A9877.088Cebus_capucinus
WBGene00001840hel-19976.134ENSCATG00000044440DDX39A9876.850Cercocebus_atys
WBGene00001840hel-19280.153ENSCLAG00000015069DDX39A9877.566Chinchilla_lanigera
WBGene00001840hel-19976.134ENSCSAG00000006342DDX39A9876.850Chlorocebus_sabaeus
WBGene00001840hel-19276.142ENSCPBG00000011879DDX39A9873.697Chrysemys_picta_bellii
WBGene00001840hel-19280.563ENSCING00000005175-9977.541Ciona_intestinalis
WBGene00001840hel-19380.653ENSCSAVG00000002162-9978.014Ciona_savignyi
WBGene00001840hel-19973.747ENSCANG00000034172-9874.463Colobus_angolensis_palliatus
WBGene00001840hel-19976.134ENSCANG00000037031-9876.850Colobus_angolensis_palliatus
WBGene00001840hel-19976.850ENSCGRG00001001611Ddx399876.850Cricetulus_griseus_chok1gshd
WBGene00001840hel-19976.850ENSCGRG00000014915Ddx399876.850Cricetulus_griseus_crigri
WBGene00001840hel-19976.190ENSCSEG00000003434ddx39aa9976.190Cynoglossus_semilaevis
WBGene00001840hel-19478.607ENSCSEG00000015474DDX39A9776.850Cynoglossus_semilaevis
WBGene00001840hel-19478.358ENSCVAG00000007477DDX39A9876.722Cyprinodon_variegatus
WBGene00001840hel-19478.856ENSDARG00000015111ddx39ab9877.381Danio_rerio
WBGene00001840hel-19577.778ENSDARG00000006225ddx39aa9876.540Danio_rerio
WBGene00001840hel-18666.038ENSDNOG00000049340DDX39A8964.322Dasypus_novemcinctus
WBGene00001840hel-19478.358ENSDORG00000013041Ddx399876.905Dipodomys_ordii
WBGene00001840hel-19977.778FBgn0014189Hel25E9977.778Drosophila_melanogaster
WBGene00001840hel-19266.752ENSETEG00000016559DDX39A9865.072Echinops_telfairi
WBGene00001840hel-19578.378ENSEBUG00000010042ddx39aa9677.251Eptatretus_burgeri
WBGene00001840hel-19478.607ENSEASG00005015272DDX39A9877.143Equus_asinus_asinus
WBGene00001840hel-19478.607ENSECAG00000040285DDX39A9877.143Equus_caballus
WBGene00001840hel-19874.580ENSEEUG00000015035DDX39A9974.580Erinaceus_europaeus
WBGene00001840hel-19976.850ENSELUG00000006779-9076.739Esox_lucius
WBGene00001840hel-19976.134ENSELUG00000010581DDX39A9876.134Esox_lucius
WBGene00001840hel-19478.856ENSFCAG00000013488DDX39A9877.381Felis_catus
WBGene00001840hel-19280.153ENSFDAG00000014649DDX39A9877.619Fukomys_damarensis
WBGene00001840hel-19478.109ENSFHEG00000009716-9876.372Fundulus_heteroclitus
WBGene00001840hel-19478.358ENSFHEG00000002643ddx39aa9876.905Fundulus_heteroclitus
WBGene00001840hel-19478.750ENSGMOG00000014316DDX39A9877.218Gadus_morhua
WBGene00001840hel-19279.135ENSGMOG00000011287-9676.499Gadus_morhua
WBGene00001840hel-19970.644ENSGAFG00000014768-9870.644Gambusia_affinis
WBGene00001840hel-19976.429ENSGAFG00000010170ddx39aa9876.429Gambusia_affinis
WBGene00001840hel-19478.109ENSGACG00000019335ddx39aa9876.429Gasterosteus_aculeatus
WBGene00001840hel-19479.104ENSGACG00000006096DDX39A9877.327Gasterosteus_aculeatus
WBGene00001840hel-19279.898ENSGAGG00000007527DDX39A9877.197Gopherus_agassizii
WBGene00001840hel-19976.134ENSGGOG00000005414DDX39A9876.850Gorilla_gorilla
WBGene00001840hel-19477.861ENSHBUG00000020257DDX39A9876.134Haplochromis_burtoni
WBGene00001840hel-19478.856ENSHBUG00000003748ddx39aa9877.143Haplochromis_burtoni
WBGene00001840hel-19279.644ENSHGLG00000018263DDX39A9877.143Heterocephalus_glaber_female
WBGene00001840hel-18679.726ENSHGLG00100007165DDX39A9272.967Heterocephalus_glaber_male
WBGene00001840hel-19975.118ENSHCOG00000018674ddx39aa9875.895Hippocampus_comes
WBGene00001840hel-19975.476ENSHCOG00000009111-9875.476Hippocampus_comes
WBGene00001840hel-19477.114ENSIPUG00000021552ddx39aa9875.418Ictalurus_punctatus
WBGene00001840hel-19279.644ENSIPUG00000021341DDX39A9877.088Ictalurus_punctatus
WBGene00001840hel-19478.856ENSSTOG00000013762DDX39A9877.381Ictidomys_tridecemlineatus
WBGene00001840hel-19977.804ENSJJAG00000004337-9877.804Jaculus_jaculus
WBGene00001840hel-19867.225ENSJJAG00000017826-9567.225Jaculus_jaculus
WBGene00001840hel-19279.898ENSKMAG00000011231DDX39A9577.088Kryptolebias_marmoratus
WBGene00001840hel-19478.856ENSKMAG00000000831-9877.143Kryptolebias_marmoratus
WBGene00001840hel-19478.109ENSLBEG00000002817DDX39A9376.372Labrus_bergylta
WBGene00001840hel-19477.612ENSLBEG00000025618-9776.316Labrus_bergylta
WBGene00001840hel-19977.327ENSLACG00000015063DDX39A9877.327Latimeria_chalumnae
WBGene00001840hel-19478.358ENSLOCG00000006534DDX39A9876.850Lepisosteus_oculatus
WBGene00001840hel-19478.607ENSLAFG00000022777DDX39A9877.143Loxodonta_africana
WBGene00001840hel-19976.134ENSMFAG00000044174DDX39A9876.850Macaca_fascicularis
WBGene00001840hel-19976.134ENSMMUG00000005723DDX39A9876.850Macaca_mulatta
WBGene00001840hel-19976.134ENSMNEG00000044292DDX39A9876.850Macaca_nemestrina
WBGene00001840hel-19976.134ENSMLEG00000007602DDX39A9876.850Mandrillus_leucophaeus
WBGene00001840hel-19479.104ENSMAMG00000000971ddx39aa9877.381Mastacembelus_armatus
WBGene00001840hel-19478.109ENSMAMG00000009916DDX39A9876.372Mastacembelus_armatus
WBGene00001840hel-19477.861ENSMZEG00005002864DDX39A9876.134Maylandia_zebra
WBGene00001840hel-19478.856ENSMZEG00005023935ddx39aa9877.143Maylandia_zebra
WBGene00001840hel-19976.850ENSMAUG00000008459Ddx399876.850Mesocricetus_auratus
WBGene00001840hel-19478.856ENSMICG00000015325DDX39A9877.381Microcebus_murinus
WBGene00001840hel-19876.739ENSMOCG00000016890Ddx399176.739Microtus_ochrogaster
WBGene00001840hel-19976.372ENSMMOG00000006328DDX39A9876.372Mola_mola
WBGene00001840hel-19478.109ENSMMOG00000008895-9876.429Mola_mola
WBGene00001840hel-19279.644ENSMODG00000002448DDX39A8676.722Monodelphis_domestica
WBGene00001840hel-19478.856ENSMALG00000022576ddx39aa9877.143Monopterus_albus
WBGene00001840hel-19478.607ENSMALG00000002697DDX39A9877.088Monopterus_albus
WBGene00001840hel-19977.327MGP_CAROLIEiJ_G0031277Ddx399877.327Mus_caroli
WBGene00001840hel-19977.327ENSMUSG00000005481Ddx399877.327Mus_musculus
WBGene00001840hel-19977.327MGP_PahariEiJ_G0022883Ddx399877.327Mus_pahari
WBGene00001840hel-19977.327MGP_SPRETEiJ_G0032396Ddx399877.327Mus_spretus
WBGene00001840hel-19479.104ENSMPUG00000003051DDX39A9877.619Mustela_putorius_furo
WBGene00001840hel-19271.247ENSMLUG00000013597-9868.735Myotis_lucifugus
WBGene00001840hel-19276.590ENSMLUG00000029622-9774.224Myotis_lucifugus
WBGene00001840hel-19277.354ENSMLUG00000000939-9874.940Myotis_lucifugus
WBGene00001840hel-19277.099ENSMLUG00000026217-9874.702Myotis_lucifugus
WBGene00001840hel-19278.117ENSMLUG00000028448-9875.656Myotis_lucifugus
WBGene00001840hel-19279.898ENSMLUG00000009280-9677.327Myotis_lucifugus
WBGene00001840hel-19977.088ENSNGAG00000010734Ddx399877.088Nannospalax_galili
WBGene00001840hel-19477.861ENSNBRG00000010679DDX39A9876.134Neolamprologus_brichardi
WBGene00001840hel-19478.856ENSNBRG00000001661ddx39aa9877.143Neolamprologus_brichardi
WBGene00001840hel-19970.883ENSNLEG00000013515DDX39A9871.599Nomascus_leucogenys
WBGene00001840hel-19267.008ENSMEUG00000005450DDX39A9965.228Notamacropus_eugenii
WBGene00001840hel-19278.626ENSODEG00000019523-9876.134Octodon_degus
WBGene00001840hel-19277.863ENSODEG00000009068-9875.418Octodon_degus
WBGene00001840hel-19273.791ENSODEG00000017817-9871.599Octodon_degus
WBGene00001840hel-19478.856ENSONIG00000018177ddx39aa9877.143Oreochromis_niloticus
WBGene00001840hel-19477.861ENSONIG00000008122DDX39A9876.134Oreochromis_niloticus
WBGene00001840hel-19769.324ENSOANG00000005137DDX39A9469.324Ornithorhynchus_anatinus
WBGene00001840hel-18455.956ENSOCUG00000002496DDX39A10055.956Oryctolagus_cuniculus
WBGene00001840hel-19478.358ENSORLG00000000279ddx39aa9876.667Oryzias_latipes
WBGene00001840hel-19976.190ENSORLG00000010565DDX39A9876.190Oryzias_latipes
WBGene00001840hel-19976.190ENSORLG00020004181DDX39A9876.190Oryzias_latipes_hni
WBGene00001840hel-19478.358ENSORLG00020019315ddx39aa9876.667Oryzias_latipes_hni
WBGene00001840hel-19976.190ENSORLG00015000447-9876.190Oryzias_latipes_hsok
WBGene00001840hel-19478.358ENSORLG00015019274ddx39aa9876.667Oryzias_latipes_hsok
WBGene00001840hel-19478.358ENSOMEG00000010444ddx39aa9777.033Oryzias_melastigma
WBGene00001840hel-19478.358ENSOMEG00000009789-9876.667Oryzias_melastigma
WBGene00001840hel-19970.167ENSOGAG00000025638-9870.238Otolemur_garnettii
WBGene00001840hel-19970.406ENSOGAG00000029626-9870.406Otolemur_garnettii
WBGene00001840hel-19478.856ENSOGAG00000010280-9877.381Otolemur_garnettii
WBGene00001840hel-19279.389ENSOARG00000005744DDX39A8976.905Ovis_aries
WBGene00001840hel-19976.134ENSPPAG00000040065DDX39A9876.850Pan_paniscus
WBGene00001840hel-19478.856ENSPPRG00000003506DDX39A9877.381Panthera_pardus
WBGene00001840hel-19478.856ENSPTIG00000017287DDX39A9877.381Panthera_tigris_altaica
WBGene00001840hel-19976.134ENSPTRG00000010590DDX39A9876.850Pan_troglodytes
WBGene00001840hel-19976.134ENSPTRG00000042673-9876.850Pan_troglodytes
WBGene00001840hel-19976.134ENSPANG00000015036DDX39A9876.850Papio_anubis
WBGene00001840hel-19976.905ENSPKIG00000006284DDX39A9876.905Paramormyrops_kingsleyae
WBGene00001840hel-19479.104ENSPKIG00000007272-9877.327Paramormyrops_kingsleyae
WBGene00001840hel-17279.479ENSPSIG00000011417DDX39A9979.479Pelodiscus_sinensis
WBGene00001840hel-19976.905ENSPMGG00000021765-9676.905Periophthalmus_magnuspinnatus
WBGene00001840hel-19478.856ENSPMGG00000016520DDX39A9777.458Periophthalmus_magnuspinnatus
WBGene00001840hel-19866.986ENSPEMG00000014184-9866.986Peromyscus_maniculatus_bairdii
WBGene00001840hel-19976.850ENSPEMG00000017767-9876.850Peromyscus_maniculatus_bairdii
WBGene00001840hel-19970.784ENSPMAG00000009017ddx39aa9870.784Petromyzon_marinus
WBGene00001840hel-19279.644ENSPCIG00000029788DDX39A9877.088Phascolarctos_cinereus
WBGene00001840hel-19976.190ENSPFOG00000000914ddx39aa9876.190Poecilia_formosa
WBGene00001840hel-19976.134ENSPFOG00000010070DDX39A9876.134Poecilia_formosa
WBGene00001840hel-19976.190ENSPLAG00000008645-9876.190Poecilia_latipinna
WBGene00001840hel-19976.134ENSPLAG00000009821DDX39A9876.134Poecilia_latipinna
WBGene00001840hel-19976.134ENSPMEG00000010187DDX39A9876.134Poecilia_mexicana
WBGene00001840hel-19976.190ENSPMEG00000021471-9876.190Poecilia_mexicana
WBGene00001840hel-19976.429ENSPREG00000017406ddx39aa9876.429Poecilia_reticulata
WBGene00001840hel-19976.134ENSPREG00000013989DDX39A9876.134Poecilia_reticulata
WBGene00001840hel-19976.134ENSPPYG00000009642DDX39A9876.850Pongo_abelii
WBGene00001840hel-19961.667ENSPCAG00000005768DDX39A9861.667Procavia_capensis
WBGene00001840hel-19476.866ENSPCOG00000027926-9875.476Propithecus_coquereli
WBGene00001840hel-19478.856ENSPCOG00000024047-9877.381Propithecus_coquereli
WBGene00001840hel-19279.898ENSPVAG00000006950DDX39A9877.327Pteropus_vampyrus
WBGene00001840hel-19477.861ENSPNYG00000001498DDX39A9876.134Pundamilia_nyererei
WBGene00001840hel-19478.856ENSPNYG00000016438-9877.143Pundamilia_nyererei
WBGene00001840hel-19478.607ENSPNAG00000014271DDX39A9876.611Pygocentrus_nattereri
WBGene00001840hel-19278.880ENSPNAG00000022623-9876.134Pygocentrus_nattereri
WBGene00001840hel-19977.088ENSRNOG00000004373Ddx39a9877.088Rattus_norvegicus
WBGene00001840hel-19976.134ENSRBIG00000036352DDX39A9876.850Rhinopithecus_bieti
WBGene00001840hel-19976.134ENSRROG00000027985DDX39A9876.850Rhinopithecus_roxellana
WBGene00001840hel-19280.000ENSSBOG00000034939DDX39A9877.088Saimiri_boliviensis_boliviensis
WBGene00001840hel-19279.644ENSSHAG00000005494DDX39A9877.088Sarcophilus_harrisii
WBGene00001840hel-19280.153ENSSFOG00015007928ddx39a9877.327Scleropages_formosus
WBGene00001840hel-19279.389ENSSFOG00015005701DDX39A9876.611Scleropages_formosus
WBGene00001840hel-19478.607ENSSMAG00000002831DDX39A9876.850Scophthalmus_maximus
WBGene00001840hel-19976.134ENSSMAG00000016567ddx39aa9876.134Scophthalmus_maximus
WBGene00001840hel-18179.009ENSSDUG00000009075DDX39A9979.009Seriola_dumerili
WBGene00001840hel-19478.607ENSSDUG00000020224ddx39aa9876.905Seriola_dumerili
WBGene00001840hel-19168.557ENSSLDG00000006386-9368.557Seriola_lalandi_dorsalis
WBGene00001840hel-18178.426ENSSLDG00000002882-9978.426Seriola_lalandi_dorsalis
WBGene00001840hel-19478.856ENSSLDG00000017643DDX39A9877.088Seriola_lalandi_dorsalis
WBGene00001840hel-19478.607ENSSPAG00000019372DDX39A9876.905Stegastes_partitus
WBGene00001840hel-19478.856ENSSPAG00000006186-9877.143Stegastes_partitus
WBGene00001840hel-18062.463ENSTRUG00000000807-9462.463Takifugu_rubripes
WBGene00001840hel-19478.109ENSTRUG00000022930DDX39A9876.429Takifugu_rubripes
WBGene00001840hel-19175.000ENSTRUG00000019985-9772.993Takifugu_rubripes
WBGene00001840hel-19478.607ENSTTRG00000007931DDX39A9877.143Tursiops_truncatus
WBGene00001840hel-19478.856ENSUAMG00000020022DDX39A9877.327Ursus_americanus
WBGene00001840hel-19478.856ENSUMAG00000004317DDX39A9777.327Ursus_maritimus
WBGene00001840hel-19478.856ENSVVUG00000026939DDX39A9877.381Vulpes_vulpes
WBGene00001840hel-19976.667ENSXETG00000020607ddx39a9876.667Xenopus_tropicalis
WBGene00001840hel-19976.429ENSXCOG00000015586DDX39A9876.429Xiphophorus_couchianus
WBGene00001840hel-19976.429ENSXMAG00000006547ddx39aa9876.429Xiphophorus_maculatus
WBGene00001840hel-19976.134ENSXMAG00000008939DDX39A9876.134Xiphophorus_maculatus

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