EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00001865 (Gene tree)
Gene ID: -
Gene Symbol: him-6
Alias: -
Full Name: Bloom syndrome protein homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4508 bases
Position: chrIV:12490791-12495298
Accession: O18017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T04A11	HRDC	PF00570.23	7.6e-12	1	1
T04A11	DEAD	PF00270.29	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T04A11.6	-	3132	NM_069989	T04A11.6	988 (aa)	NP_502390	O18017

Gene Model

Click here to download WBGene00001865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00001865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00001865	him-6	61	34.528	WBGene00019334	K02F3.12	96	34.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00001865	him-6	71	38.194	ENSAPOG00000017966	blm	50	38.194	Acanthochromis_polyacanthus
WBGene00001865	him-6	66	41.272	ENSAPLG00000006878	BLM	53	41.272	Anas_platyrhynchos
WBGene00001865	him-6	66	40.059	ENSCAFG00020016111	BLM	77	40.059	Canis_lupus_dingo
WBGene00001865	him-6	66	40.653	ENSCATG00000040609	BLM	70	51.579	Cercocebus_atys
WBGene00001865	him-6	77	38.610	ENSCPBG00000025000	BLM	67	38.610	Chrysemys_picta_bellii
WBGene00001865	him-6	70	40.000	ENSCSEG00000013483	blm	57	38.306	Cynoglossus_semilaevis
WBGene00001865	him-6	66	40.569	ENSDORG00000011033	Blm	77	36.417	Dipodomys_ordii
WBGene00001865	him-6	78	36.637	FBgn0002906	Blm	52	36.576	Drosophila_melanogaster
WBGene00001865	him-6	61	41.063	ENSEBUG00000015743	-	85	41.063	Eptatretus_burgeri
WBGene00001865	him-6	79	37.531	ENSELUG00000019098	blm	56	36.523	Esox_lucius
WBGene00001865	him-6	66	41.940	ENSFALG00000010981	BLM	51	41.940	Ficedula_albicollis
WBGene00001865	him-6	79	37.591	ENSGMOG00000016431	blm	76	38.990	Gadus_morhua
WBGene00001865	him-6	72	39.353	ENSGAFG00000001117	blm	62	36.406	Gambusia_affinis
WBGene00001865	him-6	75	37.806	ENSGACG00000010863	blm	99	44.991	Gasterosteus_aculeatus
WBGene00001865	him-6	71	39.256	ENSGAGG00000005383	BLM	69	38.981	Gopherus_agassizii
WBGene00001865	him-6	66	40.653	ENSGGOG00000007710	BLM	70	51.579	Gorilla_gorilla
WBGene00001865	him-6	85	37.117	ENSHCOG00000011455	blm	68	39.831	Hippocampus_comes
WBGene00001865	him-6	75	38.592	ENSIPUG00000000529	blm	57	40.757	Ictalurus_punctatus
WBGene00001865	him-6	75	36.662	ENSJJAG00000016322	Blm	53	55.710	Jaculus_jaculus
WBGene00001865	him-6	82	36.730	ENSKMAG00000016608	blm	53	37.672	Kryptolebias_marmoratus
WBGene00001865	him-6	72	37.723	ENSLBEG00000018729	blm	79	37.723	Labrus_bergylta
WBGene00001865	him-6	83	36.014	ENSLOCG00000014302	blm	62	34.983	Lepisosteus_oculatus
WBGene00001865	him-6	66	40.653	ENSMFAG00000042982	BLM	70	51.930	Macaca_fascicularis
WBGene00001865	him-6	66	40.801	ENSMMUG00000019526	BLM	70	51.930	Macaca_mulatta
WBGene00001865	him-6	66	40.801	ENSMNEG00000031251	BLM	70	51.930	Macaca_nemestrina
WBGene00001865	him-6	66	38.724	ENSNLEG00000012087	BLM	60	38.144	Nomascus_leucogenys
WBGene00001865	him-6	66	38.626	ENSODEG00000015373	BLM	60	38.626	Octodon_degus
WBGene00001865	him-6	74	38.633	ENSOANG00000009316	-	82	41.053	Ornithorhynchus_anatinus
WBGene00001865	him-6	77	37.310	ENSORLG00015018640	blm	67	39.542	Oryzias_latipes_hsok
WBGene00001865	him-6	66	40.801	ENSPANG00000018572	BLM	70	51.930	Papio_anubis
WBGene00001865	him-6	58	38.946	ENSPSIG00000009792	BLM	99	38.946	Pelodiscus_sinensis
WBGene00001865	him-6	70	39.076	ENSPMGG00000006629	blm	74	39.076	Periophthalmus_magnuspinnatus
WBGene00001865	him-6	66	41.529	ENSPMAG00000000445	blm	86	42.027	Petromyzon_marinus
WBGene00001865	him-6	77	37.927	ENSPFOG00000005059	blm	58	36.457	Poecilia_formosa
WBGene00001865	him-6	71	39.667	ENSPLAG00000017344	blm	61	35.548	Poecilia_latipinna
WBGene00001865	him-6	66	40.653	ENSRBIG00000029656	BLM	70	51.930	Rhinopithecus_bieti
WBGene00001865	him-6	66	40.653	ENSRROG00000037871	BLM	70	51.930	Rhinopithecus_roxellana
WBGene00001865	him-6	70	40.358	ENSSFOG00015015462	blm	55	40.358	Scleropages_formosus
WBGene00001865	him-6	76	37.372	ENSSPUG00000000013	BLM	66	36.802	Sphenodon_punctatus
WBGene00001865	him-6	66	40.238	ENSTGUG00000009959	-	56	40.238	Taeniopygia_guttata
WBGene00001865	him-6	82	37.873	ENSTNIG00000019246	blm	58	37.998	Tetraodon_nigroviridis
WBGene00001865	him-6	66	40.387	ENSUMAG00000009105	BLM	84	40.356	Ursus_maritimus