EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00002061 (Gene tree)
Gene ID: -
Gene Symbol: ife-3
Alias: -
Full Name: Eukaryotic translation initiation factor 4E-3
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1235 bases
Position: chrV:6588-7822
Accession: O61955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
B0348	IF4E	PF01652.18	2.3e-53	1	1
B0348	IF4E	PF01652.18	2.3e-53	1	1
B0348	IF4E	PF01652.18	5.1e-53	1	1
B0348	IF4E	PF01652.18	5.1e-53	1	1
B0348	IF4E	PF01652.18	6.1e-53	1	1
B0348	IF4E	PF01652.18	6.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
B0348.6a.2	-	940	NM_070723	B0348.6a.2	248 (aa)	NP_503124	UPI000012D3CD
B0348.6a.1	-	1094	-	B0348.6a.1	248 (aa)	-	UPI000012D3CD
B0348.6b.1	-	949	NM_070722	B0348.6b.1	251 (aa)	NP_503123	O61955
B0348.6b.2	-	1108	-	B0348.6b.2	251 (aa)	-	O61955
B0348.6c.1	-	1100	-	B0348.6c.1	250 (aa)	-	UPI000007A753
B0348.6c.2	-	946	NM_171920	B0348.6c.2	250 (aa)	NP_741502	UPI000007A753

Gene Model

Click here to download WBGene00002061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00002061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00002061	ife-3	78	48.515	WBGene00002059	ife-1	94	48.500
WBGene00002061	ife-3	74	41.885	WBGene00002063	ife-5	95	41.885
WBGene00002061	ife-3	70	35.196	WBGene00002062	ife-4	81	35.196
WBGene00002061	ife-3	83	43.721	WBGene00002060	ife-2	94	43.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00002061	ife-3	82	50.000	ENSAPOG00000019534	eif4e1c	97	50.000	Acanthochromis_polyacanthus
WBGene00002061	ife-3	70	52.601	ENSACIG00000021242	eif4e1c	96	52.601	Amphilophus_citrinellus
WBGene00002061	ife-3	82	49.510	ENSAOCG00000004344	eif4e1c	97	49.510	Amphiprion_ocellaris
WBGene00002061	ife-3	83	48.780	ENSAPEG00000013289	eif4e1c	98	49.254	Amphiprion_percula
WBGene00002061	ife-3	82	49.020	ENSATEG00000001670	eif4e1c	96	51.596	Anabas_testudineus
WBGene00002061	ife-3	74	53.261	ENSACLG00000011119	eif4e1c	87	53.846	Astatotilapia_calliptera
WBGene00002061	ife-3	82	47.549	ENSAMXG00000029997	eif4e1c	97	47.549	Astyanax_mexicanus
WBGene00002061	ife-3	74	52.174	ENSCSEG00000006680	eif4e1c	85	52.747	Cynoglossus_semilaevis
WBGene00002061	ife-3	84	49.528	ENSCVAG00000013853	eif4e1c	98	50.000	Cyprinodon_variegatus
WBGene00002061	ife-3	75	52.151	ENSDARG00000012274	eif4e1c	96	47.321	Danio_rerio
WBGene00002061	ife-3	73	52.486	ENSELUG00000022791	eif4e1c	82	52.486	Esox_lucius
WBGene00002061	ife-3	81	50.746	ENSFHEG00000002097	eif4e1c	93	50.746	Fundulus_heteroclitus
WBGene00002061	ife-3	72	51.955	ENSGMOG00000006731	eif4e1c	87	52.542	Gadus_morhua
WBGene00002061	ife-3	84	50.472	ENSGAFG00000009446	eif4e1c	98	50.952	Gambusia_affinis
WBGene00002061	ife-3	74	54.348	ENSGACG00000007799	eif4e1c	96	50.000	Gasterosteus_aculeatus
WBGene00002061	ife-3	74	53.261	ENSHBUG00000022939	eif4e1c	87	53.846	Haplochromis_burtoni
WBGene00002061	ife-3	73	53.039	ENSHCOG00000004116	eif4e1c	87	53.039	Hippocampus_comes
WBGene00002061	ife-3	76	52.850	ENSIPUG00000005027	if4e	91	52.850	Ictalurus_punctatus
WBGene00002061	ife-3	84	50.000	ENSKMAG00000004557	eif4e1c	98	50.476	Kryptolebias_marmoratus
WBGene00002061	ife-3	74	53.261	ENSLBEG00000007011	eif4e1c	86	53.846	Labrus_bergylta
WBGene00002061	ife-3	82	40.580	ENSLACG00000015230	eif4e1c	94	40.976	Latimeria_chalumnae
WBGene00002061	ife-3	76	51.852	ENSLOCG00000009334	eif4e1c	88	51.852	Lepisosteus_oculatus
WBGene00002061	ife-3	82	49.020	ENSMAMG00000000450	eif4e1c	97	49.020	Mastacembelus_armatus
WBGene00002061	ife-3	74	53.261	ENSMZEG00005027687	eif4e1c	87	53.846	Maylandia_zebra
WBGene00002061	ife-3	82	50.246	ENSMMOG00000010487	eif4e1c	97	50.246	Mola_mola
WBGene00002061	ife-3	82	50.000	ENSMALG00000018219	eif4e1c	97	50.000	Monopterus_albus
WBGene00002061	ife-3	74	53.261	ENSNBRG00000020784	eif4e1c	85	53.846	Neolamprologus_brichardi
WBGene00002061	ife-3	74	53.261	ENSONIG00000018400	eif4e1c	87	53.846	Oreochromis_niloticus
WBGene00002061	ife-3	78	50.254	ENSORLG00000019400	eif4e1c	89	50.515	Oryzias_latipes
WBGene00002061	ife-3	73	52.486	ENSORLG00020003856	eif4e1c	86	52.486	Oryzias_latipes_hni
WBGene00002061	ife-3	73	52.486	ENSORLG00015009011	eif4e1c	86	52.486	Oryzias_latipes_hsok
WBGene00002061	ife-3	84	49.057	ENSOMEG00000003911	eif4e1c	98	49.524	Oryzias_melastigma
WBGene00002061	ife-3	74	52.717	ENSPKIG00000009484	eif4e1c	95	51.777	Paramormyrops_kingsleyae
WBGene00002061	ife-3	76	53.191	ENSPMGG00000010390	eif4e1c	83	53.191	Periophthalmus_magnuspinnatus
WBGene00002061	ife-3	84	50.472	ENSPFOG00000002854	eif4e1c	98	50.952	Poecilia_formosa
WBGene00002061	ife-3	84	50.472	ENSPLAG00000009606	eif4e1c	97	51.977	Poecilia_latipinna
WBGene00002061	ife-3	84	50.472	ENSPMEG00000003072	eif4e1c	98	50.952	Poecilia_mexicana
WBGene00002061	ife-3	84	50.472	ENSPREG00000018571	eif4e1c	97	51.977	Poecilia_reticulata
WBGene00002061	ife-3	74	53.261	ENSPNYG00000007444	eif4e1c	87	53.846	Pundamilia_nyererei
WBGene00002061	ife-3	84	48.325	ENSPNAG00000027050	eif4e1c	98	48.792	Pygocentrus_nattereri
WBGene00002061	ife-3	82	47.826	ENSSFOG00015002672	eif4e1c	98	47.826	Scleropages_formosus
WBGene00002061	ife-3	82	49.510	ENSSMAG00000002255	eif4e1c	97	49.510	Scophthalmus_maximus
WBGene00002061	ife-3	82	49.020	ENSSDUG00000009117	eif4e1c	97	49.020	Seriola_dumerili
WBGene00002061	ife-3	82	49.020	ENSSLDG00000019869	eif4e1c	97	49.020	Seriola_lalandi_dorsalis
WBGene00002061	ife-3	82	49.020	ENSSPAG00000021325	eif4e1c	86	49.020	Stegastes_partitus
WBGene00002061	ife-3	76	52.381	ENSTRUG00000024897	eif4e1c	87	52.381	Takifugu_rubripes
WBGene00002061	ife-3	76	45.745	ENSTNIG00000008670	eif4e1c	90	45.745	Tetraodon_nigroviridis
WBGene00002061	ife-3	84	50.472	ENSXCOG00000012418	eif4e1c	97	51.977	Xiphophorus_couchianus
WBGene00002061	ife-3	84	50.472	ENSXMAG00000023567	eif4e1c	98	50.952	Xiphophorus_maculatus