EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00002078 (Gene tree)
Gene ID
-
Gene Symbol
xpo-1
Alias
-
Full Name
EXPOrtin (Nuclear export receptor)
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
putative
Strand
Plus strand
Length
9593 bases
Position
chrV:7805064-7814656
Accession
Q8MPS6
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ZK742CRM1_CPF08767.114.1e-11611
ZK742CRM1_CPF08767.114.1e-11611
ZK742CRM1_CPF08767.114.1e-11611
ZK742CRM1_CPF08767.114.7e-0711
ZK742CRM1_CPF08767.114.7e-0711
ZK742CRM1_CPF08767.114.7e-0711
ZK742Xpo1PF08389.123.2e-3811
ZK742Xpo1PF08389.123.2e-3811
ZK742Xpo1PF08389.123.2e-3811
ZK742IBN_NPF03810.198.3e-1211
ZK742IBN_NPF03810.198.3e-1211
ZK742IBN_NPF03810.198.3e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ZK742.1b.1-1211-ZK742.1b.179 (aa)NP_741568Q8MPS6
ZK742.1b.3-1442-ZK742.1b.379 (aa)NP_741568Q8MPS6
ZK742.1b.2-1400-ZK742.1b.279 (aa)NP_741568Q8MPS6
ZK742.1a.2-4278NM_171484ZK742.1a.21080 (aa)NP_741567Q23089
ZK742.1a.3-4262NM_171484ZK742.1a.31080 (aa)NP_741567Q23089
ZK742.1a.1-4089NM_171484ZK742.1a.11080 (aa)NP_741567Q23089
Gene Model
Click here to download WBGene00002078's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00002078's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00002078xpo-19951.479ENSG00000082898XPO19951.479Homo_sapiens
WBGene00002078xpo-19152.632ENSAPOG00000002354xpo1a9951.106Acanthochromis_polyacanthus
WBGene00002078xpo-19951.664ENSAPOG00000004984-9951.664Acanthochromis_polyacanthus
WBGene00002078xpo-19951.893ENSAMEG00000003460XPO19951.893Ailuropoda_melanoleuca
WBGene00002078xpo-19152.632ENSACIG00000010259xpo1a9952.898Amphilophus_citrinellus
WBGene00002078xpo-19153.947ENSACIG00000010818-9953.158Amphilophus_citrinellus
WBGene00002078xpo-19951.756ENSAOCG00000010121-9952.421Amphiprion_ocellaris
WBGene00002078xpo-19852.260ENSAOCG00000018914xpo1a9852.260Amphiprion_ocellaris
WBGene00002078xpo-19152.632ENSAPEG00000006583xpo1a9952.594Amphiprion_percula
WBGene00002078xpo-19951.756ENSAPEG00000007038-9952.526Amphiprion_percula
WBGene00002078xpo-19951.756ENSATEG00000008816-9951.756Anabas_testudineus
WBGene00002078xpo-19951.711ENSATEG00000020750xpo1a9951.711Anabas_testudineus
WBGene00002078xpo-19951.941ENSAPLG00000004008XPO19951.941Anas_platyrhynchos
WBGene00002078xpo-19951.848ENSACAG00000002501XPO19951.848Anolis_carolinensis
WBGene00002078xpo-19951.479ENSANAG00000020802XPO19951.479Aotus_nancymaae
WBGene00002078xpo-19951.941ENSACLG00000015192-9951.941Astatotilapia_calliptera
WBGene00002078xpo-19152.632ENSACLG00000015669xpo1a9953.003Astatotilapia_calliptera
WBGene00002078xpo-19153.947ENSAMXG00000003069xpo1a9952.991Astyanax_mexicanus
WBGene00002078xpo-19952.033ENSAMXG00000012704xpo1b9953.102Astyanax_mexicanus
WBGene00002078xpo-19951.941ENSBTAG00000013254XPO19951.941Bos_taurus
WBGene00002078xpo-19951.479ENSCJAG00000008877XPO19951.479Callithrix_jacchus
WBGene00002078xpo-19951.941ENSCAFG00000003050XPO19951.941Canis_familiaris
WBGene00002078xpo-19353.017ENSCAFG00020026910XPO19953.017Canis_lupus_dingo
WBGene00002078xpo-19951.941ENSCHIG00000018132XPO19951.941Capra_hircus
WBGene00002078xpo-19951.941ENSTSYG00000004330XPO19951.941Carlito_syrichta
WBGene00002078xpo-19152.632ENSCAPG00000006454-9952.743Cavia_aperea
WBGene00002078xpo-19951.535ENSCPOG00000034053XPO19951.535Cavia_porcellus
WBGene00002078xpo-18843.246ENSCCAG00000037445XPO19151.920Cebus_capucinus
WBGene00002078xpo-19950.276ENSCATG00000032674XPO19953.158Cercocebus_atys
WBGene00002078xpo-19951.848ENSCLAG00000012953XPO19951.848Chinchilla_lanigera
WBGene00002078xpo-19951.479ENSCSAG00000014606XPO19951.479Chlorocebus_sabaeus
WBGene00002078xpo-18353.777ENSCHOG00000012088XPO18253.777Choloepus_hoffmanni
WBGene00002078xpo-19951.941ENSCPBG00000026239XPO19951.941Chrysemys_picta_bellii
WBGene00002078xpo-19852.256ENSCING00000024562-9852.256Ciona_intestinalis
WBGene00002078xpo-19851.921ENSCSAVG00000005965-9851.921Ciona_savignyi
WBGene00002078xpo-19950.277ENSCANG00000028883XPO19954.336Colobus_angolensis_palliatus
WBGene00002078xpo-19951.479ENSCGRG00001000263Xpo19951.479Cricetulus_griseus_chok1gshd
WBGene00002078xpo-19951.479ENSCGRG00000001520Xpo19951.479Cricetulus_griseus_crigri
WBGene00002078xpo-19152.632ENSCSEG00000001693XPO19952.532Cynoglossus_semilaevis
WBGene00002078xpo-19951.941ENSCVAG00000016788-9951.941Cyprinodon_variegatus
WBGene00002078xpo-19852.072ENSCVAG00000016558xpo1a9852.072Cyprinodon_variegatus
WBGene00002078xpo-19851.929ENSDARG00000078041xpo1a9756.075Danio_rerio
WBGene00002078xpo-19951.941ENSDARG00000063229xpo1b9951.941Danio_rerio
WBGene00002078xpo-19951.941ENSDNOG00000005805XPO19951.941Dasypus_novemcinctus
WBGene00002078xpo-18855.556ENSDORG00000013050Xpo19955.556Dipodomys_ordii
WBGene00002078xpo-19949.540FBgn0020497emb9949.540Drosophila_melanogaster
WBGene00002078xpo-19450.631ENSETEG00000018045XPO19350.631Echinops_telfairi
WBGene00002078xpo-19152.632ENSEBUG00000012580-9360.000Eptatretus_burgeri
WBGene00002078xpo-19951.941ENSEASG00005007223XPO19951.941Equus_asinus_asinus
WBGene00002078xpo-19656.957ENSECAG00000024920XPO19956.957Equus_caballus
WBGene00002078xpo-19155.556ENSEEUG00000009479XPO19155.556Erinaceus_europaeus
WBGene00002078xpo-19151.316ENSELUG00000012707xpo1a9952.842Esox_lucius
WBGene00002078xpo-19152.632ENSELUG00000014306-9850.370Esox_lucius
WBGene00002078xpo-19951.941ENSFCAG00000002702XPO19951.941Felis_catus
WBGene00002078xpo-19951.941ENSFALG00000010989XPO19951.941Ficedula_albicollis
WBGene00002078xpo-19951.294ENSFDAG00000014716XPO19951.294Fukomys_damarensis
WBGene00002078xpo-19852.260ENSFHEG00000002412xpo1a9852.260Fundulus_heteroclitus
WBGene00002078xpo-19651.250ENSFHEG00000018974-9459.845Fundulus_heteroclitus
WBGene00002078xpo-19252.596ENSGMOG00000019063-9352.596Gadus_morhua
WBGene00002078xpo-19951.676ENSGMOG00000004441xpo1a9951.676Gadus_morhua
WBGene00002078xpo-19951.941ENSGALG00000029476XPO19951.941Gallus_gallus
WBGene00002078xpo-19151.316ENSGAFG00000004408xpo1a9952.898Gambusia_affinis
WBGene00002078xpo-19153.947ENSGAFG00000003355-9952.371Gambusia_affinis
WBGene00002078xpo-19852.448ENSGACG00000019736xpo1a9852.448Gasterosteus_aculeatus
WBGene00002078xpo-19852.587ENSGACG00000002743-9951.941Gasterosteus_aculeatus
WBGene00002078xpo-19951.941ENSGAGG00000017558XPO19951.941Gopherus_agassizii
WBGene00002078xpo-19951.479ENSGGOG00000034878XPO19951.479Gorilla_gorilla
WBGene00002078xpo-19852.260ENSHBUG00000007128xpo1a9852.260Haplochromis_burtoni
WBGene00002078xpo-19951.941ENSHBUG00000020037-9951.941Haplochromis_burtoni
WBGene00002078xpo-19951.848ENSHGLG00000003115XPO19951.848Heterocephalus_glaber_female
WBGene00002078xpo-19951.848ENSHGLG00100012227XPO19951.848Heterocephalus_glaber_male
WBGene00002078xpo-19152.632ENSHCOG00000006949XPO19953.053Hippocampus_comes
WBGene00002078xpo-19952.126ENSIPUG00000012891Xpo19952.126Ictalurus_punctatus
WBGene00002078xpo-19852.211ENSIPUG00000024394XPO19852.211Ictalurus_punctatus
WBGene00002078xpo-19951.941ENSSTOG00000016122XPO19951.941Ictidomys_tridecemlineatus
WBGene00002078xpo-19951.941ENSJJAG00000020468Xpo19951.941Jaculus_jaculus
WBGene00002078xpo-19951.848ENSKMAG00000016218-9951.848Kryptolebias_marmoratus
WBGene00002078xpo-19852.448ENSKMAG00000004830xpo1a9852.448Kryptolebias_marmoratus
WBGene00002078xpo-19151.316ENSLBEG00000002104xpo1a9951.731Labrus_bergylta
WBGene00002078xpo-19852.493ENSLBEG00000005740-9951.848Labrus_bergylta
WBGene00002078xpo-19152.632ENSLACG00000018213XPO19937.602Latimeria_chalumnae
WBGene00002078xpo-19951.797ENSLOCG00000016095xpo1b9951.797Lepisosteus_oculatus
WBGene00002078xpo-19951.756ENSLAFG00000014553XPO19951.756Loxodonta_africana
WBGene00002078xpo-19951.479ENSMFAG00000038679XPO19951.479Macaca_fascicularis
WBGene00002078xpo-19951.479ENSMMUG00000006941XPO19951.479Macaca_mulatta
WBGene00002078xpo-19951.479ENSMNEG00000030909XPO19951.479Macaca_nemestrina
WBGene00002078xpo-19950.276ENSMLEG00000032004XPO19950.276Mandrillus_leucophaeus
WBGene00002078xpo-19951.848ENSMAMG00000010568-9853.165Mastacembelus_armatus
WBGene00002078xpo-19852.260ENSMAMG00000023037xpo1a9952.673Mastacembelus_armatus
WBGene00002078xpo-19852.260ENSMZEG00005005105xpo1a9852.260Maylandia_zebra
WBGene00002078xpo-19951.941ENSMZEG00005018158-9852.642Maylandia_zebra
WBGene00002078xpo-19152.632ENSMGAG00000001496-9956.846Meleagris_gallopavo
WBGene00002078xpo-19951.479ENSMAUG00000006769Xpo19951.479Mesocricetus_auratus
WBGene00002078xpo-19951.941ENSMICG00000027770XPO19951.941Microcebus_murinus
WBGene00002078xpo-19951.571ENSMOCG00000012169Xpo19951.571Microtus_ochrogaster
WBGene00002078xpo-19151.316ENSMMOG00000018767xpo1a9952.792Mola_mola
WBGene00002078xpo-19152.632ENSMMOG00000008001-9952.947Mola_mola
WBGene00002078xpo-19951.705ENSMODG00000002831XPO19951.705Monodelphis_domestica
WBGene00002078xpo-19951.664ENSMALG00000007085-9952.282Monopterus_albus
WBGene00002078xpo-19151.316ENSMALG00000008617xpo1a9952.681Monopterus_albus
WBGene00002078xpo-19951.479MGP_CAROLIEiJ_G0016136Xpo110055.957Mus_caroli
WBGene00002078xpo-19951.571ENSMUSG00000020290Xpo19955.957Mus_musculus
WBGene00002078xpo-19951.571MGP_PahariEiJ_G0016754Xpo110055.957Mus_pahari
WBGene00002078xpo-19951.571MGP_SPRETEiJ_G0016979Xpo110055.957Mus_spretus
WBGene00002078xpo-19951.941ENSMPUG00000005560XPO19951.941Mustela_putorius_furo
WBGene00002078xpo-19951.982ENSMLUG00000010670XPO19951.982Myotis_lucifugus
WBGene00002078xpo-19951.848ENSNGAG00000022158Xpo19951.848Nannospalax_galili
WBGene00002078xpo-19852.260ENSNBRG00000003776xpo1a9852.260Neolamprologus_brichardi
WBGene00002078xpo-19651.688ENSNBRG00000012229-9953.263Neolamprologus_brichardi
WBGene00002078xpo-19949.369ENSNLEG00000009680XPO19949.369Nomascus_leucogenys
WBGene00002078xpo-16155.556ENSMEUG00000013277-6155.556Notamacropus_eugenii
WBGene00002078xpo-19152.632ENSOPRG00000012615XPO19053.001Ochotona_princeps
WBGene00002078xpo-19951.201ENSODEG00000012632XPO19951.201Octodon_degus
WBGene00002078xpo-19353.023ENSONIG00000002969-9953.023Oreochromis_niloticus
WBGene00002078xpo-19851.695ENSONIG00000000019xpo1a9855.817Oreochromis_niloticus
WBGene00002078xpo-19652.936ENSOANG00000012417XPO19952.936Ornithorhynchus_anatinus
WBGene00002078xpo-19951.941ENSOCUG00000004986XPO19951.941Oryctolagus_cuniculus
WBGene00002078xpo-19851.977ENSORLG00000001559xpo1a9851.977Oryzias_latipes
WBGene00002078xpo-19952.126ENSORLG00000001642-9952.230Oryzias_latipes
WBGene00002078xpo-19952.126ENSORLG00020020577-9952.230Oryzias_latipes_hni
WBGene00002078xpo-19851.977ENSORLG00020015852xpo1a9851.977Oryzias_latipes_hni
WBGene00002078xpo-19851.977ENSORLG00015015414xpo1a9952.105Oryzias_latipes_hsok
WBGene00002078xpo-19352.428ENSORLG00015008640-9952.674Oryzias_latipes_hsok
WBGene00002078xpo-19952.126ENSOMEG00000001384-9953.376Oryzias_melastigma
WBGene00002078xpo-19152.632ENSOMEG00000007343xpo1a9952.792Oryzias_melastigma
WBGene00002078xpo-19950.230ENSOGAG00000000143XPO19950.230Otolemur_garnettii
WBGene00002078xpo-19951.893ENSOARG00000020174XPO19951.893Ovis_aries
WBGene00002078xpo-19951.479ENSPPAG00000029699XPO19951.479Pan_paniscus
WBGene00002078xpo-19951.941ENSPPRG00000024625XPO19951.941Panthera_pardus
WBGene00002078xpo-19951.941ENSPTIG00000012259XPO19951.941Panthera_tigris_altaica
WBGene00002078xpo-19951.479ENSPTRG00000011962XPO19951.479Pan_troglodytes
WBGene00002078xpo-19951.479ENSPANG00000006892XPO19951.479Papio_anubis
WBGene00002078xpo-19951.941ENSPKIG00000003545xpo1b9953.032Paramormyrops_kingsleyae
WBGene00002078xpo-19952.311ENSPKIG00000005688XPO19952.311Paramormyrops_kingsleyae
WBGene00002078xpo-19951.287ENSPSIG00000014457XPO19953.326Pelodiscus_sinensis
WBGene00002078xpo-19951.386ENSPMGG00000010632XPO19951.479Periophthalmus_magnuspinnatus
WBGene00002078xpo-19151.316ENSPMGG00000019000XPO19952.248Periophthalmus_magnuspinnatus
WBGene00002078xpo-19951.571ENSPEMG00000010103Xpo19951.571Peromyscus_maniculatus_bairdii
WBGene00002078xpo-19951.911ENSPMAG00000001270-9951.911Petromyzon_marinus
WBGene00002078xpo-19153.947ENSPMAG00000003656-9845.113Petromyzon_marinus
WBGene00002078xpo-19952.074ENSPCIG00000027737XPO19952.074Phascolarctos_cinereus
WBGene00002078xpo-19852.072ENSPFOG00000001349xpo1a9852.072Poecilia_formosa
WBGene00002078xpo-19951.756ENSPFOG00000013233-9951.756Poecilia_formosa
WBGene00002078xpo-19951.848ENSPLAG00000018279-9951.848Poecilia_latipinna
WBGene00002078xpo-19852.072ENSPLAG00000000356xpo1a9951.840Poecilia_latipinna
WBGene00002078xpo-19951.661ENSPMEG00000003904-9951.661Poecilia_mexicana
WBGene00002078xpo-19852.072ENSPMEG00000003659xpo1a9852.072Poecilia_mexicana
WBGene00002078xpo-19951.848ENSPREG00000010135-9952.371Poecilia_reticulata
WBGene00002078xpo-19852.166ENSPREG00000020796xpo1a9852.166Poecilia_reticulata
WBGene00002078xpo-19950.185ENSPPYG00000012383XPO19950.185Pongo_abelii
WBGene00002078xpo-19650.864ENSPCAG00000006798XPO19950.864Procavia_capensis
WBGene00002078xpo-19951.941ENSPCOG00000023123XPO19951.941Propithecus_coquereli
WBGene00002078xpo-19152.632ENSPVAG00000002535XPO18152.709Pteropus_vampyrus
WBGene00002078xpo-19852.260ENSPNYG00000023463xpo1a9852.260Pundamilia_nyererei
WBGene00002078xpo-19153.947ENSPNYG00000006874-9952.128Pundamilia_nyererei
WBGene00002078xpo-19952.033ENSPNAG00000008916xpo1b9952.033Pygocentrus_nattereri
WBGene00002078xpo-19852.493ENSPNAG00000014209xpo1a9852.493Pygocentrus_nattereri
WBGene00002078xpo-19951.479ENSRNOG00000009935Xpo19951.479Rattus_norvegicus
WBGene00002078xpo-19946.409ENSRBIG00000029189XPO19946.409Rhinopithecus_bieti
WBGene00002078xpo-19951.479ENSRROG00000038442XPO19951.479Rhinopithecus_roxellana
WBGene00002078xpo-19841.858YGR218WCRM19941.858Saccharomyces_cerevisiae
WBGene00002078xpo-19949.538ENSSBOG00000034467XPO19950.148Saimiri_boliviensis_boliviensis
WBGene00002078xpo-19951.982ENSSHAG00000011230XPO19951.982Sarcophilus_harrisii
WBGene00002078xpo-19952.218ENSSFOG00015001881XPO19952.218Scleropages_formosus
WBGene00002078xpo-19952.033ENSSFOG00015011598xpo1b9952.033Scleropages_formosus
WBGene00002078xpo-19951.941ENSSMAG00000015718-9951.941Scophthalmus_maximus
WBGene00002078xpo-19852.354ENSSMAG00000021007xpo1a9852.354Scophthalmus_maximus
WBGene00002078xpo-19951.848ENSSDUG00000017709-9953.059Seriola_dumerili
WBGene00002078xpo-19152.632ENSSDUG00000000812xpo1a9952.575Seriola_dumerili
WBGene00002078xpo-19152.632ENSSLDG00000017407xpo1a9453.176Seriola_lalandi_dorsalis
WBGene00002078xpo-19951.848ENSSLDG00000019530-9953.059Seriola_lalandi_dorsalis
WBGene00002078xpo-19152.632ENSSARG00000014000-8954.337Sorex_araneus
WBGene00002078xpo-19951.797ENSSPUG00000009057XPO19952.879Sphenodon_punctatus
WBGene00002078xpo-19951.756ENSSPAG00000008738-9952.371Stegastes_partitus
WBGene00002078xpo-19852.260ENSSPAG00000010307xpo1a9852.260Stegastes_partitus
WBGene00002078xpo-19951.941ENSSSCG00000028228XPO19953.863Sus_scrofa
WBGene00002078xpo-19951.512ENSTGUG00000006512XPO19951.512Taeniopygia_guttata
WBGene00002078xpo-19852.354ENSTRUG00000001415xpo1a9852.354Takifugu_rubripes
WBGene00002078xpo-19852.587ENSTRUG00000005571-9952.727Takifugu_rubripes
WBGene00002078xpo-19950.416ENSTNIG00000003360xpo1a9950.416Tetraodon_nigroviridis
WBGene00002078xpo-19153.947ENSTNIG00000005196-9344.361Tetraodon_nigroviridis
WBGene00002078xpo-16061.146ENSTBEG00000014485-6661.146Tupaia_belangeri
WBGene00002078xpo-19052.507ENSTTRG00000013369XPO19552.507Tursiops_truncatus
WBGene00002078xpo-19951.941ENSUAMG00000026512XPO19951.941Ursus_americanus
WBGene00002078xpo-19951.941ENSUMAG00000019859XPO19951.941Ursus_maritimus
WBGene00002078xpo-19549.952ENSVPAG00000011446XPO19949.470Vicugna_pacos
WBGene00002078xpo-19951.941ENSVVUG00000012009XPO19951.941Vulpes_vulpes
WBGene00002078xpo-19951.721ENSXETG00000002224xpo19951.201Xenopus_tropicalis
WBGene00002078xpo-19153.947ENSXCOG00000006625-9945.158Xiphophorus_couchianus
WBGene00002078xpo-19151.316ENSXCOG00000011889XPO19952.898Xiphophorus_couchianus
WBGene00002078xpo-19951.756ENSXMAG00000007353-9951.756Xiphophorus_maculatus
WBGene00002078xpo-19852.072ENSXMAG00000005790xpo1a9852.072Xiphophorus_maculatus

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