EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00002152 (Gene tree)
Gene ID: -
Gene Symbol: iars-1
Alias: -
Full Name: Isoleucine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 4530 bases
Position: chrIV:10368607-10373136
Accession: Q21926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R11A8	Anticodon_1	PF08264.13	9.2e-23	1	1
R11A8	Anticodon_1	PF08264.13	9.2e-23	1	1
R11A8	tRNA-synt_1	PF00133.22	1.5e-222	1	1
R11A8	tRNA-synt_1	PF00133.22	1.5e-222	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R11A8.6.1	-	3804	NM_069513	R11A8.6.1	1141 (aa)	NP_501914	Q21926
R11A8.6.2	-	3597	NM_069513	R11A8.6.2	1141 (aa)	NP_501914	Q21926

Gene Model

Click here to download WBGene00002152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00002152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00002152	iars-1	99	56.083	ENSG00000196305	IARS	99	62.918	Homo_sapiens
WBGene00002152	iars-1	94	59.467	ENSAPOG00000002559	iars	82	61.213	Acanthochromis_polyacanthus
WBGene00002152	iars-1	99	55.852	ENSAMEG00000013415	IARS	82	59.904	Ailuropoda_melanoleuca
WBGene00002152	iars-1	99	53.793	ENSACIG00000018381	iars	91	53.793	Amphilophus_citrinellus
WBGene00002152	iars-1	94	59.651	ENSAPEG00000005602	iars	82	61.405	Amphiprion_percula
WBGene00002152	iars-1	93	60.206	ENSATEG00000024989	iars	84	60.112	Anabas_testudineus
WBGene00002152	iars-1	99	56.143	ENSAPLG00000005750	IARS	91	56.058	Anas_platyrhynchos
WBGene00002152	iars-1	93	59.311	ENSACAG00000009212	IARS	85	59.311	Anolis_carolinensis
WBGene00002152	iars-1	94	58.264	ENSANAG00000035740	IARS	90	58.079	Aotus_nancymaae
WBGene00002152	iars-1	99	57.291	ENSACLG00000017656	iars	91	56.578	Astatotilapia_calliptera
WBGene00002152	iars-1	92	60.319	ENSAMXG00000036265	iars	82	61.442	Astyanax_mexicanus
WBGene00002152	iars-1	93	58.665	ENSBTAG00000000974	IARS	82	59.789	Bos_taurus
WBGene00002152	iars-1	94	57.948	ENSCJAG00000020465	IARS	85	57.948	Callithrix_jacchus
WBGene00002152	iars-1	99	55.060	ENSCAFG00000002340	IARS	82	59.252	Canis_familiaris
WBGene00002152	iars-1	99	55.060	ENSCAFG00020009677	IARS	96	68.516	Canis_lupus_dingo
WBGene00002152	iars-1	93	59.036	ENSCHIG00000023719	IARS	82	60.269	Capra_hircus
WBGene00002152	iars-1	93	59.159	ENSTSYG00000001294	IARS	84	58.972	Carlito_syrichta
WBGene00002152	iars-1	94	53.605	ENSCAPG00000008012	IARS	83	53.605	Cavia_aperea
WBGene00002152	iars-1	99	55.450	ENSCPOG00000000819	IARS	91	55.450	Cavia_porcellus
WBGene00002152	iars-1	94	57.856	ENSCCAG00000022901	IARS	90	57.763	Cebus_capucinus
WBGene00002152	iars-1	99	56.342	ENSCATG00000044530	IARS	87	57.112	Cercocebus_atys
WBGene00002152	iars-1	81	76.596	ENSCLAG00000003319	IARS	77	76.596	Chinchilla_lanigera
WBGene00002152	iars-1	99	56.255	ENSCSAG00000007241	IARS	85	58.665	Chlorocebus_sabaeus
WBGene00002152	iars-1	80	63.889	ENSCHOG00000007264	IARS	74	63.889	Choloepus_hoffmanni
WBGene00002152	iars-1	94	62.614	ENSCPBG00000001174	IARS	93	62.614	Chrysemys_picta_bellii
WBGene00002152	iars-1	86	60.362	ENSCING00000002466	-	99	60.362	Ciona_intestinalis
WBGene00002152	iars-1	87	68.750	ENSCSAVG00000008078	-	94	68.750	Ciona_savignyi
WBGene00002152	iars-1	93	58.879	ENSCGRG00001023981	Iars	85	57.939	Cricetulus_griseus_chok1gshd
WBGene00002152	iars-1	93	58.879	ENSCGRG00000007869	Iars	84	58.879	Cricetulus_griseus_crigri
WBGene00002152	iars-1	99	57.808	ENSCSEG00000010191	iars	89	57.759	Cynoglossus_semilaevis
WBGene00002152	iars-1	93	59.588	ENSDARG00000007955	iars	91	56.362	Danio_rerio
WBGene00002152	iars-1	93	56.984	ENSDNOG00000019773	IARS	83	57.990	Dasypus_novemcinctus
WBGene00002152	iars-1	94	58.704	ENSDORG00000004383	Iars	85	58.774	Dipodomys_ordii
WBGene00002152	iars-1	92	56.441	FBgn0027086	IleRS	85	57.265	Drosophila_melanogaster
WBGene00002152	iars-1	61	68.387	ENSETEG00000004138	-	56	68.387	Echinops_telfairi
WBGene00002152	iars-1	91	54.450	ENSEBUG00000016686	iars	89	55.049	Eptatretus_burgeri
WBGene00002152	iars-1	85	65.462	ENSEASG00005009580	IARS	93	65.070	Equus_asinus_asinus
WBGene00002152	iars-1	76	70.755	ENSEEUG00000012427	IARS	67	70.755	Erinaceus_europaeus
WBGene00002152	iars-1	95	55.100	ENSELUG00000015636	iars	86	55.100	Esox_lucius
WBGene00002152	iars-1	93	58.824	ENSFCAG00000000817	IARS	82	59.827	Felis_catus
WBGene00002152	iars-1	99	56.072	ENSFALG00000010261	IARS	90	55.986	Ficedula_albicollis
WBGene00002152	iars-1	99	55.336	ENSFDAG00000010686	IARS	91	55.336	Fukomys_damarensis
WBGene00002152	iars-1	99	57.291	ENSFHEG00000015399	iars	91	57.291	Fundulus_heteroclitus
WBGene00002152	iars-1	99	57.007	ENSGMOG00000003632	iars	91	56.920	Gadus_morhua
WBGene00002152	iars-1	99	56.068	ENSGALG00000004813	IARS	93	55.983	Gallus_gallus
WBGene00002152	iars-1	92	60.413	ENSGAFG00000012832	iars	82	61.405	Gambusia_affinis
WBGene00002152	iars-1	92	60.038	ENSGACG00000007055	iars	99	61.508	Gasterosteus_aculeatus
WBGene00002152	iars-1	99	56.261	ENSGAGG00000017539	IARS	93	56.213	Gopherus_agassizii
WBGene00002152	iars-1	99	55.824	ENSGGOG00000010212	IARS	91	55.738	Gorilla_gorilla
WBGene00002152	iars-1	99	57.118	ENSHBUG00000010503	iars	89	57.118	Haplochromis_burtoni
WBGene00002152	iars-1	99	55.259	ENSHGLG00000011793	IARS	91	55.315	Heterocephalus_glaber_female
WBGene00002152	iars-1	98	55.507	ENSHGLG00100019375	-	90	55.420	Heterocephalus_glaber_male
WBGene00002152	iars-1	75	53.349	ENSHGLG00100010624	-	88	52.814	Heterocephalus_glaber_male
WBGene00002152	iars-1	92	59.756	ENSHCOG00000017482	iars	82	60.731	Hippocampus_comes
WBGene00002152	iars-1	99	56.093	ENSIPUG00000012333	iars	94	56.007	Ictalurus_punctatus
WBGene00002152	iars-1	94	59.335	ENSSTOG00000015173	IARS	85	59.242	Ictidomys_tridecemlineatus
WBGene00002152	iars-1	93	58.993	ENSJJAG00000012564	Iars	82	59.981	Jaculus_jaculus
WBGene00002152	iars-1	95	59.853	ENSKMAG00000011154	iars	85	59.853	Kryptolebias_marmoratus
WBGene00002152	iars-1	92	60.694	ENSLBEG00000016283	iars	84	60.694	Labrus_bergylta
WBGene00002152	iars-1	92	60.056	ENSLACG00000018913	IARS	82	60.978	Latimeria_chalumnae
WBGene00002152	iars-1	93	59.588	ENSLOCG00000013871	iars	82	60.499	Lepisosteus_oculatus
WBGene00002152	iars-1	94	58.226	ENSLAFG00000012996	IARS	85	58.202	Loxodonta_africana
WBGene00002152	iars-1	99	56.255	ENSMFAG00000033748	IARS	87	57.112	Macaca_fascicularis
WBGene00002152	iars-1	90	55.333	ENSMMUG00000004628	IARS	84	57.760	Macaca_mulatta
WBGene00002152	iars-1	99	56.169	ENSMNEG00000018792	IARS	91	56.228	Macaca_nemestrina
WBGene00002152	iars-1	90	59.540	ENSMLEG00000035022	IARS	83	59.615	Mandrillus_leucophaeus
WBGene00002152	iars-1	99	57.560	ENSMAMG00000014297	iars	92	57.560	Mastacembelus_armatus
WBGene00002152	iars-1	99	57.291	ENSMZEG00005013533	iars	91	56.578	Maylandia_zebra
WBGene00002152	iars-1	99	55.612	ENSMGAG00000004555	IARS	90	55.527	Meleagris_gallopavo
WBGene00002152	iars-1	99	55.527	ENSMAUG00000018695	Iars	91	55.670	Mesocricetus_auratus
WBGene00002152	iars-1	93	59.065	ENSMICG00000014286	IARS	84	59.065	Microcebus_murinus
WBGene00002152	iars-1	99	55.852	ENSMOCG00000022610	Iars	91	55.852	Microtus_ochrogaster
WBGene00002152	iars-1	92	59.868	ENSMMOG00000010432	iars	84	59.868	Mola_mola
WBGene00002152	iars-1	99	54.678	ENSMODG00000020876	IARS	83	58.869	Monodelphis_domestica
WBGene00002152	iars-1	95	59.455	ENSMALG00000008778	iars	87	59.455	Monopterus_albus
WBGene00002152	iars-1	93	58.155	MGP_CAROLIEiJ_G0018510	Iars	96	64.773	Mus_caroli
WBGene00002152	iars-1	93	58.062	ENSMUSG00000037851	Iars	96	64.773	Mus_musculus
WBGene00002152	iars-1	93	58.062	MGP_PahariEiJ_G0019576	Iars	96	64.773	Mus_pahari
WBGene00002152	iars-1	93	57.968	MGP_SPRETEiJ_G0019390	Iars	96	64.773	Mus_spretus
WBGene00002152	iars-1	94	56.057	ENSMPUG00000004835	IARS	83	57.221	Mustela_putorius_furo
WBGene00002152	iars-1	94	57.685	ENSMLUG00000015180	IARS	82	58.677	Myotis_lucifugus
WBGene00002152	iars-1	99	56.946	ENSNBRG00000022044	iars	91	56.946	Neolamprologus_brichardi
WBGene00002152	iars-1	93	58.295	ENSNLEG00000016253	IARS	86	57.382	Nomascus_leucogenys
WBGene00002152	iars-1	99	51.674	ENSMEUG00000011662	IARS	82	55.738	Notamacropus_eugenii
WBGene00002152	iars-1	62	61.905	ENSOPRG00000009618	-	58	61.905	Ochotona_princeps
WBGene00002152	iars-1	72	48.372	ENSODEG00000008400	-	98	47.782	Octodon_degus
WBGene00002152	iars-1	94	58.256	ENSODEG00000004404	-	82	59.366	Octodon_degus
WBGene00002152	iars-1	99	56.885	ENSONIG00000014366	iars	91	56.885	Oreochromis_niloticus
WBGene00002152	iars-1	77	57.318	ENSOANG00000000112	-	81	57.740	Ornithorhynchus_anatinus
WBGene00002152	iars-1	93	58.758	ENSOCUG00000016888	IARS	85	58.665	Oryctolagus_cuniculus
WBGene00002152	iars-1	99	56.373	ENSORLG00000004747	iars	91	56.191	Oryzias_latipes
WBGene00002152	iars-1	92	55.014	ENSORLG00020018714	iars	81	55.769	Oryzias_latipes_hni
WBGene00002152	iars-1	92	60.600	ENSORLG00015014606	iars	82	61.501	Oryzias_latipes_hsok
WBGene00002152	iars-1	92	60.507	ENSOMEG00000020072	iars	82	61.405	Oryzias_melastigma
WBGene00002152	iars-1	93	58.426	ENSOGAG00000015426	IARS	85	58.333	Otolemur_garnettii
WBGene00002152	iars-1	93	59.129	ENSOARG00000008328	IARS	82	60.269	Ovis_aries
WBGene00002152	iars-1	99	55.910	ENSPPAG00000027754	IARS	91	55.824	Pan_paniscus
WBGene00002152	iars-1	93	59.104	ENSPPRG00000008953	IARS	82	60.115	Panthera_pardus
WBGene00002152	iars-1	83	58.031	ENSPTIG00000015464	IARS	81	59.125	Panthera_tigris_altaica
WBGene00002152	iars-1	94	58.318	ENSPTRG00000021108	IARS	95	58.226	Pan_troglodytes
WBGene00002152	iars-1	99	54.333	ENSPANG00000024723	IARS	87	57.112	Papio_anubis
WBGene00002152	iars-1	92	60.056	ENSPKIG00000025011	iars	84	59.962	Paramormyrops_kingsleyae
WBGene00002152	iars-1	99	55.383	ENSPSIG00000011011	IARS	91	55.326	Pelodiscus_sinensis
WBGene00002152	iars-1	99	54.805	ENSPMGG00000005379	iars	96	54.805	Periophthalmus_magnuspinnatus
WBGene00002152	iars-1	99	55.613	ENSPEMG00000012867	Iars	91	55.756	Peromyscus_maniculatus_bairdii
WBGene00002152	iars-1	99	55.113	ENSPCIG00000023807	IARS	84	55.286	Phascolarctos_cinereus
WBGene00002152	iars-1	92	60.225	ENSPFOG00000011883	iars	82	61.213	Poecilia_formosa
WBGene00002152	iars-1	92	60.225	ENSPLAG00000012010	iars	82	61.213	Poecilia_latipinna
WBGene00002152	iars-1	92	60.225	ENSPMEG00000018215	iars	82	61.213	Poecilia_mexicana
WBGene00002152	iars-1	92	59.944	ENSPREG00000006938	iars	84	59.944	Poecilia_reticulata
WBGene00002152	iars-1	99	54.774	ENSPPYG00000019374	IARS	91	54.688	Pongo_abelii
WBGene00002152	iars-1	93	53.875	ENSPCAG00000013215	IARS	82	54.554	Procavia_capensis
WBGene00002152	iars-1	93	59.346	ENSPCOG00000017998	IARS	84	59.252	Propithecus_coquereli
WBGene00002152	iars-1	84	60.744	ENSPVAG00000010269	IARS	76	60.744	Pteropus_vampyrus
WBGene00002152	iars-1	99	57.118	ENSPNYG00000019391	iars	91	57.032	Pundamilia_nyererei
WBGene00002152	iars-1	92	57.103	ENSPNAG00000008441	iars	83	58.046	Pygocentrus_nattereri
WBGene00002152	iars-1	99	55.832	ENSRNOG00000014616	Iars	92	55.698	Rattus_norvegicus
WBGene00002152	iars-1	65	66.218	ENSRBIG00000038873	IARS	96	66.218	Rhinopithecus_bieti
WBGene00002152	iars-1	99	56.342	ENSRROG00000028942	IARS	91	56.488	Rhinopithecus_roxellana
WBGene00002152	iars-1	87	53.571	YBL076C	ILS1	94	53.571	Saccharomyces_cerevisiae
WBGene00002152	iars-1	94	55.125	ENSSBOG00000001596	IARS	85	54.940	Saimiri_boliviensis_boliviensis
WBGene00002152	iars-1	96	55.209	ENSSHAG00000000237	IARS	82	59.344	Sarcophilus_harrisii
WBGene00002152	iars-1	99	57.168	ENSSFOG00015001874	iars	82	60.308	Scleropages_formosus
WBGene00002152	iars-1	92	60.225	ENSSMAG00000013630	iars	84	60.131	Scophthalmus_maximus
WBGene00002152	iars-1	92	60.694	ENSSDUG00000016007	iars	84	60.694	Seriola_dumerili
WBGene00002152	iars-1	92	60.413	ENSSLDG00000003987	iars	84	59.868	Seriola_lalandi_dorsalis
WBGene00002152	iars-1	93	57.461	ENSSARG00000010543	IARS	82	58.445	Sorex_araneus
WBGene00002152	iars-1	99	55.412	ENSSPUG00000002467	IARS	91	55.412	Sphenodon_punctatus
WBGene00002152	iars-1	90	61.020	ENSSPAG00000020176	iars	82	61.020	Stegastes_partitus
WBGene00002152	iars-1	93	58.543	ENSSSCG00000008068	IARS	99	67.404	Sus_scrofa
WBGene00002152	iars-1	99	55.403	ENSTGUG00000004410	IARS	91	55.317	Taeniopygia_guttata
WBGene00002152	iars-1	92	60.600	ENSTRUG00000007056	iars	84	60.507	Takifugu_rubripes
WBGene00002152	iars-1	92	60.131	ENSTNIG00000014814	iars	83	60.131	Tetraodon_nigroviridis
WBGene00002152	iars-1	75	68.702	ENSTBEG00000014010	IARS	70	68.702	Tupaia_belangeri
WBGene00002152	iars-1	93	57.090	ENSTTRG00000008240	IARS	82	58.253	Tursiops_truncatus
WBGene00002152	iars-1	94	58.109	ENSUAMG00000013778	IARS	82	59.577	Ursus_americanus
WBGene00002152	iars-1	94	58.241	ENSUMAG00000015456	IARS	90	59.540	Ursus_maritimus
WBGene00002152	iars-1	93	55.236	ENSVPAG00000008524	IARS	82	56.142	Vicugna_pacos
WBGene00002152	iars-1	99	55.193	ENSVVUG00000004144	IARS	83	58.671	Vulpes_vulpes
WBGene00002152	iars-1	99	52.700	ENSXETG00000020903	iars	89	52.700	Xenopus_tropicalis
WBGene00002152	iars-1	92	60.338	ENSXMAG00000017562	iars	80	60.665	Xiphophorus_maculatus