EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00002238 (Gene tree)
Gene ID
-
Gene Symbol
kars-1
Alias
-
Full Name
Lysine--tRNA ligase
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
putative
Strand
Minus strand
Length
2233 bases
Position
chrII:7070183-7072415
Accession
Q22099
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
T02G5tRNA_anti-codonPF01336.259.9e-1311
T02G5tRNA_anti-codonPF01336.259.9e-1311
T02G5tRNA_anti-codonPF01336.251.2e-1211
T02G5tRNA_anti-codonPF01336.251.2e-1211
T02G5tRNA-synt_2dPF01409.202.2e-0811
T02G5tRNA-synt_2dPF01409.202.2e-0811
T02G5tRNA-synt_2dPF01409.203e-0811
T02G5tRNA-synt_2PF00152.204.3e-7811
T02G5tRNA-synt_2PF00152.204.3e-7811
T02G5tRNA-synt_2PF00152.204.7e-7811
T02G5tRNA-synt_2PF00152.205.3e-7811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
T02G5.9b-2070NM_001027133T02G5.9b596 (aa)NP_001022304Q95ZQ3
T02G5.9a-1953NM_001027133T02G5.9a572 (aa)NP_001022304Q22099
T02G5.9c.2-1961NM_001027133T02G5.9c.2514 (aa)NP_001022304Q2XN16
T02G5.9c.1-2134NM_001027133T02G5.9c.1514 (aa)NP_001022304Q2XN16
Gene Model
Click here to download WBGene00002238's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00002238's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00002238kars-19864.016ENSG00000065427KARS10056.863Homo_sapiens
WBGene00002238kars-19762.525ENSAPOG00000010997kars9758.951Acanthochromis_polyacanthus
WBGene00002238kars-19962.475ENSAMEG00000005347KARS9058.834Ailuropoda_melanoleuca
WBGene00002238kars-19760.400ENSACIG00000000304kars9658.018Amphilophus_citrinellus
WBGene00002238kars-19762.800ENSAOCG00000012971kars9658.590Amphiprion_ocellaris
WBGene00002238kars-19763.000ENSAPEG00000011144kars9659.537Amphiprion_percula
WBGene00002238kars-19763.327ENSATEG00000004954kars9758.855Anabas_testudineus
WBGene00002238kars-19361.538ENSAPLG00000012705KARS9956.545Anas_platyrhynchos
WBGene00002238kars-19863.780ENSACAG00000007577KARS8961.023Anolis_carolinensis
WBGene00002238kars-19755.644ENSANAG00000031739-9750.853Aotus_nancymaae
WBGene00002238kars-19963.035ENSANAG00000030403-9659.689Aotus_nancymaae
WBGene00002238kars-19764.000ENSACLG00000001613kars9460.901Astatotilapia_calliptera
WBGene00002238kars-19765.600ENSAMXG00000030719kars9662.057Astyanax_mexicanus
WBGene00002238kars-110063.107ENSBTAG00000015677KARS7459.965Bos_taurus
WBGene00002238kars-19863.618ENSCJAG00000014213KARS9560.141Callithrix_jacchus
WBGene00002238kars-19963.230ENSCAFG00000020069KARS9159.370Canis_familiaris
WBGene00002238kars-19963.230ENSCAFG00020001721KARS9660.035Canis_lupus_dingo
WBGene00002238kars-110063.107ENSCHIG00000014108-9759.965Capra_hircus
WBGene00002238kars-110061.359ENSCHIG00000016073-9558.319Capra_hircus
WBGene00002238kars-19962.868ENSTSYG00000001643KARS9759.325Carlito_syrichta
WBGene00002238kars-19957.760ENSCAPG00000016234KARS9554.417Cavia_aperea
WBGene00002238kars-19962.868ENSCPOG00000012036KARS9659.615Cavia_porcellus
WBGene00002238kars-19253.602ENSCCAG00000030337-9850.649Cebus_capucinus
WBGene00002238kars-19962.840ENSCCAG00000034307-9659.689Cebus_capucinus
WBGene00002238kars-19963.372ENSCATG00000038129KARS9560.179Cercocebus_atys
WBGene00002238kars-19963.137ENSCLAG00000007905KARS9659.930Chinchilla_lanigera
WBGene00002238kars-19863.618ENSCSAG00000003664KARS8960.000Chlorocebus_sabaeus
WBGene00002238kars-18866.519ENSCHOG00000013447KARS7266.519Choloepus_hoffmanni
WBGene00002238kars-19863.492ENSCPBG00000026969KARS9560.213Chrysemys_picta_bellii
WBGene00002238kars-19761.647ENSCPBG00000002553-9161.508Chrysemys_picta_bellii
WBGene00002238kars-19962.573ENSCING00000009513-9960.279Ciona_intestinalis
WBGene00002238kars-16365.549ENSCSAVG00000001136-10065.549Ciona_savignyi
WBGene00002238kars-19862.846ENSCSAVG00000007684-9859.894Ciona_savignyi
WBGene00002238kars-19860.437ENSCANG00000032813KARS9556.966Colobus_angolensis_palliatus
WBGene00002238kars-19864.414ENSCGRG00001004055KARS9560.739Cricetulus_griseus_chok1gshd
WBGene00002238kars-19864.414ENSCGRG00000014242KARS9560.739Cricetulus_griseus_crigri
WBGene00002238kars-19961.840ENSCSEG00000008324kars9858.947Cynoglossus_semilaevis
WBGene00002238kars-19763.400ENSCVAG00000019686kars9760.394Cyprinodon_variegatus
WBGene00002238kars-19763.800ENSDARG00000103799kars9763.800Danio_rerio
WBGene00002238kars-110062.136ENSDNOG00000002241KARS9158.392Dasypus_novemcinctus
WBGene00002238kars-19863.419ENSDORG00000004780-9560.141Dipodomys_ordii
WBGene00002238kars-19450.617ENSDORG00000024214-9448.634Dipodomys_ordii
WBGene00002238kars-19863.583FBgn0027084LysRS9960.279Drosophila_melanogaster
WBGene00002238kars-19862.425ENSETEG00000008353KARS8958.676Echinops_telfairi
WBGene00002238kars-19862.451ENSEBUG00000001284-9659.220Eptatretus_burgeri
WBGene00002238kars-19863.168ENSEASG00005013497KARS9560.141Equus_asinus_asinus
WBGene00002238kars-19863.168ENSECAG00000013424KARS9560.141Equus_caballus
WBGene00002238kars-19856.859ENSEEUG00000007042KARS9152.715Erinaceus_europaeus
WBGene00002238kars-19756.400ENSELUG00000014575kars9454.069Esox_lucius
WBGene00002238kars-19863.419ENSFCAG00000008573KARS9759.067Felis_catus
WBGene00002238kars-19862.722ENSFALG00000002543KARS9659.155Ficedula_albicollis
WBGene00002238kars-19963.261ENSFDAG00000007155KARS9660.209Fukomys_damarensis
WBGene00002238kars-19764.000ENSFHEG00000006172kars9661.470Fundulus_heteroclitus
WBGene00002238kars-19763.022ENSGMOG00000002633kars9258.657Gadus_morhua
WBGene00002238kars-19763.200ENSGALG00000000907KARS9759.132Gallus_gallus
WBGene00002238kars-19763.600ENSGAFG00000017252kars9761.111Gambusia_affinis
WBGene00002238kars-19860.784ENSGACG00000015749kars9557.848Gasterosteus_aculeatus
WBGene00002238kars-19762.048ENSGAGG00000011960-9561.660Gopherus_agassizii
WBGene00002238kars-19863.294ENSGAGG00000023836KARS9560.036Gopherus_agassizii
WBGene00002238kars-19864.016ENSGGOG00000005515KARS9560.847Gorilla_gorilla
WBGene00002238kars-19764.000ENSHBUG00000013619kars9460.901Haplochromis_burtoni
WBGene00002238kars-19950.877ENSHGLG00000001298-9648.873Heterocephalus_glaber_female
WBGene00002238kars-19962.672ENSHGLG00000011898KARS9858.761Heterocephalus_glaber_female
WBGene00002238kars-19952.604ENSHGLG00000015235-9652.604Heterocephalus_glaber_female
WBGene00002238kars-19950.682ENSHGLG00100006466-9648.700Heterocephalus_glaber_male
WBGene00002238kars-19962.672ENSHGLG00100012264KARS9658.988Heterocephalus_glaber_male
WBGene00002238kars-19458.058ENSHGLG00100012523-9157.938Heterocephalus_glaber_male
WBGene00002238kars-19764.000ENSHCOG00000002900kars9361.141Hippocampus_comes
WBGene00002238kars-19763.600ENSIPUG00000009862kars9661.622Ictalurus_punctatus
WBGene00002238kars-19963.261ENSSTOG00000004205KARS9659.511Ictidomys_tridecemlineatus
WBGene00002238kars-19864.215ENSJJAG00000020406Kars9661.199Jaculus_jaculus
WBGene00002238kars-19762.800ENSKMAG00000006434kars9659.220Kryptolebias_marmoratus
WBGene00002238kars-19763.400ENSLBEG00000026537kars9259.752Labrus_bergylta
WBGene00002238kars-19863.762ENSLACG00000006667KARS9260.457Latimeria_chalumnae
WBGene00002238kars-19863.690ENSLACG00000016399-9963.458Latimeria_chalumnae
WBGene00002238kars-19763.000ENSLOCG00000004002kars9759.325Lepisosteus_oculatus
WBGene00002238kars-19862.028ENSLOCG00000013608-9460.735Lepisosteus_oculatus
WBGene00002238kars-19962.768ENSLAFG00000015340KARS9158.947Loxodonta_africana
WBGene00002238kars-19863.618ENSMFAG00000040024KARS9560.141Macaca_fascicularis
WBGene00002238kars-18460.739ENSMNEG00000035832-9556.740Macaca_nemestrina
WBGene00002238kars-19863.618ENSMNEG00000042879-9560.141Macaca_nemestrina
WBGene00002238kars-19864.016ENSMLEG00000034947KARS9560.317Mandrillus_leucophaeus
WBGene00002238kars-19763.200ENSMAMG00000021559kars9158.781Mastacembelus_armatus
WBGene00002238kars-19764.000ENSMZEG00005014382kars9460.901Maylandia_zebra
WBGene00002238kars-19760.672ENSMGAG00000009000KARS9857.790Meleagris_gallopavo
WBGene00002238kars-19962.183ENSMICG00000011997KARS9659.201Microcebus_murinus
WBGene00002238kars-19663.563ENSMOCG00000019029-9559.541Microtus_ochrogaster
WBGene00002238kars-19864.016ENSMOCG00000011829Kars9560.777Microtus_ochrogaster
WBGene00002238kars-19763.200ENSMMOG00000016934kars9860.036Mola_mola
WBGene00002238kars-19863.636ENSMODG00000002215-9759.786Monodelphis_domestica
WBGene00002238kars-19961.840ENSMODG00000002238-8561.583Monodelphis_domestica
WBGene00002238kars-19763.200ENSMALG00000020858kars9759.786Monopterus_albus
WBGene00002238kars-17769.828MGP_CAROLIEiJ_G0031588Kars9369.828Mus_caroli
WBGene00002238kars-19963.743ENSMUSG00000031948Kars9760.832Mus_musculus
WBGene00002238kars-19963.992MGP_PahariEiJ_G0023186Kars9660.801Mus_pahari
WBGene00002238kars-19963.938MGP_SPRETEiJ_G0032706Kars9761.005Mus_spretus
WBGene00002238kars-19963.261ENSMPUG00000009871KARS9059.541Mustela_putorius_furo
WBGene00002238kars-17244.828ENSMLUG00000026871-7944.216Myotis_lucifugus
WBGene00002238kars-19863.241ENSMLUG00000015119-9559.649Myotis_lucifugus
WBGene00002238kars-19963.424ENSNGAG00000018820-9660.312Nannospalax_galili
WBGene00002238kars-19562.500ENSNGAG00000022944-9459.347Nannospalax_galili
WBGene00002238kars-19764.000ENSNBRG00000011098kars9460.901Neolamprologus_brichardi
WBGene00002238kars-19863.817ENSNLEG00000013072KARS9560.317Nomascus_leucogenys
WBGene00002238kars-19961.252ENSMEUG00000008684KARS9258.214Notamacropus_eugenii
WBGene00002238kars-19962.183ENSOPRG00000012544KARS9358.596Ochotona_princeps
WBGene00002238kars-110062.524ENSODEG00000013099-9958.711Octodon_degus
WBGene00002238kars-19646.787ENSODEG00000009464-9644.928Octodon_degus
WBGene00002238kars-19764.400ENSONIG00000005937kars9661.261Oreochromis_niloticus
WBGene00002238kars-19764.200ENSOANG00000008179KARS9360.830Ornithorhynchus_anatinus
WBGene00002238kars-19858.449ENSOCUG00000015553KARS9455.556Oryctolagus_cuniculus
WBGene00002238kars-19763.200ENSORLG00000007627kars9656.649Oryzias_latipes
WBGene00002238kars-19763.000ENSORLG00020010056kars9656.348Oryzias_latipes_hni
WBGene00002238kars-19763.200ENSORLG00015008179kars9656.348Oryzias_latipes_hsok
WBGene00002238kars-19763.400ENSOMEG00000001710kars9758.750Oryzias_melastigma
WBGene00002238kars-19956.545ENSOGAG00000005903KARS9156.545Otolemur_garnettii
WBGene00002238kars-19162.156ENSOARG00000006928KARS9459.065Ovis_aries
WBGene00002238kars-19864.215ENSPPAG00000036192KARS9560.847Pan_paniscus
WBGene00002238kars-19863.618ENSPPRG00000003027KARS9659.337Panthera_pardus
WBGene00002238kars-19863.221ENSPTIG00000008011KARS9659.162Panthera_tigris_altaica
WBGene00002238kars-19864.414ENSPTRG00000008364KARS9560.847Pan_troglodytes
WBGene00002238kars-19864.016ENSPANG00000024106KARS8960.179Papio_anubis
WBGene00002238kars-19763.800ENSPKIG00000009896kars9759.649Paramormyrops_kingsleyae
WBGene00002238kars-19764.200ENSPSIG00000009294KARS9659.253Pelodiscus_sinensis
WBGene00002238kars-19761.523ENSPSIG00000003041-9361.067Pelodiscus_sinensis
WBGene00002238kars-19762.200ENSPMGG00000006117kars9858.770Periophthalmus_magnuspinnatus
WBGene00002238kars-110063.107ENSPEMG00000012277Kars9759.413Peromyscus_maniculatus_bairdii
WBGene00002238kars-19763.400ENSPMAG00000008360-9059.893Petromyzon_marinus
WBGene00002238kars-19864.016ENSPCIG00000010761-9560.354Phascolarctos_cinereus
WBGene00002238kars-19762.400ENSPCIG00000025469-9059.132Phascolarctos_cinereus
WBGene00002238kars-19763.200ENSPFOG00000013253kars9160.108Poecilia_formosa
WBGene00002238kars-19763.400ENSPLAG00000004189kars9760.536Poecilia_latipinna
WBGene00002238kars-19763.200ENSPMEG00000015698kars9760.357Poecilia_mexicana
WBGene00002238kars-19763.600ENSPREG00000023179kars9761.111Poecilia_reticulata
WBGene00002238kars-19863.419ENSPPYG00000007567KARS9158.596Pongo_abelii
WBGene00002238kars-19857.654ENSPCAG00000010790KARS9757.594Procavia_capensis
WBGene00002238kars-19164.255ENSPCOG00000003166KARS8764.255Propithecus_coquereli
WBGene00002238kars-19863.419ENSPVAG00000006746KARS9059.643Pteropus_vampyrus
WBGene00002238kars-19764.000ENSPNYG00000013095kars9460.901Pundamilia_nyererei
WBGene00002238kars-19764.400ENSPNAG00000013828kars9661.580Pygocentrus_nattereri
WBGene00002238kars-19963.158ENSRNOG00000019456Kars9159.545Rattus_norvegicus
WBGene00002238kars-19963.372ENSRBIG00000030118KARS9560.000Rhinopithecus_bieti
WBGene00002238kars-19864.016ENSRROG00000041418KARS9560.000Rhinopithecus_roxellana
WBGene00002238kars-19757.937YDR037WKRS19455.755Saccharomyces_cerevisiae
WBGene00002238kars-18734.244YNL073W-8134.244Saccharomyces_cerevisiae
WBGene00002238kars-19962.646ENSSBOG00000019255KARS9858.669Saimiri_boliviensis_boliviensis
WBGene00002238kars-19860.990ENSSHAG00000001359-9757.932Sarcophilus_harrisii
WBGene00002238kars-19955.118ENSSHAG00000009005-9354.633Sarcophilus_harrisii
WBGene00002238kars-19954.440ENSSHAG00000002050-9152.189Sarcophilus_harrisii
WBGene00002238kars-19765.400ENSSFOG00015014837kars9861.664Scleropages_formosus
WBGene00002238kars-19762.600ENSSMAG00000021441kars9659.425Scophthalmus_maximus
WBGene00002238kars-19762.600ENSSDUG00000001202kars9659.220Seriola_dumerili
WBGene00002238kars-19762.800ENSSLDG00000021220kars9758.627Seriola_lalandi_dorsalis
WBGene00002238kars-17870.940ENSSARG00000011493KARS7870.940Sorex_araneus
WBGene00002238kars-19863.294ENSSPUG00000004974KARS9559.859Sphenodon_punctatus
WBGene00002238kars-16659.882ENSSPUG00000000449-8059.538Sphenodon_punctatus
WBGene00002238kars-19962.695ENSSPAG00000020365kars9858.549Stegastes_partitus
WBGene00002238kars-110063.107ENSSSCG00000002704KARS9759.585Sus_scrofa
WBGene00002238kars-19763.673ENSTGUG00000008400KARS9959.820Taeniopygia_guttata
WBGene00002238kars-19763.727ENSTRUG00000017551kars9160.550Takifugu_rubripes
WBGene00002238kars-19762.926ENSTNIG00000009351kars9559.743Tetraodon_nigroviridis
WBGene00002238kars-19053.362ENSTBEG00000004610KARS8053.362Tupaia_belangeri
WBGene00002238kars-110062.136ENSTTRG00000001221KARS9158.494Tursiops_truncatus
WBGene00002238kars-19962.279ENSUAMG00000017557KARS9658.813Ursus_americanus
WBGene00002238kars-19962.279ENSUMAG00000014559KARS9058.657Ursus_maritimus
WBGene00002238kars-110060.777ENSVPAG00000003716KARS9157.168Vicugna_pacos
WBGene00002238kars-19963.230ENSVVUG00000024338KARS9859.821Vulpes_vulpes
WBGene00002238kars-19763.000ENSXETG00000003569kars9560.217Xenopus_tropicalis
WBGene00002238kars-19763.400ENSXCOG00000011313kars9759.963Xiphophorus_couchianus
WBGene00002238kars-19763.600ENSXMAG00000003191kars9760.498Xiphophorus_maculatus

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