EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00002335 (Gene tree)
Gene ID: -
Gene Symbol: let-60
Alias: lin-34
Full Name: Ras protein let-60
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 2862 bases
Position: chrIV:11688227-11691088
Accession: P22981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK792	GTP_EFTU	PF00009.27	4.7e-07	1	1
ZK792	MMR_HSR1	PF01926.23	3.9e-05	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK792.6	-	1385	-	ZK792.6	184 (aa)	NP_502213	P22981

Gene Model

Click here to download WBGene00002335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00002335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00002335	let-60	85	49.045	WBGene00004309	rap-3	76	49.045
WBGene00002335	let-60	97	33.673	WBGene00004279	rab-21	87	32.787
WBGene00002335	let-60	88	36.310	WBGene00004274	rab-11.1	72	34.615
WBGene00002335	let-60	88	32.335	WBGene00004275	rab-11.2	75	30.968
WBGene00002335	let-60	95	30.682	WBGene00004277	rab-18	87	30.682
WBGene00002335	let-60	85	31.013	WBGene00004270	rab-6.2	77	31.013
WBGene00002335	let-60	93	33.146	WBGene00004271	rab-7	80	31.737
WBGene00002335	let-60	90	37.500	WBGene00006833	unc-108	72	36.538
WBGene00002335	let-60	83	35.484	WBGene00004284	rab-35	73	35.484
WBGene00002335	let-60	88	32.143	WBGene00004286	rab-39	73	32.143
WBGene00002335	let-60	82	31.646	WBGene00022177	Y71H2AM.12	74	31.126
WBGene00002335	let-60	97	36.458	WBGene00010038	rheb-1	87	35.912
WBGene00002335	let-60	88	36.196	WBGene00004266	rab-1	79	36.196

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00002335	let-60	98	76.796	ENSG00000174775	HRAS	96	76.796	Homo_sapiens
WBGene00002335	let-60	98	77.901	ENSAPOG00000023684	hrasb	96	77.901	Acanthochromis_polyacanthus
WBGene00002335	let-60	92	81.065	ENSAMEG00000010515	HRAS	72	76.243	Ailuropoda_melanoleuca
WBGene00002335	let-60	98	77.901	ENSACIG00000000699	hrasb	96	77.901	Amphilophus_citrinellus
WBGene00002335	let-60	98	77.901	ENSAOCG00000011843	hrasb	96	77.901	Amphiprion_ocellaris
WBGene00002335	let-60	98	77.901	ENSAPEG00000009546	hrasb	96	77.901	Amphiprion_percula
WBGene00002335	let-60	98	77.901	ENSATEG00000020001	hrasb	96	77.901	Anabas_testudineus
WBGene00002335	let-60	89	82.317	ENSAPLG00000012248	HRAS	100	82.317	Anas_platyrhynchos
WBGene00002335	let-60	98	77.348	ENSACAG00000014920	HRAS	96	77.348	Anolis_carolinensis
WBGene00002335	let-60	98	76.796	ENSANAG00000034201	HRAS	96	76.796	Aotus_nancymaae
WBGene00002335	let-60	98	77.901	ENSACLG00000001181	hrasb	96	77.901	Astatotilapia_calliptera
WBGene00002335	let-60	98	77.901	ENSAMXG00000035885	hrasa	96	77.901	Astyanax_mexicanus
WBGene00002335	let-60	98	77.901	ENSAMXG00000033907	hrasb	96	77.901	Astyanax_mexicanus
WBGene00002335	let-60	92	81.065	ENSBTAG00000046644	HRAS	96	76.243	Bos_taurus
WBGene00002335	let-60	98	76.796	ENSCJAG00000012199	HRAS	96	76.796	Callithrix_jacchus
WBGene00002335	let-60	81	82.550	ENSCAFG00000031029	HRAS	60	82.550	Canis_familiaris
WBGene00002335	let-60	91	81.437	ENSCAFG00020007059	HRAS	89	82.119	Canis_lupus_dingo
WBGene00002335	let-60	92	81.065	ENSCHIG00000004808	HRAS	89	82.119	Capra_hircus
WBGene00002335	let-60	98	76.796	ENSTSYG00000003745	HRAS	96	76.796	Carlito_syrichta
WBGene00002335	let-60	98	76.796	ENSCAPG00000000745	HRAS	96	76.796	Cavia_aperea
WBGene00002335	let-60	98	76.796	ENSCPOG00000000101	HRAS	96	76.796	Cavia_porcellus
WBGene00002335	let-60	98	76.796	ENSCCAG00000031453	HRAS	96	76.796	Cebus_capucinus
WBGene00002335	let-60	98	76.796	ENSCATG00000031194	HRAS	96	76.796	Cercocebus_atys
WBGene00002335	let-60	98	76.243	ENSCLAG00000002823	HRAS	96	76.243	Chinchilla_lanigera
WBGene00002335	let-60	98	76.796	ENSCSAG00000011033	HRAS	96	76.796	Chlorocebus_sabaeus
WBGene00002335	let-60	98	76.796	ENSCPBG00000013941	-	96	76.796	Chrysemys_picta_bellii
WBGene00002335	let-60	98	76.796	ENSCANG00000017827	HRAS	96	76.796	Colobus_angolensis_palliatus
WBGene00002335	let-60	98	76.796	ENSCGRG00001018735	Hras	96	76.796	Cricetulus_griseus_chok1gshd
WBGene00002335	let-60	98	76.796	ENSCGRG00000010918	Hras	96	76.796	Cricetulus_griseus_crigri
WBGene00002335	let-60	98	77.901	ENSCSEG00000007927	hrasb	96	77.901	Cynoglossus_semilaevis
WBGene00002335	let-60	98	77.348	ENSCVAG00000008670	hrasb	96	77.348	Cyprinodon_variegatus
WBGene00002335	let-60	98	77.901	ENSDARG00000005651	hrasb	100	83.333	Danio_rerio
WBGene00002335	let-60	100	77.005	ENSDARG00000013161	zgc:55558	100	77.005	Danio_rerio
WBGene00002335	let-60	98	77.901	ENSDARG00000098497	hrasa	96	77.901	Danio_rerio
WBGene00002335	let-60	98	77.901	ENSDNOG00000015293	HRAS	96	77.901	Dasypus_novemcinctus
WBGene00002335	let-60	98	76.796	ENSDORG00000028079	Hras	96	76.796	Dipodomys_ordii
WBGene00002335	let-60	100	76.190	FBgn0003205	Ras85D	100	76.190	Drosophila_melanogaster
WBGene00002335	let-60	98	76.243	ENSETEG00000019899	HRAS	96	76.243	Echinops_telfairi
WBGene00002335	let-60	99	75.956	ENSEBUG00000004670	hrasb	97	75.956	Eptatretus_burgeri
WBGene00002335	let-60	92	81.065	ENSECAG00000008473	HRAS	89	81.065	Equus_caballus
WBGene00002335	let-60	81	83.221	ENSEEUG00000014548	HRAS	86	83.221	Erinaceus_europaeus
WBGene00002335	let-60	98	77.901	ENSELUG00000004712	HRAS	96	77.901	Esox_lucius
WBGene00002335	let-60	92	81.065	ENSFCAG00000002990	HRAS	89	82.119	Felis_catus
WBGene00002335	let-60	98	76.796	ENSFALG00000012145	HRAS	96	76.796	Ficedula_albicollis
WBGene00002335	let-60	98	76.796	ENSFDAG00000006760	HRAS	96	76.796	Fukomys_damarensis
WBGene00002335	let-60	98	77.901	ENSFHEG00000010055	hrasb	96	77.901	Fundulus_heteroclitus
WBGene00002335	let-60	93	80.233	ENSGMOG00000010196	hrasb	92	80.233	Gadus_morhua
WBGene00002335	let-60	98	76.796	ENSGALG00000029260	H-RAS	96	76.796	Gallus_gallus
WBGene00002335	let-60	98	77.901	ENSGAFG00000021814	hrasb	96	77.901	Gambusia_affinis
WBGene00002335	let-60	98	77.901	ENSGACG00000011340	hrasb	96	77.901	Gasterosteus_aculeatus
WBGene00002335	let-60	98	76.796	ENSGAGG00000019886	-	96	76.796	Gopherus_agassizii
WBGene00002335	let-60	98	76.796	ENSGGOG00000015438	HRAS	96	76.796	Gorilla_gorilla
WBGene00002335	let-60	98	77.901	ENSHBUG00000011998	hrasb	96	77.901	Haplochromis_burtoni
WBGene00002335	let-60	98	76.243	ENSHGLG00000004508	HRAS	96	76.243	Heterocephalus_glaber_female
WBGene00002335	let-60	98	76.243	ENSHGLG00100012888	HRAS	96	76.243	Heterocephalus_glaber_male
WBGene00002335	let-60	98	77.901	ENSIPUG00000022502	hrasb	96	77.901	Ictalurus_punctatus
WBGene00002335	let-60	98	77.901	ENSIPUG00000006053	hras	96	77.901	Ictalurus_punctatus
WBGene00002335	let-60	98	76.796	ENSSTOG00000021206	HRAS	96	76.796	Ictidomys_tridecemlineatus
WBGene00002335	let-60	80	80.952	ENSJJAG00000011743	-	85	80.952	Jaculus_jaculus
WBGene00002335	let-60	92	81.065	ENSJJAG00000022529	-	89	81.065	Jaculus_jaculus
WBGene00002335	let-60	98	77.901	ENSKMAG00000001922	Ha-ras	96	77.901	Kryptolebias_marmoratus
WBGene00002335	let-60	98	77.901	ENSLBEG00000001905	hrasb	96	77.901	Labrus_bergylta
WBGene00002335	let-60	98	76.796	ENSLACG00000018427	HRAS	96	76.796	Latimeria_chalumnae
WBGene00002335	let-60	98	77.901	ENSLOCG00000000684	hrasb	96	77.901	Lepisosteus_oculatus
WBGene00002335	let-60	98	76.796	ENSMFAG00000039003	HRAS	96	76.796	Macaca_fascicularis
WBGene00002335	let-60	98	76.796	ENSMMUG00000021659	HRAS	96	76.796	Macaca_mulatta
WBGene00002335	let-60	98	76.796	ENSMNEG00000039358	HRAS	96	76.796	Macaca_nemestrina
WBGene00002335	let-60	98	76.796	ENSMLEG00000042070	HRAS	96	76.796	Mandrillus_leucophaeus
WBGene00002335	let-60	98	77.901	ENSMAMG00000004359	hrasb	96	77.901	Mastacembelus_armatus
WBGene00002335	let-60	98	77.901	ENSMZEG00005017583	hrasb	96	77.901	Maylandia_zebra
WBGene00002335	let-60	98	76.796	ENSMAUG00000020006	Hras	96	76.796	Mesocricetus_auratus
WBGene00002335	let-60	98	76.243	ENSMICG00000006472	HRAS	96	76.243	Microcebus_murinus
WBGene00002335	let-60	98	76.796	ENSMOCG00000000744	Hras	96	76.796	Microtus_ochrogaster
WBGene00002335	let-60	81	83.221	ENSMODG00000016580	HRAS	71	83.221	Monodelphis_domestica
WBGene00002335	let-60	98	77.901	ENSMALG00000011273	hrasb	96	77.901	Monopterus_albus
WBGene00002335	let-60	98	76.243	MGP_CAROLIEiJ_G0030681	Hras	96	76.243	Mus_caroli
WBGene00002335	let-60	98	76.796	ENSMUSG00000025499	Hras	96	76.796	Mus_musculus
WBGene00002335	let-60	98	76.796	MGP_PahariEiJ_G0013880	Hras	96	76.796	Mus_pahari
WBGene00002335	let-60	98	70.718	MGP_SPRETEiJ_G0031792	-	96	70.718	Mus_spretus
WBGene00002335	let-60	98	76.796	ENSNGAG00000022044	Hras	96	76.796	Nannospalax_galili
WBGene00002335	let-60	98	76.796	ENSNLEG00000008300	HRAS	96	76.796	Nomascus_leucogenys
WBGene00002335	let-60	98	76.243	ENSODEG00000015703	HRAS	96	76.243	Octodon_degus
WBGene00002335	let-60	98	77.901	ENSONIG00000014560	hrasb	96	77.901	Oreochromis_niloticus
WBGene00002335	let-60	100	77.419	ENSORLG00000024443	zgc:55558	100	77.419	Oryzias_latipes
WBGene00002335	let-60	98	77.348	ENSORLG00000018912	hrasb	96	77.348	Oryzias_latipes
WBGene00002335	let-60	98	77.348	ENSORLG00020008129	hras	96	77.348	Oryzias_latipes_hni
WBGene00002335	let-60	100	77.419	ENSORLG00020013690	zgc:55558	100	77.419	Oryzias_latipes_hni
WBGene00002335	let-60	100	77.419	ENSORLG00015003353	zgc:55558	100	77.419	Oryzias_latipes_hsok
WBGene00002335	let-60	92	81.657	ENSOMEG00000018719	hrasb	89	81.657	Oryzias_melastigma
WBGene00002335	let-60	100	75.806	ENSOMEG00000016685	zgc:55558	100	75.806	Oryzias_melastigma
WBGene00002335	let-60	93	79.070	ENSOGAG00000024846	HRAS	96	75.691	Otolemur_garnettii
WBGene00002335	let-60	81	82.550	ENSOARG00000007365	HRAS	99	82.550	Ovis_aries
WBGene00002335	let-60	98	76.796	ENSPPAG00000028620	HRAS	96	76.796	Pan_paniscus
WBGene00002335	let-60	81	82.550	ENSPPRG00000008185	HRAS	87	82.550	Panthera_pardus
WBGene00002335	let-60	70	87.500	ENSPTIG00000006043	HRAS	96	87.500	Panthera_tigris_altaica
WBGene00002335	let-60	98	76.796	ENSPTRG00000034469	HRAS	96	76.796	Pan_troglodytes
WBGene00002335	let-60	98	76.796	ENSPANG00000016633	-	96	76.796	Papio_anubis
WBGene00002335	let-60	98	76.796	ENSPANG00000008022	-	96	76.796	Papio_anubis
WBGene00002335	let-60	98	77.901	ENSPKIG00000000303	HRAS	96	77.901	Paramormyrops_kingsleyae
WBGene00002335	let-60	98	77.901	ENSPKIG00000013507	hrasb	96	77.901	Paramormyrops_kingsleyae
WBGene00002335	let-60	93	80.233	ENSPSIG00000014690	HRAS	95	76.796	Pelodiscus_sinensis
WBGene00002335	let-60	98	77.901	ENSPMGG00000005812	HRAS	89	77.049	Periophthalmus_magnuspinnatus
WBGene00002335	let-60	72	84.848	ENSPMGG00000014517	zgc:55558	93	84.848	Periophthalmus_magnuspinnatus
WBGene00002335	let-60	98	76.796	ENSPEMG00000013973	-	96	76.796	Peromyscus_maniculatus_bairdii
WBGene00002335	let-60	99	77.049	ENSPMAG00000004548	hrasb	95	77.049	Petromyzon_marinus
WBGene00002335	let-60	98	77.348	ENSPCIG00000008359	HRAS	96	77.348	Phascolarctos_cinereus
WBGene00002335	let-60	98	77.901	ENSPFOG00000002595	hrasb	96	77.901	Poecilia_formosa
WBGene00002335	let-60	98	77.348	ENSPLAG00000003379	hrasb	96	77.348	Poecilia_latipinna
WBGene00002335	let-60	98	77.901	ENSPMEG00000020891	hrasb	96	77.901	Poecilia_mexicana
WBGene00002335	let-60	98	77.901	ENSPREG00000019341	hrasb	96	77.901	Poecilia_reticulata
WBGene00002335	let-60	98	76.796	ENSPPYG00000002868	HRAS	96	76.796	Pongo_abelii
WBGene00002335	let-60	98	76.243	ENSPCOG00000021838	HRAS	96	76.243	Propithecus_coquereli
WBGene00002335	let-60	98	77.901	ENSPNYG00000015124	hrasb	96	77.901	Pundamilia_nyererei
WBGene00002335	let-60	98	77.901	ENSPNAG00000014085	hrasa	96	77.901	Pygocentrus_nattereri
WBGene00002335	let-60	98	77.901	ENSPNAG00000000584	hrasb	96	77.901	Pygocentrus_nattereri
WBGene00002335	let-60	98	76.796	ENSRNOG00000016611	Hras	96	76.796	Rattus_norvegicus
WBGene00002335	let-60	98	76.796	ENSRBIG00000034835	HRAS	96	76.796	Rhinopithecus_bieti
WBGene00002335	let-60	98	76.796	ENSRROG00000041325	HRAS	96	76.796	Rhinopithecus_roxellana
WBGene00002335	let-60	98	76.796	ENSSBOG00000023272	HRAS	96	76.796	Saimiri_boliviensis_boliviensis
WBGene00002335	let-60	88	56.173	ENSSHAG00000004318	-	80	56.173	Sarcophilus_harrisii
WBGene00002335	let-60	98	77.901	ENSSFOG00015003051	hrasb	96	77.901	Scleropages_formosus
WBGene00002335	let-60	98	77.901	ENSSFOG00015011157	-	96	77.901	Scleropages_formosus
WBGene00002335	let-60	98	77.901	ENSSMAG00000008745	hrasb	96	77.901	Scophthalmus_maximus
WBGene00002335	let-60	98	77.901	ENSSDUG00000019086	hrasb	96	77.901	Seriola_dumerili
WBGene00002335	let-60	98	77.901	ENSSLDG00000012627	hrasb	96	77.901	Seriola_lalandi_dorsalis
WBGene00002335	let-60	98	77.348	ENSSPUG00000005243	HRAS	96	77.348	Sphenodon_punctatus
WBGene00002335	let-60	98	77.901	ENSSPAG00000007357	hrasb	96	77.901	Stegastes_partitus
WBGene00002335	let-60	92	81.065	ENSSSCG00000031513	HRAS	89	81.065	Sus_scrofa
WBGene00002335	let-60	98	76.796	ENSTGUG00000009877	HRAS	96	76.796	Taeniopygia_guttata
WBGene00002335	let-60	98	77.348	ENSTRUG00000024825	hrasb	96	77.348	Takifugu_rubripes
WBGene00002335	let-60	98	77.348	ENSTNIG00000011385	hrasb	96	77.348	Tetraodon_nigroviridis
WBGene00002335	let-60	92	81.657	ENSTTRG00000011120	HRAS	89	81.657	Tursiops_truncatus
WBGene00002335	let-60	92	81.065	ENSUAMG00000027527	-	89	82.119	Ursus_americanus
WBGene00002335	let-60	92	81.065	ENSUMAG00000005506	-	89	82.119	Ursus_maritimus
WBGene00002335	let-60	92	81.065	ENSVVUG00000017151	HRAS	89	81.065	Vulpes_vulpes
WBGene00002335	let-60	98	77.348	ENSXETG00000006040	hras	96	77.348	Xenopus_tropicalis
WBGene00002335	let-60	98	79.444	ENSXCOG00000020608	hrasb	89	88.000	Xiphophorus_couchianus
WBGene00002335	let-60	98	77.901	ENSXMAG00000015132	hrasb	96	77.901	Xiphophorus_maculatus