EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00002845 (Gene tree)
Gene ID: -
Gene Symbol: let-711
Alias: ntl-1
Full Name: NTL-1a
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 12165 bases
Position: chrIII:6946718-6958882
Accession: Q20937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F57B9	Not1	PF04054.15	2.2e-127	1	1
F57B9	Not1	PF04054.15	3.1e-127	1	1
F57B9	Not1	PF04054.15	3.7e-127	1	1
F57B9	Not1	PF04054.15	3.8e-127	1	1
F57B9	Not1	PF04054.15	4.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F57B9.2c	-	8426	NM_001346615	F57B9.2c	2334 (aa)	NP_001333557	A0A1D3PCL8
F57B9.2b	-	8663	NM_001346614	F57B9.2b	2624 (aa)	NP_001333556	A0A1D3PCM5
F57B9.2a	-	8663	NM_001346614	F57B9.2a	2641 (aa)	NP_001333556	A0A1D3PCM5
F57B9.2e	-	1944	-	F57B9.2e	257 (aa)	NP_001333559	A0A1D3PCL9
F57B9.2d	-	6311	NM_001346616	F57B9.2d	1875 (aa)	NP_001333558	S5ZDJ9

Gene Model

Click here to download WBGene00002845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00002845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00002845	let-711	92	54.430	ENSG00000125107	CNOT1	96	64.615	Homo_sapiens
WBGene00002845	let-711	92	54.008	ENSAPOG00000005042	cnot1	76	44.202	Acanthochromis_polyacanthus
WBGene00002845	let-711	92	54.430	ENSAMEG00000017298	CNOT1	81	40.629	Ailuropoda_melanoleuca
WBGene00002845	let-711	92	54.008	ENSACIG00000016003	cnot1	86	41.065	Amphilophus_citrinellus
WBGene00002845	let-711	92	54.008	ENSAOCG00000002859	cnot1	99	40.367	Amphiprion_ocellaris
WBGene00002845	let-711	92	54.008	ENSAPEG00000022342	cnot1	79	41.331	Amphiprion_percula
WBGene00002845	let-711	92	54.008	ENSATEG00000012892	cnot1	79	44.202	Anabas_testudineus
WBGene00002845	let-711	92	54.430	ENSAPLG00000007162	CNOT1	82	40.000	Anas_platyrhynchos
WBGene00002845	let-711	73	39.770	ENSACAG00000001602	CNOT1	74	39.842	Anolis_carolinensis
WBGene00002845	let-711	92	49.367	ENSANAG00000038198	CNOT1	81	38.745	Aotus_nancymaae
WBGene00002845	let-711	92	54.008	ENSACLG00000014234	cnot1	76	44.202	Astatotilapia_calliptera
WBGene00002845	let-711	92	54.008	ENSAMXG00000013170	cnot1	78	41.528	Astyanax_mexicanus
WBGene00002845	let-711	92	54.430	ENSBTAG00000020782	CNOT1	80	53.770	Bos_taurus
WBGene00002845	let-711	92	54.430	ENSCJAG00000011318	CNOT1	98	49.545	Callithrix_jacchus
WBGene00002845	let-711	92	54.430	ENSCAFG00000008426	CNOT1	82	40.209	Canis_familiaris
WBGene00002845	let-711	79	55.665	ENSCAFG00020010156	CNOT1	79	54.255	Canis_lupus_dingo
WBGene00002845	let-711	92	54.430	ENSCHIG00000010452	CNOT1	81	40.440	Capra_hircus
WBGene00002845	let-711	92	54.430	ENSTSYG00000006888	CNOT1	81	40.440	Carlito_syrichta
WBGene00002845	let-711	76	42.857	ENSCAPG00000007848	-	99	31.585	Cavia_aperea
WBGene00002845	let-711	92	54.430	ENSCPOG00000013026	CNOT1	79	39.977	Cavia_porcellus
WBGene00002845	let-711	92	54.430	ENSCCAG00000026333	CNOT1	81	38.934	Cebus_capucinus
WBGene00002845	let-711	92	54.430	ENSCATG00000032625	CNOT1	81	40.440	Cercocebus_atys
WBGene00002845	let-711	92	54.430	ENSCLAG00000006289	CNOT1	81	40.440	Chinchilla_lanigera
WBGene00002845	let-711	92	54.430	ENSCSAG00000004731	CNOT1	81	40.440	Chlorocebus_sabaeus
WBGene00002845	let-711	92	54.430	ENSCHOG00000009712	CNOT1	55	67.241	Choloepus_hoffmanni
WBGene00002845	let-711	92	54.430	ENSCPBG00000026222	CNOT1	82	53.770	Chrysemys_picta_bellii
WBGene00002845	let-711	89	55.895	ENSCING00000009149	-	72	39.897	Ciona_intestinalis
WBGene00002845	let-711	93	54.202	ENSCSAVG00000002414	-	99	36.659	Ciona_savignyi
WBGene00002845	let-711	92	54.430	ENSCANG00000040534	CNOT1	82	40.277	Colobus_angolensis_palliatus
WBGene00002845	let-711	92	54.430	ENSCGRG00001016365	Cnot1	81	40.442	Cricetulus_griseus_chok1gshd
WBGene00002845	let-711	92	54.430	ENSCGRG00000001714	Cnot1	81	40.442	Cricetulus_griseus_crigri
WBGene00002845	let-711	92	54.008	ENSCSEG00000021493	cnot1	99	39.612	Cynoglossus_semilaevis
WBGene00002845	let-711	92	54.008	ENSCVAG00000018930	cnot1	79	44.338	Cyprinodon_variegatus
WBGene00002845	let-711	92	54.008	ENSDARG00000004174	cnot1	85	41.108	Danio_rerio
WBGene00002845	let-711	92	54.430	ENSDNOG00000013250	CNOT1	83	39.704	Dasypus_novemcinctus
WBGene00002845	let-711	92	54.430	ENSDORG00000002101	-	99	40.978	Dipodomys_ordii
WBGene00002845	let-711	87	55.804	FBgn0085436	Not1	85	36.883	Drosophila_melanogaster
WBGene00002845	let-711	92	53.165	ENSETEG00000012806	CNOT1	58	50.820	Echinops_telfairi
WBGene00002845	let-711	66	45.294	ENSEBUG00000011534	cnot1	67	46.717	Eptatretus_burgeri
WBGene00002845	let-711	92	54.430	ENSEASG00005005819	CNOT1	82	53.770	Equus_asinus_asinus
WBGene00002845	let-711	92	54.430	ENSECAG00000009889	CNOT1	90	40.440	Equus_caballus
WBGene00002845	let-711	92	54.430	ENSEEUG00000006015	CNOT1	63	44.950	Erinaceus_europaeus
WBGene00002845	let-711	92	54.008	ENSELUG00000014085	cnot1	79	40.640	Esox_lucius
WBGene00002845	let-711	92	54.430	ENSFCAG00000025155	CNOT1	83	40.440	Felis_catus
WBGene00002845	let-711	92	54.430	ENSFALG00000007285	CNOT1	82	39.966	Ficedula_albicollis
WBGene00002845	let-711	92	54.430	ENSFDAG00000013399	CNOT1	81	40.440	Fukomys_damarensis
WBGene00002845	let-711	92	54.008	ENSFHEG00000020574	cnot1	78	41.090	Fundulus_heteroclitus
WBGene00002845	let-711	73	39.485	ENSGMOG00000012864	cnot1	75	39.617	Gadus_morhua
WBGene00002845	let-711	92	54.430	ENSGALG00000002301	CNOT1	82	40.080	Gallus_gallus
WBGene00002845	let-711	91	55.365	ENSGAFG00000015005	cnot1	79	41.451	Gambusia_affinis
WBGene00002845	let-711	91	55.365	ENSGACG00000002606	cnot1	99	40.946	Gasterosteus_aculeatus
WBGene00002845	let-711	92	54.430	ENSGAGG00000022646	CNOT1	82	40.172	Gopherus_agassizii
WBGene00002845	let-711	92	54.430	ENSGGOG00000009547	CNOT1	81	40.440	Gorilla_gorilla
WBGene00002845	let-711	92	54.008	ENSHBUG00000001729	cnot1	76	44.202	Haplochromis_burtoni
WBGene00002845	let-711	92	54.430	ENSHGLG00000014322	CNOT1	81	40.382	Heterocephalus_glaber_female
WBGene00002845	let-711	92	53.586	ENSHCOG00000006501	cnot1	81	40.759	Hippocampus_comes
WBGene00002845	let-711	92	54.008	ENSIPUG00000011915	cnot1	79	41.754	Ictalurus_punctatus
WBGene00002845	let-711	92	54.430	ENSSTOG00000005490	CNOT1	81	40.442	Ictidomys_tridecemlineatus
WBGene00002845	let-711	92	54.008	ENSJJAG00000000633	Cnot1	81	40.115	Jaculus_jaculus
WBGene00002845	let-711	92	54.008	ENSKMAG00000006149	cnot1	78	41.263	Kryptolebias_marmoratus
WBGene00002845	let-711	92	54.008	ENSLBEG00000004740	cnot1	76	53.373	Labrus_bergylta
WBGene00002845	let-711	92	54.430	ENSLACG00000010869	CNOT1	82	40.777	Latimeria_chalumnae
WBGene00002845	let-711	92	54.008	ENSLOCG00000006324	cnot1	78	41.487	Lepisosteus_oculatus
WBGene00002845	let-711	92	54.430	ENSLAFG00000000098	CNOT1	81	40.394	Loxodonta_africana
WBGene00002845	let-711	92	54.430	ENSMFAG00000035888	CNOT1	82	40.277	Macaca_fascicularis
WBGene00002845	let-711	92	54.430	ENSMMUG00000014625	CNOT1	94	50.883	Macaca_mulatta
WBGene00002845	let-711	92	54.430	ENSMNEG00000031820	CNOT1	90	40.440	Macaca_nemestrina
WBGene00002845	let-711	92	54.430	ENSMLEG00000040933	CNOT1	81	39.455	Mandrillus_leucophaeus
WBGene00002845	let-711	92	54.008	ENSMAMG00000016524	cnot1	78	41.048	Mastacembelus_armatus
WBGene00002845	let-711	92	54.008	ENSMZEG00005016210	cnot1	77	44.202	Maylandia_zebra
WBGene00002845	let-711	92	54.430	ENSMGAG00000001908	CNOT1	82	40.265	Meleagris_gallopavo
WBGene00002845	let-711	92	54.430	ENSMAUG00000009731	-	99	41.176	Mesocricetus_auratus
WBGene00002845	let-711	92	54.430	ENSMICG00000007071	CNOT1	82	40.289	Microcebus_murinus
WBGene00002845	let-711	92	54.430	ENSMOCG00000017969	Cnot1	83	40.442	Microtus_ochrogaster
WBGene00002845	let-711	92	46.835	ENSMMOG00000019134	cnot1	75	42.156	Mola_mola
WBGene00002845	let-711	92	54.430	ENSMODG00000014199	CNOT1	81	40.487	Monodelphis_domestica
WBGene00002845	let-711	91	55.365	ENSMALG00000008645	cnot1	79	41.227	Monopterus_albus
WBGene00002845	let-711	92	54.430	MGP_CAROLIEiJ_G0031430	Cnot1	75	40.725	Mus_caroli
WBGene00002845	let-711	92	54.430	ENSMUSG00000036550	Cnot1	82	40.689	Mus_musculus
WBGene00002845	let-711	92	54.430	MGP_PahariEiJ_G0023028	Cnot1	81	40.442	Mus_pahari
WBGene00002845	let-711	92	54.430	MGP_SPRETEiJ_G0032549	Cnot1	81	40.442	Mus_spretus
WBGene00002845	let-711	92	54.430	ENSMPUG00000004830	CNOT1	81	40.440	Mustela_putorius_furo
WBGene00002845	let-711	92	54.430	ENSMLUG00000003728	CNOT1	81	40.382	Myotis_lucifugus
WBGene00002845	let-711	92	54.430	ENSNGAG00000018628	Cnot1	81	40.440	Nannospalax_galili
WBGene00002845	let-711	92	54.008	ENSNBRG00000019358	cnot1	73	44.202	Neolamprologus_brichardi
WBGene00002845	let-711	92	54.430	ENSNLEG00000003566	CNOT1	81	40.498	Nomascus_leucogenys
WBGene00002845	let-711	82	56.604	ENSMEUG00000006145	CNOT1	72	39.825	Notamacropus_eugenii
WBGene00002845	let-711	87	53.571	ENSOPRG00000005604	CNOT1	67	53.571	Ochotona_princeps
WBGene00002845	let-711	92	54.430	ENSODEG00000016337	CNOT1	81	40.440	Octodon_degus
WBGene00002845	let-711	92	54.008	ENSONIG00000007358	cnot1	78	41.090	Oreochromis_niloticus
WBGene00002845	let-711	92	54.430	ENSOANG00000012109	CNOT1	91	40.424	Ornithorhynchus_anatinus
WBGene00002845	let-711	92	54.430	ENSOCUG00000006911	CNOT1	81	40.440	Oryctolagus_cuniculus
WBGene00002845	let-711	91	55.365	ENSORLG00000013734	cnot1	77	41.274	Oryzias_latipes
WBGene00002845	let-711	81	40.193	ENSORLG00020017012	cnot1	76	40.382	Oryzias_latipes_hni
WBGene00002845	let-711	81	40.193	ENSORLG00015007091	cnot1	76	40.382	Oryzias_latipes_hsok
WBGene00002845	let-711	81	40.296	ENSOMEG00000015124	cnot1	78	39.740	Oryzias_melastigma
WBGene00002845	let-711	92	54.430	ENSOGAG00000000543	CNOT1	77	41.528	Otolemur_garnettii
WBGene00002845	let-711	92	54.430	ENSOARG00000001567	CNOT1	81	40.440	Ovis_aries
WBGene00002845	let-711	92	54.430	ENSPPAG00000022013	CNOT1	82	40.277	Pan_paniscus
WBGene00002845	let-711	92	54.430	ENSPPRG00000004867	CNOT1	81	40.440	Panthera_pardus
WBGene00002845	let-711	92	54.430	ENSPTIG00000012589	CNOT1	81	40.440	Panthera_tigris_altaica
WBGene00002845	let-711	92	54.430	ENSPTRG00000008183	CNOT1	82	40.277	Pan_troglodytes
WBGene00002845	let-711	92	54.430	ENSPANG00000020901	CNOT1	81	39.873	Papio_anubis
WBGene00002845	let-711	92	54.008	ENSPKIG00000023538	CNOT1	82	40.896	Paramormyrops_kingsleyae
WBGene00002845	let-711	92	54.008	ENSPKIG00000002914	CNOT1	78	40.981	Paramormyrops_kingsleyae
WBGene00002845	let-711	92	54.430	ENSPSIG00000005499	CNOT1	82	39.908	Pelodiscus_sinensis
WBGene00002845	let-711	92	54.008	ENSPMGG00000002161	-	98	51.376	Periophthalmus_magnuspinnatus
WBGene00002845	let-711	92	54.852	ENSPEMG00000014520	-	99	38.462	Peromyscus_maniculatus_bairdii
WBGene00002845	let-711	89	55.459	ENSPMAG00000009381	cnot1	83	40.848	Petromyzon_marinus
WBGene00002845	let-711	92	54.430	ENSPCIG00000007343	CNOT1	80	53.770	Phascolarctos_cinereus
WBGene00002845	let-711	83	55.869	ENSPFOG00000003497	cnot1	77	41.118	Poecilia_formosa
WBGene00002845	let-711	92	54.008	ENSPLAG00000014018	cnot1	76	53.571	Poecilia_latipinna
WBGene00002845	let-711	92	54.008	ENSPMEG00000005868	cnot1	77	53.571	Poecilia_mexicana
WBGene00002845	let-711	92	54.008	ENSPREG00000018793	cnot1	76	53.571	Poecilia_reticulata
WBGene00002845	let-711	92	54.430	ENSPPYG00000007410	CNOT1	81	40.440	Pongo_abelii
WBGene00002845	let-711	92	51.899	ENSPCAG00000003241	CNOT1	66	47.733	Procavia_capensis
WBGene00002845	let-711	92	54.430	ENSPCOG00000027139	CNOT1	82	40.289	Propithecus_coquereli
WBGene00002845	let-711	84	59.884	ENSPVAG00000004243	CNOT1	81	59.884	Pteropus_vampyrus
WBGene00002845	let-711	92	54.008	ENSPNYG00000012919	cnot1	76	44.202	Pundamilia_nyererei
WBGene00002845	let-711	92	54.008	ENSPNAG00000000246	cnot1	79	41.785	Pygocentrus_nattereri
WBGene00002845	let-711	92	54.430	ENSRNOG00000012271	Cnot1	81	40.442	Rattus_norvegicus
WBGene00002845	let-711	92	54.430	ENSRBIG00000044598	CNOT1	83	40.277	Rhinopithecus_bieti
WBGene00002845	let-711	92	54.430	ENSRROG00000000906	CNOT1	81	40.440	Rhinopithecus_roxellana
WBGene00002845	let-711	92	54.430	ENSSBOG00000029155	CNOT1	81	39.632	Saimiri_boliviensis_boliviensis
WBGene00002845	let-711	92	54.430	ENSSHAG00000012187	CNOT1	81	40.625	Sarcophilus_harrisii
WBGene00002845	let-711	87	39.606	ENSSFOG00015017614	cnot1	81	39.326	Scleropages_formosus
WBGene00002845	let-711	92	54.008	ENSSMAG00000013844	cnot1	76	44.202	Scophthalmus_maximus
WBGene00002845	let-711	92	54.008	ENSSDUG00000021491	cnot1	74	44.202	Seriola_dumerili
WBGene00002845	let-711	92	54.008	ENSSLDG00000014816	cnot1	76	44.202	Seriola_lalandi_dorsalis
WBGene00002845	let-711	65	52.695	ENSSARG00000000762	CNOT1	64	58.586	Sorex_araneus
WBGene00002845	let-711	92	54.008	ENSSPAG00000018802	cnot1	79	41.284	Stegastes_partitus
WBGene00002845	let-711	92	54.430	ENSSSCG00000002799	CNOT1	80	53.770	Sus_scrofa
WBGene00002845	let-711	92	54.430	ENSTGUG00000005919	CNOT1	82	39.966	Taeniopygia_guttata
WBGene00002845	let-711	92	54.008	ENSTRUG00000001784	cnot1	99	40.664	Takifugu_rubripes
WBGene00002845	let-711	92	54.008	ENSTNIG00000018706	cnot1	78	41.187	Tetraodon_nigroviridis
WBGene00002845	let-711	92	54.008	ENSTBEG00000000720	CNOT1	65	42.365	Tupaia_belangeri
WBGene00002845	let-711	92	54.430	ENSTTRG00000008460	CNOT1	77	40.267	Tursiops_truncatus
WBGene00002845	let-711	92	54.430	ENSUAMG00000009251	CNOT1	81	40.440	Ursus_americanus
WBGene00002845	let-711	92	54.430	ENSUMAG00000021291	CNOT1	81	40.440	Ursus_maritimus
WBGene00002845	let-711	92	54.430	ENSVPAG00000008846	CNOT1	78	40.146	Vicugna_pacos
WBGene00002845	let-711	79	55.665	ENSVVUG00000024037	CNOT1	79	54.255	Vulpes_vulpes
WBGene00002845	let-711	92	54.430	ENSXETG00000015900	cnot1	82	39.791	Xenopus_tropicalis
WBGene00002845	let-711	92	54.008	ENSXCOG00000013552	cnot1	79	41.227	Xiphophorus_couchianus
WBGene00002845	let-711	92	54.008	ENSXMAG00000006031	cnot1	79	41.227	Xiphophorus_maculatus