EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00002957 (Gene tree)
Gene ID: -
Gene Symbol: let-858
Alias: -
Full Name: Pre-mRNA-splicing factor CWC22 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5540 bases
Position: chrII:11022370-11027909
Accession: Q17336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F33A8	MA3	PF02847.17	1.3e-29	1	1
F33A8	MIF4G	PF02854.19	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F33A8.1	-	2808	NM_063962	F33A8.1	897 (aa)	NP_496363	Q17336

Gene Model

Click here to download WBGene00002957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00002957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00002957	let-858	63	54.561	ENSG00000163510	CWC22	72	55.064	Homo_sapiens
WBGene00002957	let-858	60	54.512	ENSAPOG00000004200	cwc22	61	54.898	Acanthochromis_polyacanthus
WBGene00002957	let-858	84	46.550	ENSAMEG00000011004	CWC22	58	55.784	Ailuropoda_melanoleuca
WBGene00002957	let-858	62	55.000	ENSACIG00000020055	cwc22	61	56.367	Amphilophus_citrinellus
WBGene00002957	let-858	62	54.464	ENSAPEG00000002673	cwc22	54	55.823	Amphiprion_percula
WBGene00002957	let-858	62	54.626	ENSATEG00000005176	cwc22	54	55.515	Anabas_testudineus
WBGene00002957	let-858	62	53.641	ENSACAG00000009438	CWC22	60	54.898	Anolis_carolinensis
WBGene00002957	let-858	63	54.386	ENSANAG00000028324	CWC22	59	55.064	Aotus_nancymaae
WBGene00002957	let-858	62	54.189	ENSACLG00000025447	cwc22	76	55.888	Astatotilapia_calliptera
WBGene00002957	let-858	85	47.462	ENSBTAG00000021726	CWC22	59	55.701	Bos_taurus
WBGene00002957	let-858	63	54.130	ENSCAFG00000014160	CWC22	58	55.784	Canis_familiaris
WBGene00002957	let-858	63	53.968	ENSCAFG00020007223	CWC22	65	58.333	Canis_lupus_dingo
WBGene00002957	let-858	63	54.386	ENSCHIG00000017150	CWC22	59	55.784	Capra_hircus
WBGene00002957	let-858	85	43.995	ENSTSYG00000035591	-	65	51.301	Carlito_syrichta
WBGene00002957	let-858	87	42.857	ENSTSYG00000028686	-	61	48.134	Carlito_syrichta
WBGene00002957	let-858	89	42.927	ENSTSYG00000026635	-	59	50.566	Carlito_syrichta
WBGene00002957	let-858	62	50.980	ENSCAPG00000002064	CWC22	62	51.024	Cavia_aperea
WBGene00002957	let-858	62	54.724	ENSCPOG00000007492	CWC22	59	55.243	Cavia_porcellus
WBGene00002957	let-858	84	45.592	ENSCCAG00000021239	CWC22	58	51.750	Cebus_capucinus
WBGene00002957	let-858	62	54.902	ENSCLAG00000011118	CWC22	59	55.431	Chinchilla_lanigera
WBGene00002957	let-858	63	54.386	ENSCSAG00000012925	CWC22	59	55.064	Chlorocebus_sabaeus
WBGene00002957	let-858	62	48.673	ENSCHOG00000006362	CWC22	59	49.067	Choloepus_hoffmanni
WBGene00002957	let-858	65	53.650	ENSCPBG00000001765	CWC22	59	55.243	Chrysemys_picta_bellii
WBGene00002957	let-858	60	53.061	ENSCING00000008865	-	69	53.148	Ciona_intestinalis
WBGene00002957	let-858	61	51.818	ENSCSAVG00000003537	-	92	47.431	Ciona_savignyi
WBGene00002957	let-858	63	53.726	ENSCGRG00001017005	-	74	54.862	Cricetulus_griseus_chok1gshd
WBGene00002957	let-858	63	53.726	ENSCGRG00000001934	-	59	54.862	Cricetulus_griseus_crigri
WBGene00002957	let-858	60	50.642	ENSCSEG00000005257	cwc22	59	50.460	Cynoglossus_semilaevis
WBGene00002957	let-858	62	55.476	ENSCVAG00000009836	cwc22	53	56.747	Cyprinodon_variegatus
WBGene00002957	let-858	62	54.497	ENSDARG00000014008	cwc22	55	55.882	Danio_rerio
WBGene00002957	let-858	60	44.649	ENSDNOG00000032640	-	74	44.590	Dasypus_novemcinctus
WBGene00002957	let-858	62	55.221	ENSDNOG00000003020	-	59	55.801	Dasypus_novemcinctus
WBGene00002957	let-858	59	55.680	ENSDORG00000011483	-	58	55.514	Dipodomys_ordii
WBGene00002957	let-858	57	57.143	ENSETEG00000013355	CWC22	74	48.694	Echinops_telfairi
WBGene00002957	let-858	63	54.386	ENSEASG00005022287	CWC22	58	55.514	Equus_asinus_asinus
WBGene00002957	let-858	87	46.359	ENSECAG00000010769	CWC22	58	55.597	Equus_caballus
WBGene00002957	let-858	66	51.144	ENSELUG00000010536	cwc22	96	51.240	Esox_lucius
WBGene00002957	let-858	84	47.229	ENSFCAG00000018982	CWC22	58	55.514	Felis_catus
WBGene00002957	let-858	60	54.630	ENSFALG00000003495	CWC22	58	54.887	Ficedula_albicollis
WBGene00002957	let-858	63	54.754	ENSFDAG00000010857	CWC22	59	55.827	Fukomys_damarensis
WBGene00002957	let-858	62	54.919	ENSFHEG00000009620	cwc22	54	56.747	Fundulus_heteroclitus
WBGene00002957	let-858	63	52.962	ENSGMOG00000009084	cwc22	86	54.044	Gadus_morhua
WBGene00002957	let-858	59	55.327	ENSGALG00000009001	CWC22	57	54.887	Gallus_gallus
WBGene00002957	let-858	60	56.157	ENSGAFG00000021155	cwc22	64	55.993	Gambusia_affinis
WBGene00002957	let-858	62	54.626	ENSGACG00000002071	cwc22	68	54.466	Gasterosteus_aculeatus
WBGene00002957	let-858	65	53.584	ENSGAGG00000013471	CWC22	59	54.869	Gopherus_agassizii
WBGene00002957	let-858	61	53.971	ENSHBUG00000010504	cwc22	60	55.660	Haplochromis_burtoni
WBGene00002957	let-858	86	45.397	ENSHGLG00000005692	CWC22	61	55.056	Heterocephalus_glaber_female
WBGene00002957	let-858	63	53.565	ENSHGLG00100016497	CWC22	77	55.056	Heterocephalus_glaber_male
WBGene00002957	let-858	60	54.851	ENSHCOG00000004206	cwc22	63	54.869	Hippocampus_comes
WBGene00002957	let-858	61	55.027	ENSIPUG00000005831	cwc22	57	55.618	Ictalurus_punctatus
WBGene00002957	let-858	87	45.913	ENSSTOG00000009788	CWC22	58	55.243	Ictidomys_tridecemlineatus
WBGene00002957	let-858	62	54.433	ENSJJAG00000017012	-	59	55.970	Jaculus_jaculus
WBGene00002957	let-858	62	54.937	ENSKMAG00000005228	cwc22	54	55.904	Kryptolebias_marmoratus
WBGene00002957	let-858	61	52.844	ENSLBEG00000020518	cwc22	72	48.065	Labrus_bergylta
WBGene00002957	let-858	61	53.832	ENSLOCG00000006456	cwc22	56	56.250	Lepisosteus_oculatus
WBGene00002957	let-858	87	46.106	ENSLAFG00000014802	CWC22	58	55.597	Loxodonta_africana
WBGene00002957	let-858	84	47.832	ENSMFAG00000000590	CWC22	62	55.327	Macaca_fascicularis
WBGene00002957	let-858	84	47.832	ENSMNEG00000034567	CWC22	59	55.327	Macaca_nemestrina
WBGene00002957	let-858	84	47.771	ENSMLEG00000042344	CWC22	59	55.327	Mandrillus_leucophaeus
WBGene00002957	let-858	62	53.982	ENSMAMG00000018888	cwc22	53	55.431	Mastacembelus_armatus
WBGene00002957	let-858	62	54.189	ENSMZEG00005021449	cwc22	53	55.888	Maylandia_zebra
WBGene00002957	let-858	62	54.204	ENSMGAG00000009220	CWC22	59	54.699	Meleagris_gallopavo
WBGene00002957	let-858	72	44.857	ENSMAUG00000016154	-	60	53.813	Mesocricetus_auratus
WBGene00002957	let-858	84	47.442	ENSMICG00000016919	CWC22	60	55.224	Microcebus_murinus
WBGene00002957	let-858	58	53.167	ENSMMOG00000019720	cwc22	74	53.551	Mola_mola
WBGene00002957	let-858	62	51.899	ENSMODG00000003711	-	97	53.061	Monodelphis_domestica
WBGene00002957	let-858	60	52.593	ENSMODG00000020117	-	96	52.690	Monodelphis_domestica
WBGene00002957	let-858	63	54.833	ENSMODG00000010233	-	59	56.238	Monodelphis_domestica
WBGene00002957	let-858	85	46.506	MGP_CAROLIEiJ_G0023696	-	73	55.229	Mus_caroli
WBGene00002957	let-858	62	53.299	ENSMUSG00000096337	Gm13694	65	55.083	Mus_musculus
WBGene00002957	let-858	62	53.765	ENSMUSG00000027014	Cwc22	74	55.413	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000095824	Gm13697	65	55.083	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000096729	Gm13695	65	54.613	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000094336	Gm13693	65	55.083	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000094125	Gm13698	65	55.083	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000096484	Gm13696	65	55.083	Mus_musculus
WBGene00002957	let-858	62	53.299	ENSMUSG00000079247	Gm13691	65	55.083	Mus_musculus
WBGene00002957	let-858	84	47.368	MGP_PahariEiJ_G0025147	-	73	55.046	Mus_pahari
WBGene00002957	let-858	63	53.968	ENSMPUG00000002432	CWC22	58	55.784	Mustela_putorius_furo
WBGene00002957	let-858	63	54.035	ENSMLUG00000024966	-	67	54.953	Myotis_lucifugus
WBGene00002957	let-858	81	48.177	ENSMLUG00000013437	-	63	55.701	Myotis_lucifugus
WBGene00002957	let-858	81	43.620	ENSNGAG00000013881	-	77	52.998	Nannospalax_galili
WBGene00002957	let-858	62	50.799	ENSMEUG00000011026	CWC22	93	51.789	Notamacropus_eugenii
WBGene00002957	let-858	51	53.261	ENSOPRG00000007844	CWC22	56	53.057	Ochotona_princeps
WBGene00002957	let-858	55	52.663	ENSODEG00000007673	CWC22	80	52.705	Octodon_degus
WBGene00002957	let-858	51	50.881	ENSODEG00000005934	-	69	50.218	Octodon_degus
WBGene00002957	let-858	86	47.402	ENSOANG00000008649	CWC22	66	54.510	Ornithorhynchus_anatinus
WBGene00002957	let-858	62	55.197	ENSORLG00000010538	cwc22	56	56.554	Oryzias_latipes
WBGene00002957	let-858	62	55.197	ENSORLG00015018073	cwc22	56	56.554	Oryzias_latipes_hsok
WBGene00002957	let-858	62	56.014	ENSOMEG00000015199	cwc22	57	56.007	Oryzias_melastigma
WBGene00002957	let-858	63	54.386	ENSOARG00000016905	CWC22	59	55.701	Ovis_aries
WBGene00002957	let-858	63	54.321	ENSPPRG00000001389	CWC22	58	55.514	Panthera_pardus
WBGene00002957	let-858	63	54.321	ENSPTIG00000019139	CWC22	58	55.514	Panthera_tigris_altaica
WBGene00002957	let-858	84	47.771	ENSPANG00000018976	CWC22	59	55.327	Papio_anubis
WBGene00002957	let-858	62	54.145	ENSPKIG00000021346	cwc22	63	53.789	Paramormyrops_kingsleyae
WBGene00002957	let-858	65	53.311	ENSPSIG00000008632	CWC22	59	55.056	Pelodiscus_sinensis
WBGene00002957	let-858	62	51.250	ENSPMGG00000020129	cwc22	71	49.054	Periophthalmus_magnuspinnatus
WBGene00002957	let-858	63	50.604	ENSPEMG00000023936	-	76	53.061	Peromyscus_maniculatus_bairdii
WBGene00002957	let-858	86	44.030	ENSPMAG00000005914	cwc22	63	53.663	Petromyzon_marinus
WBGene00002957	let-858	63	54.594	ENSPCIG00000009903	-	74	56.052	Phascolarctos_cinereus
WBGene00002957	let-858	61	56.124	ENSPFOG00000015025	cwc22	71	56.410	Poecilia_formosa
WBGene00002957	let-858	61	56.124	ENSPLAG00000021405	cwc22	53	56.667	Poecilia_latipinna
WBGene00002957	let-858	61	55.941	ENSPMEG00000007850	cwc22	53	56.481	Poecilia_mexicana
WBGene00002957	let-858	60	54.713	ENSPREG00000004312	cwc22	62	55.268	Poecilia_reticulata
WBGene00002957	let-858	63	54.561	ENSPPYG00000012986	CWC22	63	53.621	Pongo_abelii
WBGene00002957	let-858	54	55.556	ENSPCOG00000010195	CWC22	55	53.333	Propithecus_coquereli
WBGene00002957	let-858	84	47.402	ENSPVAG00000011497	CWC22	58	55.431	Pteropus_vampyrus
WBGene00002957	let-858	62	52.406	ENSPNYG00000010435	cwc22	76	54.019	Pundamilia_nyererei
WBGene00002957	let-858	63	52.817	ENSRNOG00000012651	Cwc22	70	48.195	Rattus_norvegicus
WBGene00002957	let-858	84	45.063	ENSRNOG00000038322	LOC500684	70	48.056	Rattus_norvegicus
WBGene00002957	let-858	63	52.632	ENSRBIG00000036751	CWC22	59	53.223	Rhinopithecus_bieti
WBGene00002957	let-858	63	54.561	ENSRROG00000037520	CWC22	60	55.064	Rhinopithecus_roxellana
WBGene00002957	let-858	61	50.270	ENSSHAG00000004040	-	74	50.749	Sarcophilus_harrisii
WBGene00002957	let-858	64	54.124	ENSSHAG00000016596	-	61	55.535	Sarcophilus_harrisii
WBGene00002957	let-858	63	53.509	ENSSMAG00000004724	cwc22	59	53.976	Scophthalmus_maximus
WBGene00002957	let-858	62	55.296	ENSSDUG00000010656	cwc22	53	56.180	Seriola_dumerili
WBGene00002957	let-858	61	54.909	ENSSLDG00000023157	cwc22	76	55.805	Seriola_lalandi_dorsalis
WBGene00002957	let-858	62	54.578	ENSSPAG00000008746	cwc22	54	55.823	Stegastes_partitus
WBGene00002957	let-858	63	54.386	ENSSSCG00000016008	CWC22	59	55.701	Sus_scrofa
WBGene00002957	let-858	82	47.775	ENSTGUG00000009340	-	61	54.682	Taeniopygia_guttata
WBGene00002957	let-858	62	54.741	ENSTRUG00000014411	cwc22	56	56.157	Takifugu_rubripes
WBGene00002957	let-858	60	52.878	ENSTNIG00000005074	cwc22	71	54.364	Tetraodon_nigroviridis
WBGene00002957	let-858	79	47.751	ENSTBEG00000014539	CWC22	50	50.711	Tupaia_belangeri
WBGene00002957	let-858	63	54.450	ENSTTRG00000012142	CWC22	62	53.929	Tursiops_truncatus
WBGene00002957	let-858	84	46.725	ENSUAMG00000010342	CWC22	58	55.784	Ursus_americanus
WBGene00002957	let-858	84	46.725	ENSUMAG00000016730	CWC22	58	55.784	Ursus_maritimus
WBGene00002957	let-858	62	53.792	ENSVPAG00000008565	CWC22	58	55.597	Vicugna_pacos
WBGene00002957	let-858	63	53.968	ENSVVUG00000009738	CWC22	58	55.784	Vulpes_vulpes
WBGene00002957	let-858	61	53.777	ENSXETG00000014099	cwc22	69	53.775	Xenopus_tropicalis
WBGene00002957	let-858	60	56.538	ENSXMAG00000013201	cwc22	54	56.481	Xiphophorus_maculatus