EuRBPDB

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  • Description
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00002978 (Gene tree)
Gene ID
-
Gene Symbol
lev-11
Alias
tmy-1
Full Name
Tropomyosin isoforms a/b/d/f
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
putative
Strand
Minus strand
Length
10082
Position
chrI: 14621173-14631254
Accession
Q22866
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
Y105E8B.1q-1489-Y105E8B.1q284 (aa)NP_001300459A0A0K3ATS1
Y105E8B.1p-1489-Y105E8B.1p284 (aa)NP_001300458A0A0K3ARC0
Y105E8B.1s-1489-Y105E8B.1s284 (aa)NP_001300461A0A0K3AUC2
Y105E8B.1r-1489-Y105E8B.1r284 (aa)NP_001300460A0A0K3AQT4
Y105E8B.1t-1308-Y105E8B.1t256 (aa)NP_001337289A0A1Q2U2F4
Y105E8B.1n.2-821-Y105E8B.1n.2155 (aa)NP_001300456A0A0K3AUC0
Y105E8B.1n.1-1267-Y105E8B.1n.1155 (aa)NP_001300456A0A0K3AUC0
Y105E8B.1a-1485-Y105E8B.1a284 (aa)NP_001021695Q22866
Y105E8B.1b.2-1478-Y105E8B.1b.2193 (aa)NP_001021696UPI000021CEB6
Y105E8B.1c-1321-Y105E8B.1c256 (aa)NP_001021697UPI000006124F
Y105E8B.1d-1686-Y105E8B.1d284 (aa)NP_001021698UPI000006124C
Y105E8B.1g-1683-Y105E8B.1g284 (aa)NP_001263595K8FDX2
Y105E8B.1f-763-Y105E8B.1f151 (aa)NP_001021700UPI000021CEB5
Y105E8B.1k-1111-Y105E8B.1k256 (aa)NP_001300453A0A0K3ARB5
Y105E8B.1j-1464-Y105E8B.1j155 (aa)NP_001263597K8ERM4
Y105E8B.1l-1111-Y105E8B.1l256 (aa)NP_001300454A0A0K3ATR6
Y105E8B.1o-1489-Y105E8B.1o284 (aa)NP_001300457A0A0K3AWP0
Y105E8B.1e.1-1383-Y105E8B.1e.1256 (aa)NP_001021699Q27249
Y105E8B.1e.2-1185-Y105E8B.1e.2256 (aa)NP_001021699Q27249
Y105E8B.1b.1-1464-Y105E8B.1b.1193 (aa)NP_001021696UPI000021CEB6
Y105E8B.1i.1-1461-Y105E8B.1i.1193 (aa)NP_001263596K8ESC3
Y105E8B.1i.2-1475-Y105E8B.1i.2193 (aa)NP_001263596K8ESC3
Y105E8B.1m.1-1267-Y105E8B.1m.1193 (aa)NP_001300455A0A0K3AQS9
Y105E8B.1m.2-1281-Y105E8B.1m.2193 (aa)NP_001300455A0A0K3AQS9
Gene Model
Click here to download WBGene00002978's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00002978's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00002978lev-119879.605FBgn0003721Tm19969.395Drosophila_melanogaster
WBGene00002978lev-119961.039ENSMUSG00000027940Tpm39967.143Mus_musculus

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