EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003059 (Gene tree)
Gene ID: -
Gene Symbol: lpd-2
Alias: -
Full Name: LiPid Depleted
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1247 bases
Position: chrI:6253701-6254947
Accession: Q8IG68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C48E7	Sas10_Utp3	PF04000.15	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C48E7.3	-	1064	NM_059405	C48E7.3	318 (aa)	NP_491806	Q8IG68

Gene Model

Click here to download WBGene00003059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003059's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003059	lpd-2	69	36.681	ENSG00000129460	NGDN	74	36.957	Homo_sapiens
WBGene00003059	lpd-2	76	33.333	ENSAPOG00000016411	ngdn	94	32.765	Acanthochromis_polyacanthus
WBGene00003059	lpd-2	69	36.681	ENSAMEG00000016660	NGDN	72	36.681	Ailuropoda_melanoleuca
WBGene00003059	lpd-2	89	30.421	ENSACIG00000021676	ngdn	92	30.128	Amphilophus_citrinellus
WBGene00003059	lpd-2	80	32.463	ENSAOCG00000015818	ngdn	89	31.741	Amphiprion_ocellaris
WBGene00003059	lpd-2	69	34.052	ENSAPEG00000009589	ngdn	85	33.074	Amphiprion_percula
WBGene00003059	lpd-2	85	30.903	ENSATEG00000020513	ngdn	92	30.421	Anabas_testudineus
WBGene00003059	lpd-2	81	33.824	ENSACAG00000007340	NGDN	83	33.824	Anolis_carolinensis
WBGene00003059	lpd-2	69	36.245	ENSANAG00000037066	NGDN	82	35.659	Aotus_nancymaae
WBGene00003059	lpd-2	85	30.742	ENSACLG00000016289	ngdn	87	30.742	Astatotilapia_calliptera
WBGene00003059	lpd-2	78	31.481	ENSAMXG00000000514	ngdn	86	31.618	Astyanax_mexicanus
WBGene00003059	lpd-2	69	37.555	ENSBTAG00000009595	NGDN	79	37.555	Bos_taurus
WBGene00003059	lpd-2	69	36.681	ENSCJAG00000007530	NGDN	73	36.910	Callithrix_jacchus
WBGene00003059	lpd-2	82	34.909	ENSCAFG00000011631	NGDN	86	34.909	Canis_familiaris
WBGene00003059	lpd-2	82	34.909	ENSCAFG00020004943	NGDN	86	34.909	Canis_lupus_dingo
WBGene00003059	lpd-2	69	37.555	ENSCHIG00000015780	NGDN	73	37.555	Capra_hircus
WBGene00003059	lpd-2	69	36.245	ENSTSYG00000009606	NGDN	73	36.522	Carlito_syrichta
WBGene00003059	lpd-2	69	35.652	ENSCAPG00000014742	NGDN	85	35.652	Cavia_aperea
WBGene00003059	lpd-2	69	36.245	ENSCPOG00000008240	NGDN	73	36.245	Cavia_porcellus
WBGene00003059	lpd-2	69	36.481	ENSCCAG00000023047	NGDN	73	35.808	Cebus_capucinus
WBGene00003059	lpd-2	69	36.681	ENSCATG00000042790	NGDN	74	36.957	Cercocebus_atys
WBGene00003059	lpd-2	70	36.017	ENSCLAG00000012885	NGDN	75	35.294	Chinchilla_lanigera
WBGene00003059	lpd-2	69	36.681	ENSCSAG00000015952	NGDN	73	36.957	Chlorocebus_sabaeus
WBGene00003059	lpd-2	69	36.596	ENSCHOG00000009857	NGDN	74	35.622	Choloepus_hoffmanni
WBGene00003059	lpd-2	86	33.793	ENSCPBG00000025903	NGDN	70	33.219	Chrysemys_picta_bellii
WBGene00003059	lpd-2	69	36.681	ENSCANG00000031356	NGDN	73	36.957	Colobus_angolensis_palliatus
WBGene00003059	lpd-2	70	37.344	ENSCGRG00001024371	Ngdn	75	35.745	Cricetulus_griseus_chok1gshd
WBGene00003059	lpd-2	70	37.344	ENSCGRG00000018219	Ngdn	75	35.745	Cricetulus_griseus_crigri
WBGene00003059	lpd-2	70	34.440	ENSCSEG00000008801	ngdn	78	33.208	Cynoglossus_semilaevis
WBGene00003059	lpd-2	78	32.830	ENSDARG00000045372	ngdn	81	30.268	Danio_rerio
WBGene00003059	lpd-2	69	36.364	ENSDNOG00000005395	NGDN	73	36.052	Dasypus_novemcinctus
WBGene00003059	lpd-2	69	35.865	ENSDORG00000010731	Ngdn	73	36.245	Dipodomys_ordii
WBGene00003059	lpd-2	67	30.992	FBgn0031736	CG11030	72	31.405	Drosophila_melanogaster
WBGene00003059	lpd-2	69	36.681	ENSETEG00000007531	NGDN	74	36.481	Echinops_telfairi
WBGene00003059	lpd-2	69	38.528	ENSEASG00005011793	NGDN	79	38.528	Equus_asinus_asinus
WBGene00003059	lpd-2	82	35.740	ENSECAG00000006081	NGDN	86	35.740	Equus_caballus
WBGene00003059	lpd-2	55	39.560	ENSEEUG00000011829	NGDN	76	38.333	Erinaceus_europaeus
WBGene00003059	lpd-2	78	31.439	ENSELUG00000022676	ngdn	82	30.035	Esox_lucius
WBGene00003059	lpd-2	82	35.000	ENSFCAG00000009093	NGDN	86	33.571	Felis_catus
WBGene00003059	lpd-2	69	36.681	ENSFDAG00000011611	NGDN	73	36.957	Fukomys_damarensis
WBGene00003059	lpd-2	83	31.429	ENSFHEG00000007207	ngdn	85	30.515	Fundulus_heteroclitus
WBGene00003059	lpd-2	69	33.333	ENSGMOG00000003876	ngdn	81	32.456	Gadus_morhua
WBGene00003059	lpd-2	77	33.460	ENSGACG00000002164	ngdn	89	33.712	Gasterosteus_aculeatus
WBGene00003059	lpd-2	86	33.566	ENSGAGG00000016471	NGDN	83	34.902	Gopherus_agassizii
WBGene00003059	lpd-2	69	36.681	ENSGGOG00000005000	NGDN	73	36.957	Gorilla_gorilla
WBGene00003059	lpd-2	86	30.719	ENSHBUG00000019489	ngdn	87	30.496	Haplochromis_burtoni
WBGene00003059	lpd-2	69	36.596	ENSHGLG00000008896	NGDN	73	36.957	Heterocephalus_glaber_female
WBGene00003059	lpd-2	69	36.596	ENSHGLG00100014352	NGDN	73	36.957	Heterocephalus_glaber_male
WBGene00003059	lpd-2	81	31.734	ENSHCOG00000019913	ngdn	84	30.855	Hippocampus_comes
WBGene00003059	lpd-2	78	32.090	ENSIPUG00000008128	ngdn	89	31.228	Ictalurus_punctatus
WBGene00003059	lpd-2	69	37.447	ENSSTOG00000002637	NGDN	73	36.087	Ictidomys_tridecemlineatus
WBGene00003059	lpd-2	69	33.333	ENSJJAG00000010601	-	72	33.333	Jaculus_jaculus
WBGene00003059	lpd-2	83	33.692	ENSKMAG00000018719	ngdn	87	30.769	Kryptolebias_marmoratus
WBGene00003059	lpd-2	78	34.328	ENSLBEG00000027237	ngdn	86	34.296	Labrus_bergylta
WBGene00003059	lpd-2	69	37.447	ENSLAFG00000013953	NGDN	73	36.364	Loxodonta_africana
WBGene00003059	lpd-2	69	36.245	ENSMFAG00000033387	NGDN	73	36.522	Macaca_fascicularis
WBGene00003059	lpd-2	69	36.245	ENSMMUG00000014766	NGDN	73	36.522	Macaca_mulatta
WBGene00003059	lpd-2	63	37.143	ENSMNEG00000038334	NGDN	68	37.441	Macaca_nemestrina
WBGene00003059	lpd-2	69	36.681	ENSMLEG00000037525	NGDN	73	36.957	Mandrillus_leucophaeus
WBGene00003059	lpd-2	81	30.714	ENSMAMG00000007995	ngdn	84	30.450	Mastacembelus_armatus
WBGene00003059	lpd-2	85	30.742	ENSMZEG00005011874	ngdn	87	30.742	Maylandia_zebra
WBGene00003059	lpd-2	76	35.547	ENSMAUG00000011909	Ngdn	86	36.364	Mesocricetus_auratus
WBGene00003059	lpd-2	69	35.808	ENSMICG00000010111	NGDN	73	36.087	Microcebus_murinus
WBGene00003059	lpd-2	73	36.327	ENSMOCG00000021605	Ngdn	79	36.508	Microtus_ochrogaster
WBGene00003059	lpd-2	80	31.852	ENSMMOG00000005420	ngdn	82	32.841	Mola_mola
WBGene00003059	lpd-2	69	35.319	ENSMODG00000004257	NGDN	71	34.764	Monodelphis_domestica
WBGene00003059	lpd-2	70	35.865	MGP_CAROLIEiJ_G0019285	Ngdn	75	35.865	Mus_caroli
WBGene00003059	lpd-2	70	36.626	ENSMUSG00000022204	Ngdn	75	36.287	Mus_musculus
WBGene00003059	lpd-2	70	38.272	MGP_PahariEiJ_G0030302	Ngdn	75	35.865	Mus_pahari
WBGene00003059	lpd-2	70	36.287	MGP_SPRETEiJ_G0020174	Ngdn	75	36.287	Mus_spretus
WBGene00003059	lpd-2	69	37.872	ENSMPUG00000006439	NGDN	79	37.118	Mustela_putorius_furo
WBGene00003059	lpd-2	70	37.083	ENSMLUG00000017232	NGDN	73	36.441	Myotis_lucifugus
WBGene00003059	lpd-2	70	35.865	ENSNGAG00000003165	Ngdn	75	36.287	Nannospalax_galili
WBGene00003059	lpd-2	69	36.681	ENSNLEG00000027739	NGDN	73	36.957	Nomascus_leucogenys
WBGene00003059	lpd-2	69	36.364	ENSMEUG00000010596	NGDN	73	37.339	Notamacropus_eugenii
WBGene00003059	lpd-2	70	35.745	ENSOPRG00000016594	NGDN	75	35.745	Ochotona_princeps
WBGene00003059	lpd-2	69	35.443	ENSODEG00000002730	NGDN	75	35.371	Octodon_degus
WBGene00003059	lpd-2	69	35.345	ENSOANG00000013060	NGDN	73	35.345	Ornithorhynchus_anatinus
WBGene00003059	lpd-2	69	35.193	ENSOCUG00000013973	NGDN	73	36.681	Oryctolagus_cuniculus
WBGene00003059	lpd-2	79	31.179	ENSORLG00000006124	ngdn	73	32.932	Oryzias_latipes
WBGene00003059	lpd-2	69	33.333	ENSORLG00020004656	ngdn	78	32.530	Oryzias_latipes_hni
WBGene00003059	lpd-2	79	31.179	ENSORLG00015001467	ngdn	78	32.932	Oryzias_latipes_hsok
WBGene00003059	lpd-2	79	32.707	ENSOMEG00000016586	ngdn	89	32.526	Oryzias_melastigma
WBGene00003059	lpd-2	69	37.872	ENSOGAG00000008735	NGDN	73	35.808	Otolemur_garnettii
WBGene00003059	lpd-2	69	37.555	ENSOARG00000019301	NGDN	73	37.555	Ovis_aries
WBGene00003059	lpd-2	69	36.681	ENSPPAG00000039327	NGDN	73	36.957	Pan_paniscus
WBGene00003059	lpd-2	82	35.000	ENSPPRG00000020120	NGDN	86	33.571	Panthera_pardus
WBGene00003059	lpd-2	82	35.000	ENSPTIG00000012462	NGDN	86	33.571	Panthera_tigris_altaica
WBGene00003059	lpd-2	69	37.555	ENSPTRG00000006177	NGDN	73	36.957	Pan_troglodytes
WBGene00003059	lpd-2	69	37.555	ENSPANG00000026138	NGDN	73	36.681	Papio_anubis
WBGene00003059	lpd-2	81	33.210	ENSPMGG00000022036	ngdn	91	31.864	Periophthalmus_magnuspinnatus
WBGene00003059	lpd-2	70	35.865	ENSPEMG00000010734	Ngdn	75	35.865	Peromyscus_maniculatus_bairdii
WBGene00003059	lpd-2	70	34.599	ENSPMAG00000004469	ngdn	87	33.091	Petromyzon_marinus
WBGene00003059	lpd-2	69	35.931	ENSPCIG00000012961	NGDN	72	36.052	Phascolarctos_cinereus
WBGene00003059	lpd-2	71	34.694	ENSPFOG00000010423	ngdn	79	33.463	Poecilia_formosa
WBGene00003059	lpd-2	71	34.694	ENSPLAG00000022684	ngdn	79	33.463	Poecilia_latipinna
WBGene00003059	lpd-2	71	35.102	ENSPMEG00000020850	ngdn	79	33.852	Poecilia_mexicana
WBGene00003059	lpd-2	85	30.690	ENSPREG00000011208	ngdn	92	30.333	Poecilia_reticulata
WBGene00003059	lpd-2	85	32.423	ENSPPYG00000005670	NGDN	73	37.391	Pongo_abelii
WBGene00003059	lpd-2	69	36.245	ENSPCOG00000027627	NGDN	73	36.522	Propithecus_coquereli
WBGene00003059	lpd-2	69	37.179	ENSPVAG00000005178	NGDN	74	37.229	Pteropus_vampyrus
WBGene00003059	lpd-2	84	30.496	ENSPNYG00000013193	ngdn	85	30.496	Pundamilia_nyererei
WBGene00003059	lpd-2	78	31.618	ENSPNAG00000005995	ngdn	83	30.882	Pygocentrus_nattereri
WBGene00003059	lpd-2	69	39.662	ENSRNOG00000018069	Ngdn	73	38.197	Rattus_norvegicus
WBGene00003059	lpd-2	69	36.245	ENSRBIG00000035850	NGDN	73	36.957	Rhinopithecus_bieti
WBGene00003059	lpd-2	69	36.245	ENSRROG00000031932	NGDN	79	36.957	Rhinopithecus_roxellana
WBGene00003059	lpd-2	69	36.681	ENSSBOG00000029466	NGDN	78	37.391	Saimiri_boliviensis_boliviensis
WBGene00003059	lpd-2	69	35.065	ENSSHAG00000015351	NGDN	73	35.193	Sarcophilus_harrisii
WBGene00003059	lpd-2	84	32.867	ENSSMAG00000020166	ngdn	92	31.438	Scophthalmus_maximus
WBGene00003059	lpd-2	82	32.364	ENSSDUG00000020600	ngdn	85	32.364	Seriola_dumerili
WBGene00003059	lpd-2	69	34.348	ENSSARG00000000643	NGDN	74	36.957	Sorex_araneus
WBGene00003059	lpd-2	72	34.568	ENSSPAG00000021672	ngdn	77	33.878	Stegastes_partitus
WBGene00003059	lpd-2	69	37.118	ENSSSCG00000002020	-	73	37.118	Sus_scrofa
WBGene00003059	lpd-2	73	30.864	ENSTRUG00000006677	ngdn	82	31.076	Takifugu_rubripes
WBGene00003059	lpd-2	71	34.167	ENSTNIG00000018972	ngdn	79	33.730	Tetraodon_nigroviridis
WBGene00003059	lpd-2	69	37.229	ENSTTRG00000010655	NGDN	74	37.229	Tursiops_truncatus
WBGene00003059	lpd-2	69	37.991	ENSUAMG00000007475	NGDN	79	37.118	Ursus_americanus
WBGene00003059	lpd-2	69	37.991	ENSUMAG00000014789	NGDN	62	37.118	Ursus_maritimus
WBGene00003059	lpd-2	69	36.797	ENSVPAG00000010012	NGDN	74	37.118	Vicugna_pacos
WBGene00003059	lpd-2	82	34.909	ENSVVUG00000025104	NGDN	87	34.909	Vulpes_vulpes
WBGene00003059	lpd-2	73	37.398	ENSXETG00000014562	ngdn	77	35.510	Xenopus_tropicalis
WBGene00003059	lpd-2	72	33.198	ENSXCOG00000005102	ngdn	84	32.558	Xiphophorus_couchianus