EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003062 (Gene tree)
Gene ID: -
Gene Symbol: lpd-6
Alias: -
Full Name: LiPid Depleted
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3384 bases
Position: chrI:3144410-3147793
Accession: O44991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K09H9	Brix	PF04427.18	2.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K09H9.6	-	1842	NM_058707	K09H9.6	573 (aa)	NP_491108	O44991

Gene Model

Click here to download WBGene00003062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003062	lpd-6	60	38.841	ENSG00000243207	PPAN-P2RY11	64	38.841	Homo_sapiens
WBGene00003062	lpd-6	56	39.564	ENSG00000130810	PPAN	99	39.535	Homo_sapiens
WBGene00003062	lpd-6	85	34.205	ENSAPOG00000017687	ppan	61	40.058	Acanthochromis_polyacanthus
WBGene00003062	lpd-6	60	38.905	ENSAMEG00000011989	-	84	37.065	Ailuropoda_melanoleuca
WBGene00003062	lpd-6	50	43.253	ENSACIG00000007417	ppan	63	40.173	Amphilophus_citrinellus
WBGene00003062	lpd-6	85	35.189	ENSAOCG00000005416	ppan	61	40.346	Amphiprion_ocellaris
WBGene00003062	lpd-6	85	35.189	ENSAPEG00000010382	ppan	61	40.346	Amphiprion_percula
WBGene00003062	lpd-6	60	40.462	ENSATEG00000021221	ppan	64	40.462	Anabas_testudineus
WBGene00003062	lpd-6	60	39.769	ENSACAG00000003838	-	64	39.167	Anolis_carolinensis
WBGene00003062	lpd-6	60	39.420	ENSANAG00000020371	-	80	37.726	Aotus_nancymaae
WBGene00003062	lpd-6	56	38.820	ENSANAG00000038012	-	86	38.671	Aotus_nancymaae
WBGene00003062	lpd-6	87	34.297	ENSACLG00000019215	ppan	59	41.325	Astatotilapia_calliptera
WBGene00003062	lpd-6	90	34.280	ENSAMXG00000032540	ppan	59	41.543	Astyanax_mexicanus
WBGene00003062	lpd-6	60	39.481	ENSBTAG00000012745	PPAN	83	38.060	Bos_taurus
WBGene00003062	lpd-6	60	39.710	ENSCJAG00000039296	PPAN	72	39.710	Callithrix_jacchus
WBGene00003062	lpd-6	60	39.193	ENSCAFG00000017917	P2RY11	73	37.028	Canis_familiaris
WBGene00003062	lpd-6	60	39.193	ENSCAFG00020023621	-	87	37.028	Canis_lupus_dingo
WBGene00003062	lpd-6	60	39.601	ENSCHIG00000006450	-	84	37.685	Capra_hircus
WBGene00003062	lpd-6	58	39.403	ENSCPOG00000025539	-	90	39.130	Cavia_porcellus
WBGene00003062	lpd-6	60	38.841	ENSCCAG00000032527	-	77	37.669	Cebus_capucinus
WBGene00003062	lpd-6	56	39.564	ENSCATG00000040554	-	79	36.856	Cercocebus_atys
WBGene00003062	lpd-6	58	39.403	ENSCLAG00000009362	-	69	39.403	Chinchilla_lanigera
WBGene00003062	lpd-6	56	39.875	ENSCSAG00000007423	-	70	39.130	Chlorocebus_sabaeus
WBGene00003062	lpd-6	57	41.390	ENSCPBG00000005372	-	64	40.571	Chrysemys_picta_bellii
WBGene00003062	lpd-6	57	39.881	ENSCING00000005420	ppan	72	39.763	Ciona_intestinalis
WBGene00003062	lpd-6	55	35.976	ENSCSAVG00000005816	-	71	35.758	Ciona_savignyi
WBGene00003062	lpd-6	58	39.104	ENSCGRG00001015990	Ppan	80	36.649	Cricetulus_griseus_chok1gshd
WBGene00003062	lpd-6	50	45.675	ENSCSEG00000021023	ppan	55	44.231	Cynoglossus_semilaevis
WBGene00003062	lpd-6	54	41.083	ENSCVAG00000013547	ppan	62	39.714	Cyprinodon_variegatus
WBGene00003062	lpd-6	56	39.877	ENSDARG00000022232	ppan	60	39.877	Danio_rerio
WBGene00003062	lpd-6	51	41.751	ENSDNOG00000047670	-	65	41.751	Dasypus_novemcinctus
WBGene00003062	lpd-6	55	40.752	ENSDORG00000003829	Ppan	90	40.752	Dipodomys_ordii
WBGene00003062	lpd-6	51	41.751	FBgn0010770	ppan	72	39.645	Drosophila_melanogaster
WBGene00003062	lpd-6	60	36.888	ENSETEG00000019286	-	79	35.844	Echinops_telfairi
WBGene00003062	lpd-6	60	38.841	ENSEASG00005010574	-	85	36.211	Equus_asinus_asinus
WBGene00003062	lpd-6	60	38.841	ENSECAG00000024469	-	71	38.841	Equus_caballus
WBGene00003062	lpd-6	61	38.857	ENSFCAG00000009388	-	78	37.531	Felis_catus
WBGene00003062	lpd-6	55	40.694	ENSFHEG00000001554	ppan	62	39.233	Fundulus_heteroclitus
WBGene00003062	lpd-6	92	35.568	ENSGMOG00000003431	ppan	65	38.261	Gadus_morhua
WBGene00003062	lpd-6	88	33.397	ENSGAFG00000015832	ppan	67	38.544	Gambusia_affinis
WBGene00003062	lpd-6	63	41.370	ENSGACG00000013723	ppan	67	41.370	Gasterosteus_aculeatus
WBGene00003062	lpd-6	57	40.483	ENSGAGG00000009455	-	60	40.532	Gopherus_agassizii
WBGene00003062	lpd-6	87	34.503	ENSHBUG00000021830	ppan	59	41.325	Haplochromis_burtoni
WBGene00003062	lpd-6	58	40.476	ENSHGLG00000006964	-	69	40.476	Heterocephalus_glaber_female
WBGene00003062	lpd-6	58	40.476	ENSHGLG00100011618	-	69	40.476	Heterocephalus_glaber_male
WBGene00003062	lpd-6	61	40.278	ENSIPUG00000005082	ppan	54	41.824	Ictalurus_punctatus
WBGene00003062	lpd-6	60	39.710	ENSSTOG00000010828	-	71	39.710	Ictidomys_tridecemlineatus
WBGene00003062	lpd-6	58	38.806	ENSJJAG00000016362	Ppan	81	36.883	Jaculus_jaculus
WBGene00003062	lpd-6	63	39.452	ENSKMAG00000016509	ppan	66	39.452	Kryptolebias_marmoratus
WBGene00003062	lpd-6	54	42.038	ENSLBEG00000020897	ppan	73	42.587	Labrus_bergylta
WBGene00003062	lpd-6	72	34.803	ENSLACG00000001451	ppan	80	36.061	Latimeria_chalumnae
WBGene00003062	lpd-6	57	40.950	ENSLOCG00000007381	ppan	62	40.950	Lepisosteus_oculatus
WBGene00003062	lpd-6	60	38.329	ENSLAFG00000016399	-	80	37.435	Loxodonta_africana
WBGene00003062	lpd-6	56	39.875	ENSMFAG00000042854	-	80	37.340	Macaca_fascicularis
WBGene00003062	lpd-6	60	39.017	ENSMMUG00000017211	PPAN	87	39.286	Macaca_mulatta
WBGene00003062	lpd-6	56	39.875	ENSMNEG00000031363	-	70	39.130	Macaca_nemestrina
WBGene00003062	lpd-6	60	38.841	ENSMLEG00000042991	-	79	37.113	Mandrillus_leucophaeus
WBGene00003062	lpd-6	55	41.640	ENSMAMG00000012418	ppan	58	41.640	Mastacembelus_armatus
WBGene00003062	lpd-6	87	34.297	ENSMZEG00005018872	ppan	77	41.325	Maylandia_zebra
WBGene00003062	lpd-6	67	36.181	ENSMAUG00000000310	Ppan	83	36.181	Mesocricetus_auratus
WBGene00003062	lpd-6	64	38.798	ENSMICG00000047321	-	75	38.798	Microcebus_murinus
WBGene00003062	lpd-6	68	36.725	ENSMOCG00000016402	Ppan	83	37.093	Microtus_ochrogaster
WBGene00003062	lpd-6	87	34.933	ENSMMOG00000011584	ppan	64	41.908	Mola_mola
WBGene00003062	lpd-6	57	39.210	ENSMODG00000005158	PPAN	67	39.210	Monodelphis_domestica
WBGene00003062	lpd-6	83	35.223	ENSMALG00000015931	ppan	59	41.121	Monopterus_albus
WBGene00003062	lpd-6	79	36.052	MGP_CAROLIEiJ_G0031850	Ppan	83	37.186	Mus_caroli
WBGene00003062	lpd-6	72	36.768	ENSMUSG00000004100	Ppan	83	41.104	Mus_musculus
WBGene00003062	lpd-6	75	35.360	MGP_PahariEiJ_G0014716	Ppan	71	38.123	Mus_pahari
WBGene00003062	lpd-6	72	36.620	MGP_SPRETEiJ_G0032974	Ppan	83	37.186	Mus_spretus
WBGene00003062	lpd-6	60	39.193	ENSMPUG00000006866	-	83	37.313	Mustela_putorius_furo
WBGene00003062	lpd-6	57	40.426	ENSMLUG00000014186	-	72	39.429	Myotis_lucifugus
WBGene00003062	lpd-6	50	43.253	ENSNBRG00000008460	ppan	59	41.509	Neolamprologus_brichardi
WBGene00003062	lpd-6	56	39.564	ENSNLEG00000012048	-	70	38.841	Nomascus_leucogenys
WBGene00003062	lpd-6	57	37.994	ENSMEUG00000007968	-	71	37.994	Notamacropus_eugenii
WBGene00003062	lpd-6	58	40.000	ENSODEG00000016743	-	74	38.798	Octodon_degus
WBGene00003062	lpd-6	50	43.599	ENSONIG00000001598	ppan	59	41.325	Oreochromis_niloticus
WBGene00003062	lpd-6	57	39.450	ENSOANG00000006740	PPAN	73	36.927	Ornithorhynchus_anatinus
WBGene00003062	lpd-6	61	40.563	ENSORLG00000005634	ppan	67	40.110	Oryzias_latipes
WBGene00003062	lpd-6	55	42.271	ENSORLG00020003966	ppan	67	40.110	Oryzias_latipes_hni
WBGene00003062	lpd-6	61	40.845	ENSORLG00015016869	ppan	72	44.056	Oryzias_latipes_hsok
WBGene00003062	lpd-6	60	41.908	ENSOMEG00000023943	ppan	64	41.908	Oryzias_melastigma
WBGene00003062	lpd-6	57	41.212	ENSOGAG00000014454	-	83	36.476	Otolemur_garnettii
WBGene00003062	lpd-6	52	38.411	ENSOARG00000014981	-	77	36.000	Ovis_aries
WBGene00003062	lpd-6	56	39.564	ENSPPAG00000039744	-	70	38.841	Pan_paniscus
WBGene00003062	lpd-6	60	39.420	ENSPPRG00000023895	-	84	38.000	Panthera_pardus
WBGene00003062	lpd-6	52	39.203	ENSPTIG00000015960	-	83	37.640	Panthera_tigris_altaica
WBGene00003062	lpd-6	56	39.564	ENSPTRG00000010459	PPAN	70	38.841	Pan_troglodytes
WBGene00003062	lpd-6	56	39.875	ENSPANG00000005948	-	79	37.113	Papio_anubis
WBGene00003062	lpd-6	57	41.298	ENSPMGG00000001212	ppan	64	41.298	Periophthalmus_magnuspinnatus
WBGene00003062	lpd-6	67	36.683	ENSPEMG00000015393	Ppan	83	36.683	Peromyscus_maniculatus_bairdii
WBGene00003062	lpd-6	61	37.892	ENSPCIG00000018786	-	63	37.892	Phascolarctos_cinereus
WBGene00003062	lpd-6	50	42.215	ENSPFOG00000005396	ppan	67	38.005	Poecilia_formosa
WBGene00003062	lpd-6	64	38.005	ENSPLAG00000021445	ppan	67	38.005	Poecilia_latipinna
WBGene00003062	lpd-6	50	42.561	ENSPMEG00000011625	ppan	67	38.275	Poecilia_mexicana
WBGene00003062	lpd-6	50	42.907	ENSPREG00000006330	ppan	67	39.084	Poecilia_reticulata
WBGene00003062	lpd-6	50	38.966	ENSPCAG00000007303	-	70	38.754	Procavia_capensis
WBGene00003062	lpd-6	64	38.798	ENSPCOG00000027096	-	75	38.798	Propithecus_coquereli
WBGene00003062	lpd-6	82	33.962	ENSPVAG00000003673	-	74	36.885	Pteropus_vampyrus
WBGene00003062	lpd-6	87	34.297	ENSPNYG00000013872	ppan	59	41.325	Pundamilia_nyererei
WBGene00003062	lpd-6	55	44.237	ENSPNAG00000017058	ppan	58	44.237	Pygocentrus_nattereri
WBGene00003062	lpd-6	75	36.199	ENSRNOG00000020608	Ppan	83	36.935	Rattus_norvegicus
WBGene00003062	lpd-6	55	40.063	ENSRBIG00000041320	-	80	37.596	Rhinopithecus_bieti
WBGene00003062	lpd-6	53	40.717	ENSRROG00000038245	-	88	39.420	Rhinopithecus_roxellana
WBGene00003062	lpd-6	55	40.063	ENSRROG00000034660	-	80	37.596	Rhinopithecus_roxellana
WBGene00003062	lpd-6	60	38.439	ENSSBOG00000026246	-	81	36.761	Saimiri_boliviensis_boliviensis
WBGene00003062	lpd-6	68	33.735	ENSSHAG00000009305	-	68	39.249	Sarcophilus_harrisii
WBGene00003062	lpd-6	88	33.077	ENSSFOG00015023726	ppan	66	40.462	Scleropages_formosus
WBGene00003062	lpd-6	53	42.997	ENSSMAG00000004098	ppan	57	42.540	Scophthalmus_maximus
WBGene00003062	lpd-6	87	35.038	ENSSDUG00000021301	ppan	65	39.560	Seriola_dumerili
WBGene00003062	lpd-6	87	35.551	ENSSLDG00000016106	ppan	62	40.462	Seriola_lalandi_dorsalis
WBGene00003062	lpd-6	90	34.594	ENSSPAG00000000160	ppan	65	39.402	Stegastes_partitus
WBGene00003062	lpd-6	60	38.905	ENSSSCG00000013662	PPAN	71	39.130	Sus_scrofa
WBGene00003062	lpd-6	54	42.994	ENSTRUG00000007656	ppan	65	41.092	Takifugu_rubripes
WBGene00003062	lpd-6	55	42.587	ENSTNIG00000018564	ppan	65	42.994	Tetraodon_nigroviridis
WBGene00003062	lpd-6	60	36.232	ENSTTRG00000004530	-	80	34.961	Tursiops_truncatus
WBGene00003062	lpd-6	60	39.130	ENSVVUG00000028309	-	87	36.792	Vulpes_vulpes
WBGene00003062	lpd-6	54	42.903	ENSXETG00000022055	ppan	63	41.210	Xenopus_tropicalis
WBGene00003062	lpd-6	50	42.907	ENSXMAG00000028708	ppan	69	36.631	Xiphophorus_maculatus