EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003063 (Gene tree)
Gene ID: -
Gene Symbol: lpd-7
Alias: -
Full Name: Pescadillo homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1914 bases
Position: chrIII:7573350-7575263
Accession: Q95Y89
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R13A5	Pescadillo_N	PF06732.11	1.2e-113	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R13A5.12	-	1723	NM_066260	R13A5.12	531 (aa)	NP_498661	Q95Y89

Gene Model

Click here to download WBGene00003063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003063	lpd-7	81	51.121	ENSG00000100029	PES1	84	52.632	Homo_sapiens
WBGene00003063	lpd-7	79	50.227	ENSAPOG00000010054	pes	75	49.302	Acanthochromis_polyacanthus
WBGene00003063	lpd-7	79	51.364	ENSAMEG00000007417	PES1	74	50.797	Ailuropoda_melanoleuca
WBGene00003063	lpd-7	79	49.773	ENSACIG00000017610	pes	94	42.650	Amphilophus_citrinellus
WBGene00003063	lpd-7	79	50.000	ENSAOCG00000008883	pes	74	49.087	Amphiprion_ocellaris
WBGene00003063	lpd-7	79	50.682	ENSAPEG00000022652	pes	74	49.639	Amphiprion_percula
WBGene00003063	lpd-7	79	49.176	ENSATEG00000007439	pes	73	48.235	Anabas_testudineus
WBGene00003063	lpd-7	76	49.292	ENSAPLG00000014852	PES1	75	47.630	Anas_platyrhynchos
WBGene00003063	lpd-7	79	48.526	ENSACAG00000009723	PES1	93	42.447	Anolis_carolinensis
WBGene00003063	lpd-7	81	51.441	ENSANAG00000036411	PES1	76	51.220	Aotus_nancymaae
WBGene00003063	lpd-7	79	40.625	ENSANAG00000021598	-	73	40.625	Aotus_nancymaae
WBGene00003063	lpd-7	98	43.627	ENSACLG00000000815	pes	94	43.173	Astatotilapia_calliptera
WBGene00003063	lpd-7	79	45.309	ENSAMXG00000001216	pes	94	38.879	Astyanax_mexicanus
WBGene00003063	lpd-7	79	50.794	ENSBTAG00000007728	PES1	74	50.342	Bos_taurus
WBGene00003063	lpd-7	81	51.441	ENSCJAG00000010617	PES1	85	51.220	Callithrix_jacchus
WBGene00003063	lpd-7	79	50.682	ENSCAFG00000012792	PES1	75	48.864	Canis_familiaris
WBGene00003063	lpd-7	79	50.682	ENSCAFG00020000977	PES1	75	48.975	Canis_lupus_dingo
WBGene00003063	lpd-7	98	44.723	ENSCHIG00000015760	PES1	94	43.268	Capra_hircus
WBGene00003063	lpd-7	81	51.663	ENSTSYG00000009798	PES1	76	50.000	Carlito_syrichta
WBGene00003063	lpd-7	64	46.961	ENSCAPG00000007736	-	65	45.556	Cavia_aperea
WBGene00003063	lpd-7	80	42.188	ENSCAPG00000012218	-	77	41.256	Cavia_aperea
WBGene00003063	lpd-7	79	50.676	ENSCPOG00000003565	-	75	49.548	Cavia_porcellus
WBGene00003063	lpd-7	78	49.539	ENSCPOG00000039303	-	76	48.292	Cavia_porcellus
WBGene00003063	lpd-7	80	42.411	ENSCPOG00000022594	-	77	41.480	Cavia_porcellus
WBGene00003063	lpd-7	81	51.441	ENSCCAG00000026457	PES1	76	51.220	Cebus_capucinus
WBGene00003063	lpd-7	81	50.776	ENSCATG00000036948	PES1	76	50.554	Cercocebus_atys
WBGene00003063	lpd-7	81	50.998	ENSCLAG00000010775	PES1	77	50.333	Chinchilla_lanigera
WBGene00003063	lpd-7	79	51.364	ENSCSAG00000009207	PES1	76	50.554	Chlorocebus_sabaeus
WBGene00003063	lpd-7	79	51.467	ENSCPBG00000007548	PES1	76	50.340	Chrysemys_picta_bellii
WBGene00003063	lpd-7	79	51.364	ENSCANG00000039970	PES1	77	50.554	Colobus_angolensis_palliatus
WBGene00003063	lpd-7	62	49.716	ENSCGRG00000015052	Pes1	95	47.714	Cricetulus_griseus_crigri
WBGene00003063	lpd-7	79	48.630	ENSCSEG00000017612	pes	75	48.174	Cynoglossus_semilaevis
WBGene00003063	lpd-7	79	49.773	ENSCVAG00000011600	pes	75	48.630	Cyprinodon_variegatus
WBGene00003063	lpd-7	79	49.886	ENSDARG00000018902	pes	75	49.087	Danio_rerio
WBGene00003063	lpd-7	81	51.111	ENSDNOG00000015709	-	77	50.000	Dasypus_novemcinctus
WBGene00003063	lpd-7	88	34.325	ENSDNOG00000031909	-	93	34.269	Dasypus_novemcinctus
WBGene00003063	lpd-7	79	52.045	ENSDORG00000016636	Pes1	78	50.342	Dipodomys_ordii
WBGene00003063	lpd-7	79	45.558	FBgn0032138	CG4364	70	44.064	Drosophila_melanogaster
WBGene00003063	lpd-7	62	46.154	ENSEBUG00000010234	pes	83	41.446	Eptatretus_burgeri
WBGene00003063	lpd-7	78	42.958	ENSEASG00005010295	PES1	77	42.009	Equus_asinus_asinus
WBGene00003063	lpd-7	79	50.794	ENSECAG00000002578	PES1	73	50.569	Equus_caballus
WBGene00003063	lpd-7	79	50.455	ENSELUG00000003253	pes	74	49.087	Esox_lucius
WBGene00003063	lpd-7	79	52.500	ENSFCAG00000008655	PES1	74	51.025	Felis_catus
WBGene00003063	lpd-7	74	50.602	ENSFALG00000006909	PES1	73	49.515	Ficedula_albicollis
WBGene00003063	lpd-7	79	51.481	ENSFDAG00000019029	PES1	76	50.441	Fukomys_damarensis
WBGene00003063	lpd-7	98	40.951	ENSFHEG00000000287	pes	77	45.080	Fundulus_heteroclitus
WBGene00003063	lpd-7	79	47.392	ENSGMOG00000013010	pes	95	41.360	Gadus_morhua
WBGene00003063	lpd-7	79	51.131	ENSGALG00000007778	PES1	75	49.773	Gallus_gallus
WBGene00003063	lpd-7	79	50.465	ENSGAFG00000012399	pes	76	48.970	Gambusia_affinis
WBGene00003063	lpd-7	80	47.404	ENSGACG00000009302	pes	76	46.727	Gasterosteus_aculeatus
WBGene00003063	lpd-7	79	51.242	ENSGAGG00000010897	PES1	76	50.113	Gopherus_agassizii
WBGene00003063	lpd-7	81	50.776	ENSGGOG00000008530	PES1	76	50.554	Gorilla_gorilla
WBGene00003063	lpd-7	82	39.421	ENSGGOG00000028472	-	75	37.892	Gorilla_gorilla
WBGene00003063	lpd-7	76	38.051	ENSHBUG00000008000	pes	86	37.260	Haplochromis_burtoni
WBGene00003063	lpd-7	79	52.045	ENSHGLG00000018472	PES1	74	50.342	Heterocephalus_glaber_female
WBGene00003063	lpd-7	82	51.322	ENSHGLG00100004887	PES1	76	49.669	Heterocephalus_glaber_male
WBGene00003063	lpd-7	79	49.652	ENSHCOG00000016666	pes	94	42.674	Hippocampus_comes
WBGene00003063	lpd-7	79	49.886	ENSIPUG00000020261	pes1	75	48.966	Ictalurus_punctatus
WBGene00003063	lpd-7	79	51.136	ENSSTOG00000013937	PES1	75	49.431	Ictidomys_tridecemlineatus
WBGene00003063	lpd-7	79	51.364	ENSJJAG00000001782	-	77	49.007	Jaculus_jaculus
WBGene00003063	lpd-7	64	46.742	ENSJJAG00000010640	-	70	47.076	Jaculus_jaculus
WBGene00003063	lpd-7	79	48.636	ENSKMAG00000015285	pes	75	47.489	Kryptolebias_marmoratus
WBGene00003063	lpd-7	79	48.961	ENSLBEG00000012366	pes	75	47.674	Labrus_bergylta
WBGene00003063	lpd-7	79	51.467	ENSLACG00000017116	PES1	94	44.545	Latimeria_chalumnae
WBGene00003063	lpd-7	79	46.189	ENSLOCG00000003935	pes	93	39.595	Lepisosteus_oculatus
WBGene00003063	lpd-7	60	42.982	ENSLAFG00000022882	PES1	72	41.935	Loxodonta_africana
WBGene00003063	lpd-7	79	51.364	ENSMFAG00000044708	PES1	76	50.554	Macaca_fascicularis
WBGene00003063	lpd-7	79	51.364	ENSMMUG00000017562	PES1	76	50.554	Macaca_mulatta
WBGene00003063	lpd-7	79	51.364	ENSMNEG00000029489	PES1	76	50.554	Macaca_nemestrina
WBGene00003063	lpd-7	79	51.364	ENSMLEG00000038584	PES1	76	50.554	Mandrillus_leucophaeus
WBGene00003063	lpd-7	79	36.916	ENSMLEG00000030317	-	72	36.085	Mandrillus_leucophaeus
WBGene00003063	lpd-7	79	48.624	ENSMAMG00000014668	pes	94	41.636	Mastacembelus_armatus
WBGene00003063	lpd-7	79	53.061	ENSMAUG00000018433	Pes1	76	50.998	Mesocricetus_auratus
WBGene00003063	lpd-7	81	50.776	ENSMICG00000010123	PES1	76	49.111	Microcebus_murinus
WBGene00003063	lpd-7	81	51.778	ENSMOCG00000021971	Pes1	76	50.893	Microtus_ochrogaster
WBGene00003063	lpd-7	79	46.604	ENSMMOG00000017812	pes	72	45.519	Mola_mola
WBGene00003063	lpd-7	79	51.724	ENSMODG00000009483	PES1	74	51.724	Monodelphis_domestica
WBGene00003063	lpd-7	79	50.000	ENSMALG00000012929	pes	94	42.468	Monopterus_albus
WBGene00003063	lpd-7	81	47.682	MGP_CAROLIEiJ_G0016021	Pes1	75	46.358	Mus_caroli
WBGene00003063	lpd-7	79	51.810	ENSMUSG00000020430	Pes1	77	49.890	Mus_musculus
WBGene00003063	lpd-7	81	66.667	MGP_PahariEiJ_G0016870	-	84	66.667	Mus_pahari
WBGene00003063	lpd-7	81	50.217	MGP_SPRETEiJ_G0016862	Pes1	78	48.913	Mus_spretus
WBGene00003063	lpd-7	79	52.273	ENSMPUG00000012950	PES1	84	46.535	Mustela_putorius_furo
WBGene00003063	lpd-7	81	51.441	ENSNGAG00000015282	Pes1	77	49.778	Nannospalax_galili
WBGene00003063	lpd-7	98	43.627	ENSNBRG00000006301	pes	94	43.173	Neolamprologus_brichardi
WBGene00003063	lpd-7	79	44.773	ENSNLEG00000003908	PES1	76	44.124	Nomascus_leucogenys
WBGene00003063	lpd-7	79	51.724	ENSMEUG00000011656	PES1	75	51.039	Notamacropus_eugenii
WBGene00003063	lpd-7	79	51.701	ENSOPRG00000000636	PES1	74	51.025	Ochotona_princeps
WBGene00003063	lpd-7	81	50.658	ENSODEG00000003187	PES1	77	49.559	Octodon_degus
WBGene00003063	lpd-7	79	50.569	ENSONIG00000013543	pes	74	49.087	Oreochromis_niloticus
WBGene00003063	lpd-7	79	50.794	ENSOCUG00000009658	PES1	75	50.569	Oryctolagus_cuniculus
WBGene00003063	lpd-7	99	43.113	ENSORLG00000007881	pes	94	42.565	Oryzias_latipes
WBGene00003063	lpd-7	79	49.087	ENSORLG00020000368	pes	75	47.936	Oryzias_latipes_hni
WBGene00003063	lpd-7	79	48.853	ENSORLG00015002220	pes	94	42.077	Oryzias_latipes_hsok
WBGene00003063	lpd-7	79	49.315	ENSOMEG00000002922	pes	93	42.776	Oryzias_melastigma
WBGene00003063	lpd-7	79	50.000	ENSOGAG00000005804	PES1	77	48.337	Otolemur_garnettii
WBGene00003063	lpd-7	79	43.256	ENSOARG00000008214	PES1	74	43.224	Ovis_aries
WBGene00003063	lpd-7	81	50.554	ENSPPAG00000029696	PES1	76	49.666	Pan_paniscus
WBGene00003063	lpd-7	79	52.500	ENSPPRG00000024146	PES1	74	51.025	Panthera_pardus
WBGene00003063	lpd-7	54	47.368	ENSPTIG00000021654	PES1	67	45.033	Panthera_tigris_altaica
WBGene00003063	lpd-7	81	50.776	ENSPTRG00000014251	PES1	76	50.554	Pan_troglodytes
WBGene00003063	lpd-7	80	39.189	ENSPTRG00000045557	-	79	37.783	Pan_troglodytes
WBGene00003063	lpd-7	79	51.364	ENSPANG00000009607	PES1	76	50.554	Papio_anubis
WBGene00003063	lpd-7	98	44.465	ENSPKIG00000024750	pes	93	43.948	Paramormyrops_kingsleyae
WBGene00003063	lpd-7	79	49.412	ENSPMGG00000019024	pes	74	48.471	Periophthalmus_magnuspinnatus
WBGene00003063	lpd-7	98	45.000	ENSPEMG00000012585	Pes1	79	49.455	Peromyscus_maniculatus_bairdii
WBGene00003063	lpd-7	79	51.701	ENSPCIG00000023994	PES1	75	51.025	Phascolarctos_cinereus
WBGene00003063	lpd-7	79	48.409	ENSPFOG00000014821	pes	94	41.530	Poecilia_formosa
WBGene00003063	lpd-7	79	48.592	ENSPLAG00000003811	pes	94	41.978	Poecilia_latipinna
WBGene00003063	lpd-7	79	49.061	ENSPMEG00000019878	pes	94	41.808	Poecilia_mexicana
WBGene00003063	lpd-7	79	48.946	ENSPREG00000022586	pes	94	41.231	Poecilia_reticulata
WBGene00003063	lpd-7	81	50.776	ENSPPYG00000011716	PES1	76	50.554	Pongo_abelii
WBGene00003063	lpd-7	67	47.745	ENSPCAG00000011542	PES1	58	48.696	Procavia_capensis
WBGene00003063	lpd-7	81	50.998	ENSPCOG00000016226	PES1	76	49.333	Propithecus_coquereli
WBGene00003063	lpd-7	79	50.113	ENSPNAG00000020800	pes	94	43.013	Pygocentrus_nattereri
WBGene00003063	lpd-7	81	51.656	ENSRNOG00000004515	Pes1	77	50.661	Rattus_norvegicus
WBGene00003063	lpd-7	82	36.281	ENSRBIG00000034572	-	78	35.177	Rhinopithecus_bieti
WBGene00003063	lpd-7	79	51.370	ENSRBIG00000040634	PES1	76	50.557	Rhinopithecus_bieti
WBGene00003063	lpd-7	79	51.370	ENSRROG00000028779	PES1	76	50.557	Rhinopithecus_roxellana
WBGene00003063	lpd-7	79	38.983	YGR103W	NOP7	94	35.924	Saccharomyces_cerevisiae
WBGene00003063	lpd-7	81	51.441	ENSSBOG00000026073	PES1	76	51.220	Saimiri_boliviensis_boliviensis
WBGene00003063	lpd-7	79	50.455	ENSSHAG00000002920	PES1	74	49.312	Sarcophilus_harrisii
WBGene00003063	lpd-7	80	50.000	ENSSFOG00015005010	pes1	77	49.095	Scleropages_formosus
WBGene00003063	lpd-7	79	49.087	ENSSMAG00000012102	pes	94	41.802	Scophthalmus_maximus
WBGene00003063	lpd-7	79	49.533	ENSSDUG00000013213	pes	75	48.712	Seriola_dumerili
WBGene00003063	lpd-7	79	49.296	ENSSLDG00000025373	pes	75	48.471	Seriola_lalandi_dorsalis
WBGene00003063	lpd-7	79	51.927	ENSSPUG00000018150	PES1	76	50.455	Sphenodon_punctatus
WBGene00003063	lpd-7	79	50.569	ENSSPAG00000018970	pes	74	49.428	Stegastes_partitus
WBGene00003063	lpd-7	79	51.020	ENSSSCG00000010010	PES1	73	50.569	Sus_scrofa
WBGene00003063	lpd-7	79	51.131	ENSTRUG00000015909	pes	75	50.342	Takifugu_rubripes
WBGene00003063	lpd-7	98	36.170	ENSTNIG00000015898	pes	94	34.909	Tetraodon_nigroviridis
WBGene00003063	lpd-7	81	50.670	ENSTBEG00000009825	PES1	77	49.441	Tupaia_belangeri
WBGene00003063	lpd-7	76	51.544	ENSTTRG00000001543	PES1	75	50.831	Tursiops_truncatus
WBGene00003063	lpd-7	79	51.818	ENSUAMG00000006854	PES1	74	51.025	Ursus_americanus
WBGene00003063	lpd-7	79	52.135	ENSUMAG00000016429	PES1	74	51.351	Ursus_maritimus
WBGene00003063	lpd-7	79	50.682	ENSVVUG00000002684	-	75	49.543	Vulpes_vulpes
WBGene00003063	lpd-7	79	49.660	ENSVVUG00000029961	-	75	48.519	Vulpes_vulpes
WBGene00003063	lpd-7	98	40.708	ENSXETG00000030097	PES1	75	45.330	Xenopus_tropicalis
WBGene00003063	lpd-7	79	50.000	ENSXCOG00000017009	pes	74	48.832	Xiphophorus_couchianus
WBGene00003063	lpd-7	79	50.000	ENSXMAG00000007708	pes	94	43.019	Xiphophorus_maculatus