EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00003073 (Gene tree)
Gene ID
-
Gene Symbol
lars-1
Alias
-
Full Name
Leucine--tRNA ligase
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
5283 bases
Position
chrIII:4181543-4186825
Accession
Q09996
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
R74tRNA-synt_1gPF09334.111.2e-1812
R74tRNA-synt_1gPF09334.111.2e-1822
R74tRNA-synt_1gPF09334.111.2e-1812
R74tRNA-synt_1gPF09334.111.2e-1822
R74Anticodon_1PF08264.134.9e-1811
R74Anticodon_1PF08264.134.9e-1811
R74tRNA-synt_1PF00133.227.6e-3912
R74tRNA-synt_1PF00133.227.6e-3922
R74tRNA-synt_1PF00133.227.6e-3912
R74tRNA-synt_1PF00133.227.6e-3922
R74tRNA-synt_1ePF01406.192.1e-0711
R74tRNA-synt_1ePF01406.192.1e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
R74.1.1-3771NM_065436R74.1.11186 (aa)NP_497837Q09996
R74.1.2-3743NM_065436R74.1.21186 (aa)NP_497837Q09996
Gene Model
Click here to download WBGene00003073's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00003073's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00003073lars-19956.334ENSG00000133706LARS9956.890Homo_sapiens
WBGene00003073lars-19955.946ENSAPOG00000010585larsb9957.307Acanthochromis_polyacanthus
WBGene00003073lars-19956.408ENSAMEG00000017584LARS9956.408Ailuropoda_melanoleuca
WBGene00003073lars-19954.240ENSACIG00000014026larsb9954.195Amphilophus_citrinellus
WBGene00003073lars-19955.369ENSAOCG00000016931larsb9955.369Amphiprion_ocellaris
WBGene00003073lars-19955.369ENSAPEG00000017720larsb9955.369Amphiprion_percula
WBGene00003073lars-19952.636ENSATEG00000010441larsb9952.636Anabas_testudineus
WBGene00003073lars-19656.856ENSAPLG00000008145LARS9956.856Anas_platyrhynchos
WBGene00003073lars-19954.866ENSACAG00000013916LARS9954.782Anolis_carolinensis
WBGene00003073lars-19259.130ENSANAG00000014375LARS9959.130Aotus_nancymaae
WBGene00003073lars-19955.612ENSACLG00000010881larsb9955.612Astatotilapia_calliptera
WBGene00003073lars-19955.649ENSAMXG00000019979larsb9955.481Astyanax_mexicanus
WBGene00003073lars-19955.490ENSBTAG00000006765LARS9955.490Bos_taurus
WBGene00003073lars-19956.588ENSCJAG00000021314LARS9957.155Callithrix_jacchus
WBGene00003073lars-19956.588ENSCAFG00000006431LARS9956.588Canis_familiaris
WBGene00003073lars-19956.588ENSCAFG00020025009LARS9956.588Canis_lupus_dingo
WBGene00003073lars-19955.659ENSCHIG00000014949LARS9955.659Capra_hircus
WBGene00003073lars-19956.334ENSTSYG00000001253LARS9956.334Carlito_syrichta
WBGene00003073lars-19644.746ENSCAPG00000015676LARS9744.746Cavia_aperea
WBGene00003073lars-19955.668ENSCPOG00000012329LARS9955.668Cavia_porcellus
WBGene00003073lars-19956.419ENSCCAG00000020789LARS9956.419Cebus_capucinus
WBGene00003073lars-19656.993ENSCATG00000033463LARS9956.802Cercocebus_atys
WBGene00003073lars-19956.166ENSCLAG00000011193LARS9956.166Chinchilla_lanigera
WBGene00003073lars-19856.496ENSCSAG00000012280LARS9656.496Chlorocebus_sabaeus
WBGene00003073lars-18957.240ENSCHOG00000009309LARS8957.240Choloepus_hoffmanni
WBGene00003073lars-19956.203ENSCPBG00000008415LARS9957.946Chrysemys_picta_bellii
WBGene00003073lars-19953.943ENSCING00000008535-9953.859Ciona_intestinalis
WBGene00003073lars-19955.330ENSCSAVG00000009040-9962.500Ciona_savignyi
WBGene00003073lars-19956.419ENSCANG00000031137LARS9956.419Colobus_angolensis_palliatus
WBGene00003073lars-19351.449ENSCGRG00001004647Lars9951.449Cricetulus_griseus_chok1gshd
WBGene00003073lars-19953.794ENSCGRG00000007284Lars9953.794Cricetulus_griseus_crigri
WBGene00003073lars-19954.858ENSCSEG00000014984larsb9954.858Cynoglossus_semilaevis
WBGene00003073lars-19955.378ENSCVAG00000014685larsb9955.378Cyprinodon_variegatus
WBGene00003073lars-16852.547ENSDARG00000019280larsb9952.547Danio_rerio
WBGene00003073lars-19656.408ENSDNOG00000017963LARS9956.321Dasypus_novemcinctus
WBGene00003073lars-19953.362ENSDORG00000014913Lars9953.362Dipodomys_ordii
WBGene00003073lars-19954.254FBgn0284253LeuRS9954.002Drosophila_melanogaster
WBGene00003073lars-19446.738ENSETEG00000003145LARS10046.738Echinops_telfairi
WBGene00003073lars-19151.374ENSEBUG00000014985larsb9651.374Eptatretus_burgeri
WBGene00003073lars-19956.588ENSEASG00005020569LARS9956.588Equus_asinus_asinus
WBGene00003073lars-19956.588ENSECAG00000008963LARS9958.378Equus_caballus
WBGene00003073lars-17362.931ENSEEUG00000014854LARS7265.517Erinaceus_europaeus
WBGene00003073lars-19955.781ENSELUG00000023311larsb9955.781Esox_lucius
WBGene00003073lars-19956.250ENSFCAG00000008715LARS9959.664Felis_catus
WBGene00003073lars-19956.203ENSFALG00000003209LARS9256.034Ficedula_albicollis
WBGene00003073lars-19955.912ENSFDAG00000020764LARS9955.912Fukomys_damarensis
WBGene00003073lars-19062.810ENSFHEG00000010437larsb9962.810Fundulus_heteroclitus
WBGene00003073lars-19954.461ENSGMOG00000013645larsb9954.798Gadus_morhua
WBGene00003073lars-19956.287ENSGALG00000007494LARS9956.118Gallus_gallus
WBGene00003073lars-19955.453ENSGAFG00000005029larsb9955.453Gambusia_affinis
WBGene00003073lars-19955.303ENSGACG00000020720larsb9955.303Gasterosteus_aculeatus
WBGene00003073lars-19955.724ENSGAGG00000002353LARS9955.724Gopherus_agassizii
WBGene00003073lars-19956.419ENSGGOG00000004103LARS9956.419Gorilla_gorilla
WBGene00003073lars-19955.461ENSHBUG00000003051larsb9957.966Haplochromis_burtoni
WBGene00003073lars-19955.574ENSHGLG00000006937LARS9955.574Heterocephalus_glaber_female
WBGene00003073lars-19955.574ENSHGLG00100002801LARS9955.574Heterocephalus_glaber_male
WBGene00003073lars-19955.537ENSHCOG00000003651larsb9955.537Hippocampus_comes
WBGene00003073lars-19955.236ENSIPUG00000010756lars9955.622Ictalurus_punctatus
WBGene00003073lars-19955.743ENSSTOG00000002356LARS9955.743Ictidomys_tridecemlineatus
WBGene00003073lars-19956.419ENSJJAG00000015265Lars9956.419Jaculus_jaculus
WBGene00003073lars-19955.490ENSKMAG00000009903larsb9955.323Kryptolebias_marmoratus
WBGene00003073lars-19955.658ENSLBEG00000025237larsb9955.490Labrus_bergylta
WBGene00003073lars-19955.902ENSLACG00000009321LARS9955.902Latimeria_chalumnae
WBGene00003073lars-19955.332ENSLOCG00000010442larsb9955.172Lepisosteus_oculatus
WBGene00003073lars-19955.593ENSLAFG00000000318LARS9955.593Loxodonta_africana
WBGene00003073lars-19956.250ENSMFAG00000038685LARS9956.496Macaca_fascicularis
WBGene00003073lars-19956.166ENSMMUG00000029787LARS9956.166Macaca_mulatta
WBGene00003073lars-19954.645ENSMNEG00000044014LARS9954.645Macaca_nemestrina
WBGene00003073lars-19956.166ENSMLEG00000037563LARS9956.166Mandrillus_leucophaeus
WBGene00003073lars-19955.034ENSMAMG00000021385larsb9955.034Mastacembelus_armatus
WBGene00003073lars-19955.631ENSMZEG00005002662larsb9955.631Maylandia_zebra
WBGene00003073lars-19656.856ENSMGAG00000009388LARS9956.681Meleagris_gallopavo
WBGene00003073lars-19948.014ENSMAUG00000003063Lars9947.675Mesocricetus_auratus
WBGene00003073lars-19956.334ENSMICG00000035589-9956.334Microcebus_murinus
WBGene00003073lars-19946.740ENSMICG00000035435-9946.740Microcebus_murinus
WBGene00003073lars-19955.396ENSMOCG00000002092Lars9955.396Microtus_ochrogaster
WBGene00003073lars-19953.704ENSMMOG00000013802larsb9953.704Mola_mola
WBGene00003073lars-19952.530ENSMODG00000010231LARS9952.530Monodelphis_domestica
WBGene00003073lars-19953.562ENSMALG00000018444larsb9953.562Monopterus_albus
WBGene00003073lars-19954.975MGP_CAROLIEiJ_G0022225Lars9954.975Mus_caroli
WBGene00003073lars-19955.000ENSMUSG00000024493Lars9955.000Mus_musculus
WBGene00003073lars-19954.975MGP_PahariEiJ_G0018958Lars9954.975Mus_pahari
WBGene00003073lars-19954.890MGP_SPRETEiJ_G0023135Lars9954.890Mus_spretus
WBGene00003073lars-19956.757ENSMPUG00000007844LARS9956.757Mustela_putorius_furo
WBGene00003073lars-19955.527ENSMLUG00000001125LARS9955.527Myotis_lucifugus
WBGene00003073lars-19955.912ENSNGAG00000011596Lars9955.743Nannospalax_galili
WBGene00003073lars-19955.461ENSNBRG00000005764larsb9955.565Neolamprologus_brichardi
WBGene00003073lars-19956.081ENSNLEG00000009816LARS9956.081Nomascus_leucogenys
WBGene00003073lars-17870.430ENSOPRG00000003076LARS8369.355Ochotona_princeps
WBGene00003073lars-19954.139ENSODEG00000004882LARS9954.139Octodon_degus
WBGene00003073lars-19955.621ENSONIG00000008493larsb9955.621Oreochromis_niloticus
WBGene00003073lars-19954.614ENSOANG00000005755LARS9954.774Ornithorhynchus_anatinus
WBGene00003073lars-19955.912ENSOCUG00000015684LARS9955.912Oryctolagus_cuniculus
WBGene00003073lars-19955.117ENSORLG00000001622larsb9955.117Oryzias_latipes
WBGene00003073lars-19954.950ENSORLG00020019950larsb9955.290Oryzias_latipes_hni
WBGene00003073lars-19955.034ENSORLG00015003895larsb9955.034Oryzias_latipes_hsok
WBGene00003073lars-19955.323ENSOMEG00000005677larsb9955.076Oryzias_melastigma
WBGene00003073lars-19655.469ENSOGAG00000008750LARS9955.469Otolemur_garnettii
WBGene00003073lars-19955.659ENSOARG00000015911-9955.659Ovis_aries
WBGene00003073lars-19955.696ENSOARG00000002454-9955.696Ovis_aries
WBGene00003073lars-19956.276ENSPPAG00000027964LARS9956.276Pan_paniscus
WBGene00003073lars-19956.166ENSPPRG00000023492LARS9956.166Panthera_pardus
WBGene00003073lars-19956.081ENSPTIG00000013110LARS9956.081Panthera_tigris_altaica
WBGene00003073lars-19956.419ENSPTRG00000017372LARS9956.419Pan_troglodytes
WBGene00003073lars-19956.081ENSPANG00000002663LARS9956.081Papio_anubis
WBGene00003073lars-19954.384ENSPKIG00000006650larsb9954.132Paramormyrops_kingsleyae
WBGene00003073lars-19955.190ENSPSIG00000015641LARS9955.190Pelodiscus_sinensis
WBGene00003073lars-16852.174ENSPMGG00000019556LARS9952.174Periophthalmus_magnuspinnatus
WBGene00003073lars-19952.867ENSPEMG00000010933Lars9953.035Peromyscus_maniculatus_bairdii
WBGene00003073lars-15143.535ENSPMAG00000005301larsb9943.535Petromyzon_marinus
WBGene00003073lars-19954.561ENSPCIG00000030572LARS9954.561Phascolarctos_cinereus
WBGene00003073lars-19955.453ENSPFOG00000002361larsb9955.453Poecilia_formosa
WBGene00003073lars-19955.537ENSPLAG00000016550larsb9955.537Poecilia_latipinna
WBGene00003073lars-19955.369ENSPMEG00000018422larsb9955.369Poecilia_mexicana
WBGene00003073lars-19955.621ENSPREG00000005668larsb9955.621Poecilia_reticulata
WBGene00003073lars-19954.798ENSPPYG00000015908LARS9754.983Pongo_abelii
WBGene00003073lars-18647.019ENSPCAG00000005621LARS9647.019Procavia_capensis
WBGene00003073lars-19955.405ENSPCOG00000019325LARS9955.405Propithecus_coquereli
WBGene00003073lars-19650.524ENSPVAG00000011237LARS9950.698Pteropus_vampyrus
WBGene00003073lars-19955.434ENSPNYG00000015254larsb9955.434Pundamilia_nyererei
WBGene00003073lars-19955.771ENSPNAG00000027191larsb9955.443Pygocentrus_nattereri
WBGene00003073lars-19955.312ENSRNOG00000018304Lars9955.312Rattus_norvegicus
WBGene00003073lars-19456.390ENSRBIG00000043198LARS9956.390Rhinopithecus_bieti
WBGene00003073lars-18445.428YPL160WCDC609145.428Saccharomyces_cerevisiae
WBGene00003073lars-19954.407ENSSBOG00000026661LARS9956.413Saimiri_boliviensis_boliviensis
WBGene00003073lars-19956.118ENSSHAG00000006084LARS9956.118Sarcophilus_harrisii
WBGene00003073lars-19557.293ENSSFOG00015018117larsb8957.293Scleropages_formosus
WBGene00003073lars-18759.182ENSSMAG00000004078larsb9759.182Scophthalmus_maximus
WBGene00003073lars-19955.369ENSSDUG00000021142larsb9955.369Seriola_dumerili
WBGene00003073lars-19955.369ENSSLDG00000007054larsb9955.369Seriola_lalandi_dorsalis
WBGene00003073lars-17460.432ENSSARG00000013481LARS7364.655Sorex_araneus
WBGene00003073lars-19955.882ENSSPUG00000013805LARS9955.882Sphenodon_punctatus
WBGene00003073lars-19955.369ENSSPAG00000012124larsb9955.369Stegastes_partitus
WBGene00003073lars-19954.223ENSSSCG00000014411LARS9954.244Sus_scrofa
WBGene00003073lars-19955.902ENSTGUG00000000092-9955.734Taeniopygia_guttata
WBGene00003073lars-19955.175ENSTRUG00000005358larsb9954.971Takifugu_rubripes
WBGene00003073lars-19952.867ENSTNIG00000018214larsb9952.698Tetraodon_nigroviridis
WBGene00003073lars-19070.124ENSTBEG00000003757LARS9370.124Tupaia_belangeri
WBGene00003073lars-18560.435ENSTTRG00000016712LARS8759.651Tursiops_truncatus
WBGene00003073lars-19458.289ENSUAMG00000019907LARS9958.289Ursus_americanus
WBGene00003073lars-19956.419ENSUMAG00000010585LARS9956.419Ursus_maritimus
WBGene00003073lars-19061.411ENSVPAG00000000557LARS9161.411Vicugna_pacos
WBGene00003073lars-19956.588ENSVVUG00000021124LARS9956.588Vulpes_vulpes
WBGene00003073lars-19956.071ENSXETG00000002320lars9956.071Xenopus_tropicalis
WBGene00003073lars-19955.574ENSXMAG00000001454larsb9955.117Xiphophorus_maculatus

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