EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00003389 (Gene tree)
Gene ID: -
Gene Symbol: mog-1
Alias: -
Full Name: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 4216 bases
Position: chrIII:9952056-9956271
Accession: P34498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K03H1	DEAD	PF00270.29	1.3e-06	1	1
K03H1	DEAD	PF00270.29	1.3e-06	1	1
K03H1	HA2	PF04408.23	7.6e-24	1	1
K03H1	HA2	PF04408.23	7.6e-24	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K03H1.2.2	-	3531	NM_066811	K03H1.2.2	1131 (aa)	NP_499212	P34498
K03H1.2.1	-	3587	NM_066811	K03H1.2.1	1131 (aa)	NP_499212	P34498

Gene Model

Click here to download WBGene00003389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00003389	mog-1	58	34.507	WBGene00020263	let-355	81	34.507
WBGene00003389	mog-1	57	49.615	WBGene00003392	mog-4	64	49.615
WBGene00003389	mog-1	69	47.739	WBGene00003393	mog-5	66	47.739
WBGene00003389	mog-1	56	41.107	WBGene00015525	rha-2	59	41.107
WBGene00003389	mog-1	57	44.578	WBGene00018967	ddx-15	90	45.741
WBGene00003389	mog-1	55	42.457	WBGene00022056	ddx-35	87	42.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003389	mog-1	88	60.624	ENSG00000140829	DHX38	96	61.111	Homo_sapiens
WBGene00003389	mog-1	97	55.186	ENSAPOG00000010788	dhx38	89	58.407	Acanthochromis_polyacanthus
WBGene00003389	mog-1	88	60.330	ENSAMEG00000002227	DHX38	86	58.770	Ailuropoda_melanoleuca
WBGene00003389	mog-1	89	60.551	ENSACIG00000000573	dhx38	90	57.766	Amphilophus_citrinellus
WBGene00003389	mog-1	79	53.378	ENSAOCG00000013483	-	88	57.189	Amphiprion_ocellaris
WBGene00003389	mog-1	97	56.276	ENSAOCG00000007610	dhx38	89	58.547	Amphiprion_ocellaris
WBGene00003389	mog-1	97	55.125	ENSAPEG00000011410	dhx38	89	58.414	Amphiprion_percula
WBGene00003389	mog-1	98	54.339	ENSATEG00000004692	dhx38	89	57.965	Anabas_testudineus
WBGene00003389	mog-1	83	62.423	ENSAPLG00000015279	DHX38	96	59.215	Anas_platyrhynchos
WBGene00003389	mog-1	85	57.030	ENSACAG00000008115	DHX38	87	54.902	Anolis_carolinensis
WBGene00003389	mog-1	88	60.624	ENSANAG00000022259	DHX38	87	59.225	Aotus_nancymaae
WBGene00003389	mog-1	99	52.922	ENSACLG00000001837	dhx38	89	55.066	Astatotilapia_calliptera
WBGene00003389	mog-1	92	58.442	ENSAMXG00000004396	dhx38	82	59.922	Astyanax_mexicanus
WBGene00003389	mog-1	88	60.370	ENSBTAG00000013265	DHX38	87	59.133	Bos_taurus
WBGene00003389	mog-1	87	61.166	ENSCJAG00000015103	DHX38	87	59.225	Callithrix_jacchus
WBGene00003389	mog-1	88	59.748	ENSCAFG00000020228	DHX38	87	58.889	Canis_familiaris
WBGene00003389	mog-1	88	59.651	ENSCAFG00020020392	DHX38	87	59.019	Canis_lupus_dingo
WBGene00003389	mog-1	88	60.291	ENSCHIG00000027105	DHX38	87	59.041	Capra_hircus
WBGene00003389	mog-1	88	61.485	ENSTSYG00000012023	DHX38	87	59.664	Carlito_syrichta
WBGene00003389	mog-1	89	59.885	ENSCAPG00000016032	DHX38	87	58.678	Cavia_aperea
WBGene00003389	mog-1	89	60.503	ENSCPOG00000013965	DHX38	86	59.259	Cavia_porcellus
WBGene00003389	mog-1	88	60.624	ENSCCAG00000031157	DHX38	87	59.225	Cebus_capucinus
WBGene00003389	mog-1	87	54.956	ENSCATG00000036889	DHX38	86	52.914	Cercocebus_atys
WBGene00003389	mog-1	89	60.832	ENSCLAG00000008250	DHX38	87	59.204	Chinchilla_lanigera
WBGene00003389	mog-1	88	60.624	ENSCSAG00000004218	DHX38	87	58.387	Chlorocebus_sabaeus
WBGene00003389	mog-1	51	75.258	ENSCHOG00000009444	-	97	68.079	Choloepus_hoffmanni
WBGene00003389	mog-1	85	62.386	ENSCPBG00000027010	DHX38	88	59.290	Chrysemys_picta_bellii
WBGene00003389	mog-1	99	58.772	ENSCING00000003597	-	99	58.239	Ciona_intestinalis
WBGene00003389	mog-1	99	55.749	ENSCSAVG00000001117	-	100	73.259	Ciona_savignyi
WBGene00003389	mog-1	88	60.526	ENSCANG00000039299	DHX38	83	60.742	Colobus_angolensis_palliatus
WBGene00003389	mog-1	87	61.166	ENSCGRG00001021542	Dhx38	87	59.317	Cricetulus_griseus_chok1gshd
WBGene00003389	mog-1	87	61.166	ENSCGRG00000017386	Dhx38	87	59.317	Cricetulus_griseus_crigri
WBGene00003389	mog-1	99	54.473	ENSCSEG00000008437	dhx38	90	57.354	Cynoglossus_semilaevis
WBGene00003389	mog-1	97	58.936	ENSCVAG00000023150	dhx38	90	58.588	Cyprinodon_variegatus
WBGene00003389	mog-1	99	54.213	ENSDARG00000100013	dhx38	91	57.526	Danio_rerio
WBGene00003389	mog-1	87	61.265	ENSDNOG00000006717	DHX38	87	59.259	Dasypus_novemcinctus
WBGene00003389	mog-1	87	61.166	ENSDORG00000005226	Dhx38	87	59.317	Dipodomys_ordii
WBGene00003389	mog-1	87	61.500	FBgn0026713	l(1)G0007	99	67.742	Drosophila_melanogaster
WBGene00003389	mog-1	52	78.005	ENSETEG00000014663	-	52	78.005	Echinops_telfairi
WBGene00003389	mog-1	96	55.640	ENSEBUG00000005875	dhx38	96	54.962	Eptatretus_burgeri
WBGene00003389	mog-1	88	60.253	ENSEASG00005013249	DHX38	89	58.981	Equus_asinus_asinus
WBGene00003389	mog-1	88	60.350	ENSECAG00000000526	DHX38	86	59.074	Equus_caballus
WBGene00003389	mog-1	99	52.068	ENSELUG00000014379	dhx38	90	54.251	Esox_lucius
WBGene00003389	mog-1	88	60.253	ENSFCAG00000005831	DHX38	87	58.981	Felis_catus
WBGene00003389	mog-1	86	61.972	ENSFALG00000002671	DHX38	88	57.668	Ficedula_albicollis
WBGene00003389	mog-1	88	60.819	ENSFDAG00000015601	DHX38	87	59.352	Fukomys_damarensis
WBGene00003389	mog-1	94	59.945	ENSFHEG00000006031	dhx38	98	56.820	Fundulus_heteroclitus
WBGene00003389	mog-1	98	54.935	ENSGMOG00000002840	dhx38	89	58.150	Gadus_morhua
WBGene00003389	mog-1	76	67.674	ENSGALG00000000787	DHX38	86	58.979	Gallus_gallus
WBGene00003389	mog-1	99	55.672	ENSGAFG00000017271	dhx38	90	58.050	Gambusia_affinis
WBGene00003389	mog-1	97	55.184	ENSGACG00000015776	dhx38	89	57.665	Gasterosteus_aculeatus
WBGene00003389	mog-1	85	62.285	ENSGAGG00000015601	DHX38	88	59.269	Gopherus_agassizii
WBGene00003389	mog-1	88	60.624	ENSGGOG00000013052	DHX38	87	59.225	Gorilla_gorilla
WBGene00003389	mog-1	89	60.417	ENSHBUG00000013363	dhx38	89	58.011	Haplochromis_burtoni
WBGene00003389	mog-1	87	61.715	ENSHGLG00000013308	DHX38	96	59.721	Heterocephalus_glaber_female
WBGene00003389	mog-1	87	60.718	ENSHGLG00100015625	DHX38	96	58.791	Heterocephalus_glaber_male
WBGene00003389	mog-1	99	55.150	ENSHCOG00000003102	dhx38	90	58.099	Hippocampus_comes
WBGene00003389	mog-1	92	60.204	ENSIPUG00000006233	DHX38	94	59.927	Ictalurus_punctatus
WBGene00003389	mog-1	87	61.166	ENSSTOG00000000534	DHX38	87	59.095	Ictidomys_tridecemlineatus
WBGene00003389	mog-1	80	70.014	ENSJJAG00000015149	Dhx38	85	70.014	Jaculus_jaculus
WBGene00003389	mog-1	97	57.826	ENSKMAG00000006694	dhx38	90	57.826	Kryptolebias_marmoratus
WBGene00003389	mog-1	97	55.749	ENSLBEG00000026364	dhx38	88	57.979	Labrus_bergylta
WBGene00003389	mog-1	87	58.020	ENSLACG00000013007	DHX38	96	53.339	Latimeria_chalumnae
WBGene00003389	mog-1	89	60.803	ENSLOCG00000004169	dhx38	80	62.167	Lepisosteus_oculatus
WBGene00003389	mog-1	88	60.857	ENSLAFG00000016360	DHX38	87	59.410	Loxodonta_africana
WBGene00003389	mog-1	88	60.624	ENSMFAG00000031852	DHX38	87	58.387	Macaca_fascicularis
WBGene00003389	mog-1	87	61.067	ENSMMUG00000000677	DHX38	87	58.295	Macaca_mulatta
WBGene00003389	mog-1	88	60.624	ENSMNEG00000045083	DHX38	87	58.387	Macaca_nemestrina
WBGene00003389	mog-1	88	60.624	ENSMLEG00000029417	DHX38	87	58.387	Mandrillus_leucophaeus
WBGene00003389	mog-1	90	60.623	ENSMAMG00000021512	dhx38	90	57.552	Mastacembelus_armatus
WBGene00003389	mog-1	89	57.905	ENSMZEG00005014283	dhx38	88	55.664	Maylandia_zebra
WBGene00003389	mog-1	86	61.348	ENSMGAG00000008791	DHX38	96	58.574	Meleagris_gallopavo
WBGene00003389	mog-1	87	61.029	ENSMAUG00000006330	Dhx38	98	61.029	Mesocricetus_auratus
WBGene00003389	mog-1	89	60.718	ENSMICG00000011402	DHX38	87	59.225	Microcebus_murinus
WBGene00003389	mog-1	84	62.408	ENSMOCG00000016798	Dhx38	86	58.846	Microtus_ochrogaster
WBGene00003389	mog-1	99	55.130	ENSMMOG00000016558	dhx38	90	57.143	Mola_mola
WBGene00003389	mog-1	88	60.802	ENSMODG00000002549	DHX38	87	58.813	Monodelphis_domestica
WBGene00003389	mog-1	94	57.737	ENSMALG00000021005	dhx38	90	57.589	Monopterus_albus
WBGene00003389	mog-1	87	60.968	MGP_CAROLIEiJ_G0031541	Dhx38	87	59.133	Mus_caroli
WBGene00003389	mog-1	87	61.067	ENSMUSG00000037993	Dhx38	87	59.225	Mus_musculus
WBGene00003389	mog-1	87	60.968	MGP_PahariEiJ_G0023141	Dhx38	87	59.225	Mus_pahari
WBGene00003389	mog-1	87	60.968	MGP_SPRETEiJ_G0032659	Dhx38	87	59.133	Mus_spretus
WBGene00003389	mog-1	88	60.039	ENSMPUG00000007766	DHX38	87	58.889	Mustela_putorius_furo
WBGene00003389	mog-1	88	60.603	ENSMLUG00000013866	DHX38	82	61.067	Myotis_lucifugus
WBGene00003389	mog-1	87	61.577	ENSNGAG00000014084	Dhx38	87	59.590	Nannospalax_galili
WBGene00003389	mog-1	91	57.836	ENSNBRG00000010899	dhx38	89	55.275	Neolamprologus_brichardi
WBGene00003389	mog-1	88	60.624	ENSNLEG00000005630	DHX38	87	59.225	Nomascus_leucogenys
WBGene00003389	mog-1	57	69.079	ENSMEUG00000007747	-	69	69.079	Notamacropus_eugenii
WBGene00003389	mog-1	87	60.771	ENSOPRG00000001884	DHX38	87	58.948	Ochotona_princeps
WBGene00003389	mog-1	94	54.403	ENSOPRG00000012142	-	87	56.007	Ochotona_princeps
WBGene00003389	mog-1	87	61.515	ENSODEG00000015472	DHX38	87	59.129	Octodon_degus
WBGene00003389	mog-1	89	60.684	ENSONIG00000005916	dhx38	83	60.664	Oreochromis_niloticus
WBGene00003389	mog-1	88	60.964	ENSOCUG00000009067	DHX38	88	59.078	Oryctolagus_cuniculus
WBGene00003389	mog-1	97	55.755	ENSORLG00000007853	dhx38	79	62.763	Oryzias_latipes
WBGene00003389	mog-1	97	55.673	ENSORLG00020009844	dhx38	89	58.208	Oryzias_latipes_hni
WBGene00003389	mog-1	97	55.673	ENSORLG00015007999	dhx38	89	58.208	Oryzias_latipes_hsok
WBGene00003389	mog-1	89	61.377	ENSOMEG00000001782	dhx38	89	58.348	Oryzias_melastigma
WBGene00003389	mog-1	89	61.035	ENSOGAG00000008658	DHX38	87	59.553	Otolemur_garnettii
WBGene00003389	mog-1	88	58.350	ENSOARG00000003723	DHX38	87	57.130	Ovis_aries
WBGene00003389	mog-1	88	60.624	ENSPPAG00000042488	DHX38	87	59.225	Pan_paniscus
WBGene00003389	mog-1	88	60.253	ENSPPRG00000008930	DHX38	87	58.981	Panthera_pardus
WBGene00003389	mog-1	88	60.253	ENSPTIG00000017274	DHX38	87	58.981	Panthera_tigris_altaica
WBGene00003389	mog-1	87	61.166	ENSPTRG00000008338	DHX38	87	59.225	Pan_troglodytes
WBGene00003389	mog-1	88	60.624	ENSPANG00000022057	DHX38	87	58.387	Papio_anubis
WBGene00003389	mog-1	90	60.985	ENSPKIG00000009708	dhx38	91	57.785	Paramormyrops_kingsleyae
WBGene00003389	mog-1	93	58.570	ENSPMGG00000006063	dhx38	88	57.309	Periophthalmus_magnuspinnatus
WBGene00003389	mog-1	87	61.067	ENSPEMG00000008011	Dhx38	87	58.834	Peromyscus_maniculatus_bairdii
WBGene00003389	mog-1	90	59.924	ENSPCIG00000001712	DHX38	88	58.688	Phascolarctos_cinereus
WBGene00003389	mog-1	97	57.513	ENSPFOG00000001246	dhx38	90	57.686	Poecilia_formosa
WBGene00003389	mog-1	97	57.963	ENSPLAG00000004022	dhx38	90	58.138	Poecilia_latipinna
WBGene00003389	mog-1	97	57.876	ENSPMEG00000015475	dhx38	90	57.876	Poecilia_mexicana
WBGene00003389	mog-1	94	59.729	ENSPREG00000023207	dhx38	90	58.144	Poecilia_reticulata
WBGene00003389	mog-1	88	60.511	ENSPPYG00000007515	DHX38	81	61.056	Pongo_abelii
WBGene00003389	mog-1	67	69.921	ENSPCAG00000010592	DHX38	68	65.492	Procavia_capensis
WBGene00003389	mog-1	89	60.815	ENSPCOG00000027770	DHX38	87	59.352	Propithecus_coquereli
WBGene00003389	mog-1	88	60.350	ENSPVAG00000010259	DHX38	93	59.167	Pteropus_vampyrus
WBGene00003389	mog-1	99	54.619	ENSPNYG00000013335	dhx38	89	57.143	Pundamilia_nyererei
WBGene00003389	mog-1	95	57.473	ENSPNAG00000004859	dhx38	90	56.661	Pygocentrus_nattereri
WBGene00003389	mog-1	87	61.067	ENSRNOG00000014619	Dhx38	87	58.818	Rattus_norvegicus
WBGene00003389	mog-1	88	60.624	ENSRBIG00000025475	DHX38	91	58.387	Rhinopithecus_bieti
WBGene00003389	mog-1	88	60.624	ENSRROG00000028630	DHX38	87	58.387	Rhinopithecus_roxellana
WBGene00003389	mog-1	66	51.344	YKR086W	PRP16	71	51.344	Saccharomyces_cerevisiae
WBGene00003389	mog-1	88	60.624	ENSSBOG00000021842	DHX38	87	59.225	Saimiri_boliviensis_boliviensis
WBGene00003389	mog-1	80	58.262	ENSSHAG00000016871	DHX38	88	52.823	Sarcophilus_harrisii
WBGene00003389	mog-1	88	61.132	ENSSFOG00015014930	dhx38	88	58.761	Scleropages_formosus
WBGene00003389	mog-1	95	58.429	ENSSMAG00000000095	dhx38	88	58.474	Scophthalmus_maximus
WBGene00003389	mog-1	95	58.596	ENSSDUG00000001413	dhx38	90	57.885	Seriola_dumerili
WBGene00003389	mog-1	95	55.266	ENSSLDG00000021050	dhx38	88	55.266	Seriola_lalandi_dorsalis
WBGene00003389	mog-1	97	55.841	ENSSPAG00000020537	dhx38	88	58.333	Stegastes_partitus
WBGene00003389	mog-1	87	70.348	ENSSSCG00000002748	DHX38	81	70.348	Sus_scrofa
WBGene00003389	mog-1	88	58.624	ENSTGUG00000008196	DHX38	88	56.261	Taeniopygia_guttata
WBGene00003389	mog-1	97	55.229	ENSTRUG00000017588	dhx38	89	58.593	Takifugu_rubripes
WBGene00003389	mog-1	91	60.354	ENSTNIG00000009345	dhx38	83	61.621	Tetraodon_nigroviridis
WBGene00003389	mog-1	81	54.849	ENSTBEG00000001426	DHX38	86	50.727	Tupaia_belangeri
WBGene00003389	mog-1	85	61.477	ENSTTRG00000001914	DHX38	84	59.585	Tursiops_truncatus
WBGene00003389	mog-1	88	60.253	ENSUAMG00000020435	DHX38	87	58.694	Ursus_americanus
WBGene00003389	mog-1	88	60.136	ENSUMAG00000018189	DHX38	96	56.368	Ursus_maritimus
WBGene00003389	mog-1	88	59.748	ENSVVUG00000017474	DHX38	87	58.889	Vulpes_vulpes
WBGene00003389	mog-1	92	60.788	ENSXETG00000023447	dhx38	83	63.221	Xenopus_tropicalis
WBGene00003389	mog-1	97	58.772	ENSXCOG00000011321	dhx38	90	58.509	Xiphophorus_couchianus
WBGene00003389	mog-1	97	58.312	ENSXMAG00000003292	dhx38	90	58.138	Xiphophorus_maculatus