EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003415 (Gene tree)
Gene ID: -
Gene Symbol: mars-1
Alias: -
Full Name: Methionine--tRNA ligase%2C cytoplasmic
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3547 bases
Position: chrIV:11631941-11635487
Accession: Q20970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F58B3	tRNA-synt_1g	PF09334.11	1.1e-147	1	1
F58B3	tRNA-synt_1g	PF09334.11	2.2e-147	1	1
F58B3	Anticodon_1	PF08264.13	2.5e-06	1	1
F58B3	Anticodon_1	PF08264.13	4.2e-06	1	1
F58B3	tRNA_bind	PF01588.20	6e-33	1	1
F58B3	tRNA_bind	PF01588.20	3.8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F58B3.5a	-	2995	NM_001268641	F58B3.5a	917 (aa)	NP_001255570	Q20970
F58B3.5c	-	1124	NM_001268642	F58B3.5c	294 (aa)	NP_001255571	D3YT56
F58B3.5b	-	2046	NM_001268643	F58B3.5b	676 (aa)	NP_001255572	D3YT55

Gene Model

Click here to download WBGene00003415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003415	mars-1	91	57.853	ENSG00000166986	MARS	99	50.617	Homo_sapiens
WBGene00003415	mars-1	86	58.163	ENSAPOG00000020238	mars	71	55.115	Acanthochromis_polyacanthus
WBGene00003415	mars-1	86	59.622	ENSAMEG00000004962	MARS	65	59.022	Ailuropoda_melanoleuca
WBGene00003415	mars-1	91	55.255	ENSACIG00000016271	mars	76	55.255	Amphilophus_citrinellus
WBGene00003415	mars-1	86	58.844	ENSAOCG00000011411	mars	71	55.725	Amphiprion_ocellaris
WBGene00003415	mars-1	86	58.844	ENSAPEG00000008610	mars	75	53.604	Amphiprion_percula
WBGene00003415	mars-1	87	58.615	ENSATEG00000025019	mars	71	54.692	Anabas_testudineus
WBGene00003415	mars-1	86	58.966	ENSAPLG00000014821	MARS	77	54.545	Anas_platyrhynchos
WBGene00003415	mars-1	87	58.305	ENSACAG00000006698	MARS	72	54.230	Anolis_carolinensis
WBGene00003415	mars-1	88	59.328	ENSANAG00000027589	MARS	72	55.589	Aotus_nancymaae
WBGene00003415	mars-1	86	57.993	ENSACLG00000018937	mars	72	54.383	Astatotilapia_calliptera
WBGene00003415	mars-1	87	58.615	ENSAMXG00000017335	mars	70	57.596	Astyanax_mexicanus
WBGene00003415	mars-1	88	58.893	ENSBTAG00000018405	MARS	65	59.122	Bos_taurus
WBGene00003415	mars-1	87	59.528	ENSCJAG00000007249	MARS	71	56.522	Callithrix_jacchus
WBGene00003415	mars-1	86	59.520	ENSCAFG00000000229	MARS	71	55.988	Canis_familiaris
WBGene00003415	mars-1	86	59.520	ENSCAFG00020023661	MARS	71	55.988	Canis_lupus_dingo
WBGene00003415	mars-1	91	57.351	ENSCHIG00000027023	MARS	70	56.338	Capra_hircus
WBGene00003415	mars-1	86	58.935	ENSTSYG00000005193	MARS	71	55.280	Carlito_syrichta
WBGene00003415	mars-1	80	61.029	ENSCAPG00000014448	MARS	73	61.029	Cavia_aperea
WBGene00003415	mars-1	88	59.432	ENSCPOG00000012866	MARS	72	55.389	Cavia_porcellus
WBGene00003415	mars-1	88	58.557	ENSCCAG00000032206	MARS	81	56.056	Cebus_capucinus
WBGene00003415	mars-1	88	59.160	ENSCATG00000038907	MARS	72	55.136	Cercocebus_atys
WBGene00003415	mars-1	87	58.853	ENSCLAG00000012164	MARS	73	56.211	Chinchilla_lanigera
WBGene00003415	mars-1	87	58.264	ENSCSAG00000004852	MARS	65	58.264	Chlorocebus_sabaeus
WBGene00003415	mars-1	87	58.065	ENSCPBG00000017136	MARS	71	55.433	Chrysemys_picta_bellii
WBGene00003415	mars-1	85	58.783	ENSCING00000018550	-	86	58.783	Ciona_intestinalis
WBGene00003415	mars-1	85	57.068	ENSCSAVG00000006145	-	98	57.068	Ciona_savignyi
WBGene00003415	mars-1	88	59.160	ENSCANG00000034583	MARS	65	59.160	Colobus_angolensis_palliatus
WBGene00003415	mars-1	88	59.631	ENSCGRG00001019238	Mars	71	56.589	Cricetulus_griseus_chok1gshd
WBGene00003415	mars-1	88	59.631	ENSCGRG00000017321	Mars	71	56.589	Cricetulus_griseus_crigri
WBGene00003415	mars-1	85	58.176	ENSCSEG00000010816	mars	72	54.123	Cynoglossus_semilaevis
WBGene00003415	mars-1	86	59.005	ENSCVAG00000009314	mars	70	55.538	Cyprinodon_variegatus
WBGene00003415	mars-1	87	59.052	ENSDARG00000034396	mars	70	55.322	Danio_rerio
WBGene00003415	mars-1	88	57.789	ENSDNOG00000017502	MARS	72	53.997	Dasypus_novemcinctus
WBGene00003415	mars-1	88	58.459	ENSDORG00000007127	Mars	65	58.459	Dipodomys_ordii
WBGene00003415	mars-1	90	51.290	FBgn0034401	MetRS	60	51.290	Drosophila_melanogaster
WBGene00003415	mars-1	69	54.989	ENSETEG00000007106	MARS	87	54.989	Echinops_telfairi
WBGene00003415	mars-1	80	51.099	ENSEBUG00000010439	mars	87	51.099	Eptatretus_burgeri
WBGene00003415	mars-1	87	59.259	ENSEASG00005007208	MARS	69	57.211	Equus_asinus_asinus
WBGene00003415	mars-1	94	56.426	ENSECAG00000015175	MARS	69	57.211	Equus_caballus
WBGene00003415	mars-1	68	59.389	ENSEEUG00000015503	MARS	50	59.389	Erinaceus_europaeus
WBGene00003415	mars-1	88	57.525	ENSELUG00000010453	mars	69	56.000	Esox_lucius
WBGene00003415	mars-1	87	58.923	ENSFCAG00000002083	MARS	71	55.969	Felis_catus
WBGene00003415	mars-1	88	59.396	ENSFDAG00000010217	MARS	73	56.589	Fukomys_damarensis
WBGene00003415	mars-1	85	59.516	ENSFHEG00000016374	mars	71	55.287	Fundulus_heteroclitus
WBGene00003415	mars-1	90	57.561	ENSGMOG00000007987	mars	68	57.561	Gadus_morhua
WBGene00003415	mars-1	86	57.653	ENSGALG00000039315	MARS	67	55.779	Gallus_gallus
WBGene00003415	mars-1	90	56.911	ENSGAFG00000013461	mars	69	56.911	Gambusia_affinis
WBGene00003415	mars-1	91	55.696	ENSGACG00000006474	mars	72	53.982	Gasterosteus_aculeatus
WBGene00003415	mars-1	85	59.304	ENSGAGG00000011640	MARS	72	54.809	Gopherus_agassizii
WBGene00003415	mars-1	91	57.532	ENSGGOG00000001982	MARS	67	59.664	Gorilla_gorilla
WBGene00003415	mars-1	84	53.859	ENSHBUG00000009575	mars	70	52.581	Haplochromis_burtoni
WBGene00003415	mars-1	87	49.241	ENSHGLG00000019739	-	63	49.241	Heterocephalus_glaber_female
WBGene00003415	mars-1	88	59.732	ENSHGLG00000013493	MARS	66	59.468	Heterocephalus_glaber_female
WBGene00003415	mars-1	87	48.485	ENSHGLG00100004906	-	63	48.485	Heterocephalus_glaber_male
WBGene00003415	mars-1	88	59.732	ENSHGLG00100006885	MARS	66	59.468	Heterocephalus_glaber_male
WBGene00003415	mars-1	88	57.571	ENSHCOG00000001090	mars	65	57.571	Hippocampus_comes
WBGene00003415	mars-1	86	57.509	ENSIPUG00000024410	mars	69	57.509	Ictalurus_punctatus
WBGene00003415	mars-1	88	56.616	ENSIPUG00000024413	mars	98	56.616	Ictalurus_punctatus
WBGene00003415	mars-1	87	58.685	ENSSTOG00000001128	MARS	71	55.745	Ictidomys_tridecemlineatus
WBGene00003415	mars-1	88	58.557	ENSJJAG00000018827	Mars	71	55.745	Jaculus_jaculus
WBGene00003415	mars-1	85	58.824	ENSKMAG00000012408	mars	69	58.824	Kryptolebias_marmoratus
WBGene00003415	mars-1	85	57.931	ENSLBEG00000013609	mars	71	54.364	Labrus_bergylta
WBGene00003415	mars-1	91	57.258	ENSLACG00000018854	MARS	73	54.519	Latimeria_chalumnae
WBGene00003415	mars-1	87	58.586	ENSLAFG00000013525	MARS	65	58.784	Loxodonta_africana
WBGene00003415	mars-1	88	58.725	ENSMFAG00000010123	MARS	71	56.056	Macaca_fascicularis
WBGene00003415	mars-1	87	59.191	ENSMMUG00000011277	MARS	88	52.941	Macaca_mulatta
WBGene00003415	mars-1	88	58.487	ENSMNEG00000044464	MARS	65	58.487	Macaca_nemestrina
WBGene00003415	mars-1	77	67.769	ENSMLEG00000034638	MARS	71	67.769	Mandrillus_leucophaeus
WBGene00003415	mars-1	88	58.824	ENSMAMG00000010012	mars	69	59.655	Mastacembelus_armatus
WBGene00003415	mars-1	86	58.319	ENSMZEG00005007092	mars	72	54.737	Maylandia_zebra
WBGene00003415	mars-1	91	57.835	ENSMAUG00000011482	Mars	72	56.808	Mesocricetus_auratus
WBGene00003415	mars-1	87	58.853	ENSMICG00000032056	MARS	65	58.853	Microcebus_murinus
WBGene00003415	mars-1	87	59.428	ENSMOCG00000010941	Mars	65	59.428	Microtus_ochrogaster
WBGene00003415	mars-1	84	58.988	ENSMMOG00000007461	mars	66	57.023	Mola_mola
WBGene00003415	mars-1	87	57.718	ENSMALG00000010005	mars	71	57.718	Monopterus_albus
WBGene00003415	mars-1	89	57.781	MGP_CAROLIEiJ_G0015891	Mars	73	54.167	Mus_caroli
WBGene00003415	mars-1	89	57.947	ENSMUSG00000040354	Mars	73	54.247	Mus_musculus
WBGene00003415	mars-1	89	57.947	MGP_PahariEiJ_G0031194	Mars	72	54.463	Mus_pahari
WBGene00003415	mars-1	89	57.781	MGP_SPRETEiJ_G0016717	Mars	73	54.098	Mus_spretus
WBGene00003415	mars-1	87	58.983	ENSMPUG00000001831	MARS	65	58.754	Mustela_putorius_furo
WBGene00003415	mars-1	89	57.546	ENSMLUG00000001037	MARS	71	55.452	Myotis_lucifugus
WBGene00003415	mars-1	87	58.754	ENSNGAG00000018824	Mars	65	58.754	Nannospalax_galili
WBGene00003415	mars-1	85	57.071	ENSNBRG00000004105	mars	78	53.245	Neolamprologus_brichardi
WBGene00003415	mars-1	91	57.212	ENSNLEG00000017297	MARS	69	57.212	Nomascus_leucogenys
WBGene00003415	mars-1	91	57.005	ENSMEUG00000007195	MARS	77	56.201	Notamacropus_eugenii
WBGene00003415	mars-1	87	57.313	ENSOPRG00000006518	MARS	68	55.935	Ochotona_princeps
WBGene00003415	mars-1	87	59.459	ENSODEG00000001752	MARS	69	57.211	Octodon_degus
WBGene00003415	mars-1	85	58.247	ENSONIG00000005090	mars	73	52.457	Oreochromis_niloticus
WBGene00003415	mars-1	60	67.246	ENSOANG00000013318	MARS	65	63.869	Ornithorhynchus_anatinus
WBGene00003415	mars-1	88	58.070	ENSOCUG00000007373	MARS	66	58.389	Oryctolagus_cuniculus
WBGene00003415	mars-1	85	59.138	ENSORLG00000005405	mars	71	55.556	Oryzias_latipes
WBGene00003415	mars-1	85	59.138	ENSORLG00020017397	mars	71	55.556	Oryzias_latipes_hni
WBGene00003415	mars-1	85	59.483	ENSORLG00015012976	mars	71	55.860	Oryzias_latipes_hsok
WBGene00003415	mars-1	86	58.673	ENSOMEG00000018411	mars	75	55.860	Oryzias_melastigma
WBGene00003415	mars-1	88	57.930	ENSOGAG00000005226	MARS	72	54.042	Otolemur_garnettii
WBGene00003415	mars-1	91	57.351	ENSOARG00000006477	MARS	70	56.338	Ovis_aries
WBGene00003415	mars-1	88	59.296	ENSPPAG00000025147	MARS	72	55.287	Pan_paniscus
WBGene00003415	mars-1	87	58.923	ENSPPRG00000023243	MARS	71	55.969	Panthera_pardus
WBGene00003415	mars-1	87	58.923	ENSPTIG00000006721	MARS	65	58.923	Panthera_tigris_altaica
WBGene00003415	mars-1	91	57.532	ENSPTRG00000005135	MARS	69	57.532	Pan_troglodytes
WBGene00003415	mars-1	88	59.160	ENSPANG00000009140	MARS	72	55.136	Papio_anubis
WBGene00003415	mars-1	89	58.717	ENSPKIG00000002833	mars	72	54.925	Paramormyrops_kingsleyae
WBGene00003415	mars-1	65	45.361	ENSPSIG00000013607	MARS	64	37.478	Pelodiscus_sinensis
WBGene00003415	mars-1	85	59.689	ENSPMGG00000014847	mars	72	54.858	Periophthalmus_magnuspinnatus
WBGene00003415	mars-1	86	59.215	ENSPEMG00000000046	Mars	69	56.182	Peromyscus_maniculatus_bairdii
WBGene00003415	mars-1	88	58.403	ENSPCIG00000023765	MARS	72	55.120	Phascolarctos_cinereus
WBGene00003415	mars-1	86	58.834	ENSPFOG00000006998	mars	71	55.136	Poecilia_formosa
WBGene00003415	mars-1	86	58.662	ENSPLAG00000017870	mars	71	54.985	Poecilia_latipinna
WBGene00003415	mars-1	90	57.073	ENSPMEG00000008197	mars	73	55.303	Poecilia_mexicana
WBGene00003415	mars-1	87	58.545	ENSPREG00000008123	mars	71	58.446	Poecilia_reticulata
WBGene00003415	mars-1	91	57.051	ENSPPYG00000004691	MARS	69	57.051	Pongo_abelii
WBGene00003415	mars-1	87	58.586	ENSPCAG00000016037	MARS	68	58.586	Procavia_capensis
WBGene00003415	mars-1	87	58.784	ENSPCOG00000017598	MARS	65	58.784	Propithecus_coquereli
WBGene00003415	mars-1	86	57.993	ENSPNYG00000013809	mars	74	54.341	Pundamilia_nyererei
WBGene00003415	mars-1	91	55.869	ENSPNAG00000017290	mars	72	54.519	Pygocentrus_nattereri
WBGene00003415	mars-1	87	59.022	ENSRNOG00000025459	Mars	65	59.022	Rattus_norvegicus
WBGene00003415	mars-1	88	58.893	ENSRBIG00000044782	MARS	71	56.211	Rhinopithecus_bieti
WBGene00003415	mars-1	88	58.893	ENSRROG00000042331	MARS	72	55.136	Rhinopithecus_roxellana
WBGene00003415	mars-1	85	51.038	YGR264C	MES1	76	51.038	Saccharomyces_cerevisiae
WBGene00003415	mars-1	88	55.872	ENSSBOG00000022875	MARS	70	53.571	Saimiri_boliviensis_boliviensis
WBGene00003415	mars-1	91	57.327	ENSSHAG00000007182	MARS	68	57.327	Sarcophilus_harrisii
WBGene00003415	mars-1	86	59.829	ENSSFOG00015011038	mars	68	59.829	Scleropages_formosus
WBGene00003415	mars-1	89	57.990	ENSSMAG00000012409	mars	74	55.470	Scophthalmus_maximus
WBGene00003415	mars-1	85	59.107	ENSSDUG00000019070	mars	72	54.925	Seriola_dumerili
WBGene00003415	mars-1	85	59.107	ENSSLDG00000005561	mars	66	59.107	Seriola_lalandi_dorsalis
WBGene00003415	mars-1	74	67.544	ENSSARG00000002477	MARS	59	68.595	Sorex_araneus
WBGene00003415	mars-1	74	60.757	ENSSPUG00000007756	MARS	64	61.680	Sphenodon_punctatus
WBGene00003415	mars-1	87	58.151	ENSSPAG00000022691	mars	72	54.887	Stegastes_partitus
WBGene00003415	mars-1	88	58.389	ENSSSCG00000023318	MARS	67	55.435	Sus_scrofa
WBGene00003415	mars-1	84	59.194	ENSTRUG00000014774	mars	71	54.766	Takifugu_rubripes
WBGene00003415	mars-1	87	57.797	ENSTNIG00000007060	mars	72	53.502	Tetraodon_nigroviridis
WBGene00003415	mars-1	77	52.008	ENSTBEG00000000303	MARS	68	60.140	Tupaia_belangeri
WBGene00003415	mars-1	87	58.853	ENSTTRG00000013088	MARS	65	58.853	Tursiops_truncatus
WBGene00003415	mars-1	87	58.913	ENSUMAG00000019826	MARS	71	55.745	Ursus_maritimus
WBGene00003415	mars-1	87	58.644	ENSVVUG00000017940	MARS	71	55.521	Vulpes_vulpes
WBGene00003415	mars-1	81	56.159	ENSXETG00000025174	mars	96	53.547	Xenopus_tropicalis
WBGene00003415	mars-1	86	58.662	ENSXCOG00000013878	mars	65	58.206	Xiphophorus_couchianus
WBGene00003415	mars-1	86	58.662	ENSXMAG00000017920	mars	71	54.985	Xiphophorus_maculatus