EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003596 (Gene tree)
Gene ID: -
Gene Symbol: ngp-1
Alias: -
Full Name: Nucleolar GTP-binding protein 2
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3899 bases
Position: chrI:8394728-8398626
Accession: Q9U365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T19A6	MMR_HSR1	PF01926.23	1.2e-15	1	1
T19A6	MMR_HSR1	PF01926.23	1.2e-15	1	1
T19A6	MMR_HSR1	PF01926.23	1.2e-15	1	1
T19A6	MMR_HSR1	PF01926.23	1.4e-15	1	1
T19A6	MMR_HSR1	PF01926.23	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T19A6.2a	-	2152	NM_059874	T19A6.2a	651 (aa)	NP_492275	Q9U365
T19A6.2c	-	2020	NM_001026450	T19A6.2c	610 (aa)	NP_001021621	Q56VZ2
T19A6.2b.3	-	2030	NM_059875	T19A6.2b.3	592 (aa)	NP_492276	Q9U365
T19A6.2b.2	-	2168	NM_059875	T19A6.2b.2	592 (aa)	NP_492276	Q9U365
T19A6.2b.1	-	2146	NM_059875	T19A6.2b.1	592 (aa)	NP_492276	Q9U365

Gene Model

Click here to download WBGene00003596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003596	ngp-1	88	52.390	ENSG00000134697	GNL2	70	73.256	Homo_sapiens
WBGene00003596	ngp-1	77	54.468	ENSAPOG00000024507	gnl2	70	53.814	Acanthochromis_polyacanthus
WBGene00003596	ngp-1	76	57.143	ENSAMEG00000001032	GNL2	66	55.441	Ailuropoda_melanoleuca
WBGene00003596	ngp-1	73	57.143	ENSACIG00000018346	gnl2	64	55.983	Amphilophus_citrinellus
WBGene00003596	ngp-1	85	50.787	ENSAOCG00000014396	gnl2	66	55.748	Amphiprion_ocellaris
WBGene00003596	ngp-1	80	53.252	ENSAPEG00000005375	gnl2	63	55.748	Amphiprion_percula
WBGene00003596	ngp-1	73	56.278	ENSATEG00000009311	gnl2	66	55.531	Anabas_testudineus
WBGene00003596	ngp-1	76	57.325	ENSAPLG00000006508	GNL2	65	57.325	Anas_platyrhynchos
WBGene00003596	ngp-1	75	56.833	ENSACAG00000017224	GNL2	64	56.833	Anolis_carolinensis
WBGene00003596	ngp-1	88	52.206	ENSANAG00000023449	GNL2	63	56.930	Aotus_nancymaae
WBGene00003596	ngp-1	77	53.503	ENSAMXG00000020288	gnl2	70	54.037	Astyanax_mexicanus
WBGene00003596	ngp-1	75	57.019	ENSBTAG00000003849	GNL2	67	54.970	Bos_taurus
WBGene00003596	ngp-1	88	52.022	ENSCJAG00000001980	GNL2	64	56.930	Callithrix_jacchus
WBGene00003596	ngp-1	80	55.193	ENSCAFG00000003289	GNL2	66	55.647	Canis_familiaris
WBGene00003596	ngp-1	80	55.193	ENSCAFG00020008050	GNL2	67	55.647	Canis_lupus_dingo
WBGene00003596	ngp-1	85	50.095	ENSCHIG00000015731	GNL2	67	55.375	Capra_hircus
WBGene00003596	ngp-1	76	57.143	ENSTSYG00000004537	GNL2	64	57.143	Carlito_syrichta
WBGene00003596	ngp-1	73	47.439	ENSCAPG00000017481	GNL2	63	47.727	Cavia_aperea
WBGene00003596	ngp-1	72	57.919	ENSCPOG00000026804	GNL2	62	57.919	Cavia_porcellus
WBGene00003596	ngp-1	88	52.390	ENSCCAG00000034952	GNL2	64	56.838	Cebus_capucinus
WBGene00003596	ngp-1	88	52.757	ENSCATG00000026503	GNL2	63	57.356	Cercocebus_atys
WBGene00003596	ngp-1	76	57.143	ENSCLAG00000012504	GNL2	63	57.143	Chinchilla_lanigera
WBGene00003596	ngp-1	88	52.495	ENSCSAG00000001110	GNL2	63	57.356	Chlorocebus_sabaeus
WBGene00003596	ngp-1	76	55.650	ENSCPBG00000018483	GNL2	64	55.650	Chrysemys_picta_bellii
WBGene00003596	ngp-1	75	59.101	ENSCING00000010696	-	87	59.023	Ciona_intestinalis
WBGene00003596	ngp-1	75	51.398	ENSCSAVG00000001583	-	69	49.068	Ciona_savignyi
WBGene00003596	ngp-1	88	49.908	ENSCANG00000036748	GNL2	63	54.371	Colobus_angolensis_palliatus
WBGene00003596	ngp-1	84	53.578	ENSCGRG00001016733	Gnl2	64	56.716	Cricetulus_griseus_chok1gshd
WBGene00003596	ngp-1	84	53.578	ENSCGRG00000017418	Gnl2	64	56.716	Cricetulus_griseus_crigri
WBGene00003596	ngp-1	72	56.347	ENSCSEG00000020296	gnl2	69	53.347	Cynoglossus_semilaevis
WBGene00003596	ngp-1	60	58.989	ENSCVAG00000017712	gnl2	62	56.667	Cyprinodon_variegatus
WBGene00003596	ngp-1	78	54.564	ENSDARG00000098080	gnl2	98	69.925	Danio_rerio
WBGene00003596	ngp-1	75	56.587	ENSDNOG00000033314	-	65	56.356	Dasypus_novemcinctus
WBGene00003596	ngp-1	75	56.587	ENSDNOG00000016466	-	66	54.600	Dasypus_novemcinctus
WBGene00003596	ngp-1	92	44.354	ENSDORG00000014429	Gnl2	62	53.305	Dipodomys_ordii
WBGene00003596	ngp-1	74	57.363	FBgn0034243	Ns2	67	57.363	Drosophila_melanogaster
WBGene00003596	ngp-1	76	52.688	ENSETEG00000016674	GNL2	74	52.688	Echinops_telfairi
WBGene00003596	ngp-1	81	51.515	ENSEBUG00000005300	gnl2	71	56.930	Eptatretus_burgeri
WBGene00003596	ngp-1	75	57.451	ENSEASG00005012227	GNL2	63	57.356	Equus_asinus_asinus
WBGene00003596	ngp-1	85	52.542	ENSECAG00000008068	GNL2	63	57.356	Equus_caballus
WBGene00003596	ngp-1	83	48.544	ENSEEUG00000011345	GNL2	68	48.728	Erinaceus_europaeus
WBGene00003596	ngp-1	98	46.242	ENSELUG00000000675	gnl2	70	53.689	Esox_lucius
WBGene00003596	ngp-1	86	52.642	ENSFCAG00000008760	GNL2	64	56.568	Felis_catus
WBGene00003596	ngp-1	76	56.930	ENSFALG00000000909	GNL2	64	56.930	Ficedula_albicollis
WBGene00003596	ngp-1	77	56.723	ENSFDAG00000013274	GNL2	64	56.871	Fukomys_damarensis
WBGene00003596	ngp-1	72	55.730	ENSGMOG00000004427	gnl2	68	55.120	Gadus_morhua
WBGene00003596	ngp-1	76	57.996	ENSGALG00000001973	GNL2	59	57.996	Gallus_gallus
WBGene00003596	ngp-1	73	57.047	ENSGAFG00000008794	gnl2	73	55.769	Gambusia_affinis
WBGene00003596	ngp-1	73	55.257	ENSGACG00000013692	gnl2	69	56.000	Gasterosteus_aculeatus
WBGene00003596	ngp-1	65	55.155	ENSGAGG00000003905	GNL2	59	57.377	Gopherus_agassizii
WBGene00003596	ngp-1	88	52.390	ENSGGOG00000007704	GNL2	63	56.930	Gorilla_gorilla
WBGene00003596	ngp-1	75	49.134	ENSHGLG00000007433	-	66	49.134	Heterocephalus_glaber_female
WBGene00003596	ngp-1	76	57.265	ENSHGLG00000013728	GNL2	64	57.265	Heterocephalus_glaber_female
WBGene00003596	ngp-1	76	57.265	ENSHGLG00100002593	GNL2	64	57.265	Heterocephalus_glaber_male
WBGene00003596	ngp-1	55	55.034	ENSHGLG00100016036	-	55	55.263	Heterocephalus_glaber_male
WBGene00003596	ngp-1	75	49.134	ENSHGLG00100001365	-	66	49.134	Heterocephalus_glaber_male
WBGene00003596	ngp-1	73	52.573	ENSHCOG00000012109	gnl2	63	51.392	Hippocampus_comes
WBGene00003596	ngp-1	73	57.175	ENSIPUG00000017079	gnl2	65	56.616	Ictalurus_punctatus
WBGene00003596	ngp-1	85	52.381	ENSSTOG00000005217	GNL2	66	54.183	Ictidomys_tridecemlineatus
WBGene00003596	ngp-1	80	54.564	ENSJJAG00000010798	Gnl2	65	54.564	Jaculus_jaculus
WBGene00003596	ngp-1	93	48.785	ENSKMAG00000018855	gnl2	66	54.321	Kryptolebias_marmoratus
WBGene00003596	ngp-1	73	55.928	ENSLBEG00000008518	gnl2	66	55.098	Labrus_bergylta
WBGene00003596	ngp-1	77	55.814	ENSLACG00000016998	GNL2	63	57.583	Latimeria_chalumnae
WBGene00003596	ngp-1	91	50.528	ENSLAFG00000018723	GNL2	64	56.780	Loxodonta_africana
WBGene00003596	ngp-1	87	50.864	ENSMFAG00000039033	GNL2	63	57.356	Macaca_fascicularis
WBGene00003596	ngp-1	88	52.495	ENSMMUG00000008419	GNL2	63	57.356	Macaca_mulatta
WBGene00003596	ngp-1	88	52.495	ENSMNEG00000043438	GNL2	63	57.356	Macaca_nemestrina
WBGene00003596	ngp-1	88	50.460	ENSMLEG00000044421	GNL2	63	54.701	Mandrillus_leucophaeus
WBGene00003596	ngp-1	75	55.965	ENSMAMG00000007823	gnl2	65	55.965	Mastacembelus_armatus
WBGene00003596	ngp-1	73	58.166	ENSMZEG00005007393	gnl2	65	57.050	Maylandia_zebra
WBGene00003596	ngp-1	73	56.570	ENSMZEG00005008412	GNL2	68	55.628	Maylandia_zebra
WBGene00003596	ngp-1	76	53.404	ENSMGAG00000003267	GNL2	64	53.404	Meleagris_gallopavo
WBGene00003596	ngp-1	76	56.716	ENSMAUG00000018529	Gnl2	64	56.716	Mesocricetus_auratus
WBGene00003596	ngp-1	76	56.716	ENSMOCG00000016365	Gnl2	77	56.716	Microtus_ochrogaster
WBGene00003596	ngp-1	72	56.027	ENSMMOG00000018551	gnl2	68	55.292	Mola_mola
WBGene00003596	ngp-1	81	54.563	ENSMODG00000017773	GNL2	69	54.563	Monodelphis_domestica
WBGene00003596	ngp-1	73	56.696	ENSMALG00000011736	gnl2	65	55.748	Monopterus_albus
WBGene00003596	ngp-1	76	56.930	MGP_CAROLIEiJ_G0026458	Gnl2	64	56.930	Mus_caroli
WBGene00003596	ngp-1	76	56.930	ENSMUSG00000028869	Gnl2	64	56.930	Mus_musculus
WBGene00003596	ngp-1	76	56.356	MGP_PahariEiJ_G0028789	Gnl2	64	56.356	Mus_pahari
WBGene00003596	ngp-1	76	56.930	MGP_SPRETEiJ_G0027437	Gnl2	64	56.930	Mus_spretus
WBGene00003596	ngp-1	76	57.143	ENSMPUG00000014709	GNL2	64	57.143	Mustela_putorius_furo
WBGene00003596	ngp-1	88	51.471	ENSMLUG00000017139	GNL2	63	56.290	Myotis_lucifugus
WBGene00003596	ngp-1	86	51.977	ENSNGAG00000005990	Gnl2	63	56.624	Nannospalax_galili
WBGene00003596	ngp-1	73	57.366	ENSNBRG00000010291	gnl2	65	56.180	Neolamprologus_brichardi
WBGene00003596	ngp-1	88	52.574	ENSNLEG00000011599	GNL2	64	57.143	Nomascus_leucogenys
WBGene00003596	ngp-1	77	50.210	ENSMEUG00000015141	GNL2	70	50.210	Notamacropus_eugenii
WBGene00003596	ngp-1	71	52.860	ENSOPRG00000002625	GNL2	59	52.860	Ochotona_princeps
WBGene00003596	ngp-1	74	55.799	ENSOANG00000002057	GNL2	61	55.799	Ornithorhynchus_anatinus
WBGene00003596	ngp-1	75	57.019	ENSOCUG00000010877	GNL2	63	56.930	Oryctolagus_cuniculus
WBGene00003596	ngp-1	73	56.951	ENSORLG00000014645	gnl2	66	56.182	Oryzias_latipes
WBGene00003596	ngp-1	73	56.726	ENSORLG00020018867	gnl2	65	55.965	Oryzias_latipes_hni
WBGene00003596	ngp-1	73	56.951	ENSORLG00015003936	gnl2	65	56.182	Oryzias_latipes_hsok
WBGene00003596	ngp-1	77	55.158	ENSOMEG00000019611	gnl2	68	54.303	Oryzias_melastigma
WBGene00003596	ngp-1	75	54.721	ENSOGAG00000008643	GNL2	67	52.621	Otolemur_garnettii
WBGene00003596	ngp-1	86	53.497	ENSOARG00000019788	GNL2	68	54.528	Ovis_aries
WBGene00003596	ngp-1	88	52.206	ENSPPAG00000001559	GNL2	58	57.143	Pan_paniscus
WBGene00003596	ngp-1	88	51.554	ENSPPRG00000010528	GNL2	64	56.568	Panthera_pardus
WBGene00003596	ngp-1	88	51.554	ENSPTIG00000015095	GNL2	64	56.568	Panthera_tigris_altaica
WBGene00003596	ngp-1	88	52.022	ENSPTRG00000000549	GNL2	63	56.930	Pan_troglodytes
WBGene00003596	ngp-1	88	52.757	ENSPANG00000025285	GNL2	63	57.356	Papio_anubis
WBGene00003596	ngp-1	79	54.037	ENSPKIG00000005438	gnl2	68	54.037	Paramormyrops_kingsleyae
WBGene00003596	ngp-1	92	47.943	ENSPSIG00000007800	GNL2	64	56.376	Pelodiscus_sinensis
WBGene00003596	ngp-1	81	51.606	ENSPMGG00000002306	gnl2	69	52.881	Periophthalmus_magnuspinnatus
WBGene00003596	ngp-1	84	53.772	ENSPEMG00000021234	Gnl2	63	56.930	Peromyscus_maniculatus_bairdii
WBGene00003596	ngp-1	76	58.174	ENSPMAG00000000974	gnl2	62	58.174	Petromyzon_marinus
WBGene00003596	ngp-1	77	56.303	ENSPCIG00000000135	GNL2	65	56.303	Phascolarctos_cinereus
WBGene00003596	ngp-1	73	56.951	ENSPFOG00000012893	gnl2	63	56.182	Poecilia_formosa
WBGene00003596	ngp-1	71	57.701	ENSPLAG00000012483	gnl2	62	57.701	Poecilia_latipinna
WBGene00003596	ngp-1	71	57.701	ENSPMEG00000019133	gnl2	62	57.701	Poecilia_mexicana
WBGene00003596	ngp-1	73	56.951	ENSPREG00000005988	gnl2	68	56.182	Poecilia_reticulata
WBGene00003596	ngp-1	88	52.390	ENSPPYG00000001529	GNL2	64	57.143	Pongo_abelii
WBGene00003596	ngp-1	75	57.019	ENSPCOG00000016681	GNL2	64	56.930	Propithecus_coquereli
WBGene00003596	ngp-1	71	51.584	ENSPVAG00000010131	GNL2	51	63.804	Pteropus_vampyrus
WBGene00003596	ngp-1	81	52.295	ENSPNAG00000005426	gnl2	66	56.182	Pygocentrus_nattereri
WBGene00003596	ngp-1	76	56.930	ENSRNOG00000009430	Gnl2	63	56.930	Rattus_norvegicus
WBGene00003596	ngp-1	88	52.390	ENSRBIG00000038390	GNL2	66	56.930	Rhinopithecus_bieti
WBGene00003596	ngp-1	88	51.941	ENSRROG00000014347	GNL2	63	56.930	Rhinopithecus_roxellana
WBGene00003596	ngp-1	70	54.439	YNR053C	NOG2	96	52.452	Saccharomyces_cerevisiae
WBGene00003596	ngp-1	88	52.844	ENSSBOG00000020194	GNL2	64	57.356	Saimiri_boliviensis_boliviensis
WBGene00003596	ngp-1	77	56.513	ENSSHAG00000012267	GNL2	65	56.513	Sarcophilus_harrisii
WBGene00003596	ngp-1	85	50.784	ENSSFOG00015020300	gnl2	68	54.490	Scleropages_formosus
WBGene00003596	ngp-1	77	54.008	ENSSMAG00000003472	gnl2	67	54.487	Scophthalmus_maximus
WBGene00003596	ngp-1	73	56.278	ENSSDUG00000010382	gnl2	66	55.531	Seriola_dumerili
WBGene00003596	ngp-1	73	56.278	ENSSLDG00000003122	gnl2	65	55.531	Seriola_lalandi_dorsalis
WBGene00003596	ngp-1	75	56.009	ENSSARG00000011342	GNL2	64	55.789	Sorex_araneus
WBGene00003596	ngp-1	76	56.624	ENSSPUG00000003826	GNL2	65	56.716	Sphenodon_punctatus
WBGene00003596	ngp-1	80	53.265	ENSSPAG00000017473	gnl2	65	55.965	Stegastes_partitus
WBGene00003596	ngp-1	79	55.647	ENSSSCG00000031631	GNL2	66	55.647	Sus_scrofa
WBGene00003596	ngp-1	76	57.143	ENSTGUG00000001547	GNL2	64	57.143	Taeniopygia_guttata
WBGene00003596	ngp-1	73	56.444	ENSTRUG00000009789	gnl2	64	55.699	Takifugu_rubripes
WBGene00003596	ngp-1	73	56.054	ENSTNIG00000003733	gnl2	63	54.230	Tetraodon_nigroviridis
WBGene00003596	ngp-1	76	56.471	ENSTBEG00000003443	GNL2	55	64.727	Tupaia_belangeri
WBGene00003596	ngp-1	81	53.498	ENSTTRG00000008600	GNL2	60	57.500	Tursiops_truncatus
WBGene00003596	ngp-1	85	51.638	ENSUAMG00000014123	GNL2	66	55.441	Ursus_americanus
WBGene00003596	ngp-1	85	49.518	ENSUMAG00000000413	GNL2	67	52.749	Ursus_maritimus
WBGene00003596	ngp-1	96	43.069	ENSVPAG00000001579	GNL2	63	52.248	Vicugna_pacos
WBGene00003596	ngp-1	80	54.970	ENSVVUG00000023157	GNL2	67	54.970	Vulpes_vulpes
WBGene00003596	ngp-1	76	55.603	ENSXETG00000002161	gnl2	66	55.484	Xenopus_tropicalis
WBGene00003596	ngp-1	73	55.180	ENSXCOG00000001649	gnl2	65	54.466	Xiphophorus_couchianus
WBGene00003596	ngp-1	74	56.264	ENSXMAG00000026406	-	98	55.136	Xiphophorus_maculatus
WBGene00003596	ngp-1	73	56.726	ENSXMAG00000014898	gnl2	68	55.965	Xiphophorus_maculatus