EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003821 (Gene tree)
Gene ID: -
Gene Symbol: nst-1
Alias: -
Full Name: Guanine nucleotide-binding protein-like 3 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 2354 bases
Position: chrII:8280855-8283208
Accession: Q21086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K01C8	GN3L_Grn1	PF08701.11	3.5e-20	1	1
K01C8	GN3L_Grn1	PF08701.11	3.5e-20	1	1
K01C8	GTP_EFTU	PF00009.27	7.7e-08	1	1
K01C8	GTP_EFTU	PF00009.27	7.7e-08	1	1
K01C8	MMR_HSR1	PF01926.23	1e-16	1	1
K01C8	MMR_HSR1	PF01926.23	1e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K01C8.9.2	-	2118	NM_063348	K01C8.9.2	556 (aa)	NP_495749	Q21086
K01C8.9.1	-	1811	NM_063348	K01C8.9.1	556 (aa)	NP_495749	Q21086

Gene Model

Click here to download WBGene00003821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003821	nst-1	56	53.125	ENSCING00000010738	-	58	53.125	Ciona_intestinalis
WBGene00003821	nst-1	79	47.788	ENSCSAVG00000007394	-	80	47.788	Ciona_savignyi
WBGene00003821	nst-1	98	40.107	FBgn0038473	Ns1	96	40.285	Drosophila_melanogaster
WBGene00003821	nst-1	78	33.267	YER006W	-	96	33.267	Saccharomyces_cerevisiae