EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003826 (Gene tree)
Gene ID: -
Gene Symbol: ntl-3
Alias: -
Full Name: NOT-Like (Yeast CCR4/NOT complex component)
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 15458 bases
Position: chrIII:11831008-11846465
Accession: G5EFX8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y56A3A	Not3	PF04065.15	3.4e-73	1	1
Y56A3A	NOT2_3_5	PF04153.18	5.7e-37	1	1
Y56A3A	NOT2_3_5	PF04153.18	5.7e-37	1	1
Y56A3A	NOT2_3_5	PF04153.18	1.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y56A3A.1b.1	-	1345	-	Y56A3A.1b.1	198 (aa)	NP_001076653	Q0PDJ7
Y56A3A.1a	-	2396	NM_001083183	Y56A3A.1a	701 (aa)	NP_001076652	G5EFX8
Y56A3A.1b.2	-	1186	-	Y56A3A.1b.2	198 (aa)	NP_001076653	Q0PDJ7

Gene Model

Click here to download WBGene00003826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003826	ntl-3	97	52.332	ENSG00000088038	CNOT3	99	62.069	Homo_sapiens
WBGene00003826	ntl-3	91	44.199	ENSAPOG00000015499	CNOT3	69	46.185	Acanthochromis_polyacanthus
WBGene00003826	ntl-3	81	57.500	ENSAPOG00000015002	cnot3b	56	57.500	Acanthochromis_polyacanthus
WBGene00003826	ntl-3	97	52.332	ENSAMEG00000004528	CNOT3	61	52.332	Ailuropoda_melanoleuca
WBGene00003826	ntl-3	81	57.500	ENSACIG00000003652	cnot3b	76	57.500	Amphilophus_citrinellus
WBGene00003826	ntl-3	99	51.256	ENSACIG00000006635	cnot3a	77	54.696	Amphilophus_citrinellus
WBGene00003826	ntl-3	81	57.500	ENSAOCG00000018385	-	67	57.500	Amphiprion_ocellaris
WBGene00003826	ntl-3	81	57.500	ENSAPEG00000002640	cnot3b	71	57.500	Amphiprion_percula
WBGene00003826	ntl-3	97	52.332	ENSANAG00000025756	CNOT3	60	52.332	Aotus_nancymaae
WBGene00003826	ntl-3	97	52.332	ENSBTAG00000014900	CNOT3	61	52.332	Bos_taurus
WBGene00003826	ntl-3	97	52.332	ENSCJAG00000001094	CNOT3	60	52.332	Callithrix_jacchus
WBGene00003826	ntl-3	97	52.332	ENSCAFG00000002699	CNOT3	61	52.332	Canis_familiaris
WBGene00003826	ntl-3	97	52.332	ENSCAFG00020018359	CNOT3	61	52.332	Canis_lupus_dingo
WBGene00003826	ntl-3	97	52.332	ENSTSYG00000008058	CNOT3	61	52.332	Carlito_syrichta
WBGene00003826	ntl-3	97	52.332	ENSCAPG00000009533	CNOT3	61	52.332	Cavia_aperea
WBGene00003826	ntl-3	97	52.332	ENSCPOG00000020741	CNOT3	61	52.332	Cavia_porcellus
WBGene00003826	ntl-3	97	52.332	ENSCCAG00000036290	CNOT3	60	52.332	Cebus_capucinus
WBGene00003826	ntl-3	97	52.332	ENSCATG00000030324	CNOT3	61	52.332	Cercocebus_atys
WBGene00003826	ntl-3	97	52.332	ENSCLAG00000003302	CNOT3	99	66.667	Chinchilla_lanigera
WBGene00003826	ntl-3	97	52.332	ENSCSAG00000001900	CNOT3	61	52.332	Chlorocebus_sabaeus
WBGene00003826	ntl-3	97	52.332	ENSCANG00000013408	CNOT3	61	52.332	Colobus_angolensis_palliatus
WBGene00003826	ntl-3	66	45.038	ENSCGRG00000012929	Cnot3	55	39.506	Cricetulus_griseus_crigri
WBGene00003826	ntl-3	82	55.556	ENSCSEG00000016892	cnot3b	55	55.556	Cynoglossus_semilaevis
WBGene00003826	ntl-3	97	52.332	ENSDNOG00000045972	CNOT3	61	52.332	Dasypus_novemcinctus
WBGene00003826	ntl-3	82	58.642	ENSDORG00000008021	Cnot3	99	62.791	Dipodomys_ordii
WBGene00003826	ntl-3	97	52.332	ENSEASG00005021591	CNOT3	60	52.332	Equus_asinus_asinus
WBGene00003826	ntl-3	97	52.332	ENSECAG00000023181	CNOT3	60	52.332	Equus_caballus
WBGene00003826	ntl-3	97	52.332	ENSFCAG00000014042	CNOT3	61	52.332	Felis_catus
WBGene00003826	ntl-3	96	51.832	ENSFHEG00000023166	cnot3a	67	51.832	Fundulus_heteroclitus
WBGene00003826	ntl-3	79	58.333	ENSGAFG00000003459	cnot3b	53	41.748	Gambusia_affinis
WBGene00003826	ntl-3	97	52.332	ENSGGOG00000012996	CNOT3	61	52.332	Gorilla_gorilla
WBGene00003826	ntl-3	97	51.813	ENSHGLG00000008821	CNOT3	98	63.529	Heterocephalus_glaber_female
WBGene00003826	ntl-3	97	43.005	ENSHGLG00100006181	CNOT3	98	63.529	Heterocephalus_glaber_male
WBGene00003826	ntl-3	82	54.938	ENSIPUG00000000167	cnot3	54	54.938	Ictalurus_punctatus
WBGene00003826	ntl-3	97	52.332	ENSSTOG00000028248	CNOT3	61	52.332	Ictidomys_tridecemlineatus
WBGene00003826	ntl-3	97	52.332	ENSJJAG00000014594	Cnot3	99	62.791	Jaculus_jaculus
WBGene00003826	ntl-3	81	58.125	ENSLOCG00000000005	cnot3b	70	58.125	Lepisosteus_oculatus
WBGene00003826	ntl-3	97	45.178	ENSLAFG00000022133	CNOT3	61	45.178	Loxodonta_africana
WBGene00003826	ntl-3	97	52.332	ENSMFAG00000040073	CNOT3	61	52.332	Macaca_fascicularis
WBGene00003826	ntl-3	97	52.332	ENSMMUG00000009698	CNOT3	96	73.469	Macaca_mulatta
WBGene00003826	ntl-3	97	51.813	ENSMNEG00000036750	CNOT3	61	51.813	Macaca_nemestrina
WBGene00003826	ntl-3	97	38.071	ENSMLEG00000036579	CNOT3	60	43.144	Mandrillus_leucophaeus
WBGene00003826	ntl-3	82	59.259	ENSMAUG00000014996	Cnot3	61	52.332	Mesocricetus_auratus
WBGene00003826	ntl-3	96	53.158	ENSMICG00000002370	CNOT3	60	53.158	Microcebus_murinus
WBGene00003826	ntl-3	99	50.746	ENSMMOG00000013086	cnot3b	76	50.746	Mola_mola
WBGene00003826	ntl-3	95	53.061	ENSMODG00000004066	CNOT3	58	53.061	Monodelphis_domestica
WBGene00003826	ntl-3	81	57.500	ENSMALG00000004936	cnot3b	55	57.500	Monopterus_albus
WBGene00003826	ntl-3	82	59.259	MGP_CAROLIEiJ_G0029095	Cnot3	100	63.000	Mus_caroli
WBGene00003826	ntl-3	82	59.259	ENSMUSG00000035632	Cnot3	100	63.000	Mus_musculus
WBGene00003826	ntl-3	82	59.259	MGP_PahariEiJ_G0020964	Cnot3	100	63.000	Mus_pahari
WBGene00003826	ntl-3	82	59.259	MGP_SPRETEiJ_G0030148	Cnot3	100	63.000	Mus_spretus
WBGene00003826	ntl-3	97	52.332	ENSMPUG00000010352	CNOT3	61	52.332	Mustela_putorius_furo
WBGene00003826	ntl-3	97	52.332	ENSNGAG00000013266	Cnot3	61	52.332	Nannospalax_galili
WBGene00003826	ntl-3	81	57.500	ENSNBRG00000003336	cnot3b	63	57.500	Neolamprologus_brichardi
WBGene00003826	ntl-3	82	58.642	ENSNLEG00000006272	CNOT3	62	59.006	Nomascus_leucogenys
WBGene00003826	ntl-3	97	52.332	ENSODEG00000000705	CNOT3	97	70.130	Octodon_degus
WBGene00003826	ntl-3	97	52.332	ENSOCUG00000007691	CNOT3	61	52.332	Oryctolagus_cuniculus
WBGene00003826	ntl-3	96	51.832	ENSOMEG00000010309	cnot3a	54	58.125	Oryzias_melastigma
WBGene00003826	ntl-3	97	52.332	ENSOGAG00000006945	CNOT3	61	52.332	Otolemur_garnettii
WBGene00003826	ntl-3	97	52.332	ENSPPAG00000002748	CNOT3	61	52.332	Pan_paniscus
WBGene00003826	ntl-3	97	52.332	ENSPPRG00000011705	CNOT3	61	52.332	Panthera_pardus
WBGene00003826	ntl-3	97	52.332	ENSPTIG00000008781	CNOT3	78	52.332	Panthera_tigris_altaica
WBGene00003826	ntl-3	97	52.332	ENSPTRG00000046717	-	61	52.332	Pan_troglodytes
WBGene00003826	ntl-3	97	52.332	ENSPTRG00000011444	CNOT3	61	52.332	Pan_troglodytes
WBGene00003826	ntl-3	97	52.332	ENSPANG00000009375	CNOT3	61	52.332	Papio_anubis
WBGene00003826	ntl-3	98	51.546	ENSPKIG00000015967	-	77	50.761	Paramormyrops_kingsleyae
WBGene00003826	ntl-3	81	58.750	ENSPKIG00000011733	CNOT3	53	54.696	Paramormyrops_kingsleyae
WBGene00003826	ntl-3	97	52.850	ENSPEMG00000024185	Cnot3	61	52.850	Peromyscus_maniculatus_bairdii
WBGene00003826	ntl-3	83	56.805	ENSPMAG00000000174	-	74	56.805	Petromyzon_marinus
WBGene00003826	ntl-3	95	52.551	ENSPCIG00000023018	CNOT3	96	51.777	Phascolarctos_cinereus
WBGene00003826	ntl-3	97	52.083	ENSPFOG00000008693	cnot3a	54	54.144	Poecilia_formosa
WBGene00003826	ntl-3	97	52.083	ENSPREG00000007592	cnot3a	70	52.083	Poecilia_reticulata
WBGene00003826	ntl-3	97	52.332	ENSPPYG00000010372	CNOT3	61	52.332	Pongo_abelii
WBGene00003826	ntl-3	73	64.655	ENSPCAG00000011999	CNOT3	51	64.655	Procavia_capensis
WBGene00003826	ntl-3	97	52.332	ENSPCOG00000017673	CNOT3	62	52.332	Propithecus_coquereli
WBGene00003826	ntl-3	97	51.295	ENSPVAG00000015564	CNOT3	61	51.295	Pteropus_vampyrus
WBGene00003826	ntl-3	81	53.125	ENSPNYG00000003358	cnot3b	51	53.125	Pundamilia_nyererei
WBGene00003826	ntl-3	82	58.025	ENSPNAG00000017679	cnot3a	67	51.269	Pygocentrus_nattereri
WBGene00003826	ntl-3	82	59.259	ENSRNOG00000053234	Cnot3	58	59.627	Rattus_norvegicus
WBGene00003826	ntl-3	97	52.332	ENSRBIG00000031025	CNOT3	61	52.332	Rhinopithecus_bieti
WBGene00003826	ntl-3	97	52.332	ENSRROG00000003872	CNOT3	61	52.332	Rhinopithecus_roxellana
WBGene00003826	ntl-3	97	52.332	ENSSBOG00000030268	CNOT3	60	52.332	Saimiri_boliviensis_boliviensis
WBGene00003826	ntl-3	60	74.227	ENSSHAG00000009131	-	67	74.227	Sarcophilus_harrisii
WBGene00003826	ntl-3	91	54.696	ENSSMAG00000013235	cnot3a	52	54.696	Scophthalmus_maximus
WBGene00003826	ntl-3	96	52.332	ENSSDUG00000008181	cnot3a	77	54.696	Seriola_dumerili
WBGene00003826	ntl-3	97	52.332	ENSSSCG00000003264	CNOT3	60	52.332	Sus_scrofa
WBGene00003826	ntl-3	97	52.332	ENSUAMG00000005234	CNOT3	61	52.332	Ursus_americanus
WBGene00003826	ntl-3	97	46.114	ENSUMAG00000010934	CNOT3	89	46.114	Ursus_maritimus
WBGene00003826	ntl-3	97	52.332	ENSVVUG00000008239	CNOT3	57	52.332	Vulpes_vulpes
WBGene00003826	ntl-3	96	50.000	ENSXETG00000003166	cnot3	53	50.000	Xenopus_tropicalis
WBGene00003826	ntl-3	97	52.604	ENSXCOG00000019460	cnot3a	82	52.604	Xiphophorus_couchianus