EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00003847 (Gene tree)
Gene ID: -
Gene Symbol: blmp-1
Alias: -
Full Name: B lymphocyte-induced maturation protein 1 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5406 bases
Position: chrI:10409302-10414707
Accession: Q93560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F25D7	zf-C2H2	PF00096.26	2.1e-23	1	5
F25D7	zf-C2H2	PF00096.26	2.1e-23	2	5
F25D7	zf-C2H2	PF00096.26	2.1e-23	3	5
F25D7	zf-C2H2	PF00096.26	2.1e-23	4	5
F25D7	zf-C2H2	PF00096.26	2.1e-23	5	5
F25D7	zf-C2H2	PF00096.26	2.4e-23	1	5
F25D7	zf-C2H2	PF00096.26	2.4e-23	2	5
F25D7	zf-C2H2	PF00096.26	2.4e-23	3	5
F25D7	zf-C2H2	PF00096.26	2.4e-23	4	5
F25D7	zf-C2H2	PF00096.26	2.4e-23	5	5
F25D7	zf-met	PF12874.7	2.4e-08	1	1
F25D7	zf-met	PF12874.7	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F25D7.3a	-	2774	NM_001264441	F25D7.3a	817 (aa)	NP_001251370	Q93560
F25D7.3b	-	3324	NM_001264442	F25D7.3b	801 (aa)	NP_001251371	UPI0001890DA5

Gene Model

Click here to download WBGene00003847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00003847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00003847	blmp-1	52	61.379	ENSACIG00000009747	-	50	61.379	Amphilophus_citrinellus
WBGene00003847	blmp-1	51	47.391	ENSPKIG00000022335	prdm1b	59	49.282	Paramormyrops_kingsleyae