EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004025 (Gene tree)
Gene ID: -
Gene Symbol: phy-2
Alias: -
Full Name: Prolyl 4-hydroxylase subunit alpha-2
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 4890 bases
Position: chrIV:12211098-12215987
Accession: Q20065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F35G2	2OG-FeII_Oxy	PF03171.20	9.1e-08	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F35G2.4	-	1735	NM_069916	F35G2.4	539 (aa)	NP_502317	Q20065

Gene Model

Click here to download WBGene00004025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004025	phy-2	100	55.413	WBGene00001077	dpy-18	97	55.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004025	phy-2	83	47.241	ENSCSAVG00000010950	-	97	47.241	Ciona_savignyi
WBGene00004025	phy-2	96	30.189	FBgn0039779	PH4alphaSG2	96	30.189	Drosophila_melanogaster
WBGene00004025	phy-2	95	31.520	FBgn0051013	CG31013	97	31.520	Drosophila_melanogaster
WBGene00004025	phy-2	93	34.791	FBgn0051015	PH4alphaPV	96	34.489	Drosophila_melanogaster