EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004049 (Gene tree)
Gene ID: -
Gene Symbol: parp-1
Alias: -
Full Name: Poly(ADP-ribose) polymerase pme-1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 16984 bases
Position: chrI:2907730-2924713
Accession: Q9N4H4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y71F9AL	PARP	PF00644.20	7.6e-58	1	1
Y71F9AL	PARP	PF00644.20	1.7e-57	1	1
Y71F9AL	PARP	PF00644.20	9.6e-57	1	1
Y71F9AL	PARP	PF00644.20	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y71F9AL.18d	-	1476	NM_001313544	Y71F9AL.18d	348 (aa)	NP_001300473	A0A0K3ARD5
Y71F9AL.18a	-	2984	NM_058671	Y71F9AL.18a	945 (aa)	NP_491072	Q9N4H4
Y71F9AL.18c	-	885	NM_001313543	Y71F9AL.18c	257 (aa)	NP_001300472	A0A0K3AWQ2
Y71F9AL.18b	-	366	NM_001313542	Y71F9AL.18b	88 (aa)	NP_001300471	A0A0K3AUD3

Gene Model

Click here to download WBGene00004049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004049	parp-1	100	45.594	ENSG00000143799	PARP1	91	38.835	Homo_sapiens
WBGene00004049	parp-1	100	46.183	ENSAPOG00000006414	parp1	86	43.478	Acanthochromis_polyacanthus
WBGene00004049	parp-1	100	45.977	ENSAMEG00000014451	PARP1	82	44.024	Ailuropoda_melanoleuca
WBGene00004049	parp-1	100	45.420	ENSACIG00000005651	parp1	86	43.182	Amphilophus_citrinellus
WBGene00004049	parp-1	100	46.183	ENSAOCG00000021005	parp1	86	43.750	Amphiprion_ocellaris
WBGene00004049	parp-1	100	46.183	ENSAPEG00000004784	parp1	86	43.750	Amphiprion_percula
WBGene00004049	parp-1	100	46.183	ENSATEG00000010457	parp1	83	44.821	Anabas_testudineus
WBGene00004049	parp-1	100	46.388	ENSAPLG00000014039	PARP1	75	44.444	Anas_platyrhynchos
WBGene00004049	parp-1	99	44.507	ENSACAG00000006189	PARP1	83	43.393	Anolis_carolinensis
WBGene00004049	parp-1	100	45.594	ENSANAG00000032699	PARP1	83	43.426	Aotus_nancymaae
WBGene00004049	parp-1	100	45.420	ENSACLG00000015489	parp1	87	43.182	Astatotilapia_calliptera
WBGene00004049	parp-1	100	46.743	ENSAMXG00000006465	parp1	91	43.825	Astyanax_mexicanus
WBGene00004049	parp-1	100	45.977	ENSBTAG00000000837	PARP1	83	43.825	Bos_taurus
WBGene00004049	parp-1	100	45.211	ENSCJAG00000012831	PARP1	83	43.227	Callithrix_jacchus
WBGene00004049	parp-1	100	45.977	ENSCAFG00000016089	PARP1	83	43.825	Canis_familiaris
WBGene00004049	parp-1	100	46.360	ENSCAFG00020001660	PARP1	84	44.024	Canis_lupus_dingo
WBGene00004049	parp-1	100	45.977	ENSCHIG00000018072	PARP1	85	43.825	Capra_hircus
WBGene00004049	parp-1	100	45.977	ENSTSYG00000003699	PARP1	79	43.625	Carlito_syrichta
WBGene00004049	parp-1	96	39.542	ENSCAPG00000011113	-	80	33.728	Cavia_aperea
WBGene00004049	parp-1	100	45.594	ENSCPOG00000015643	-	83	43.426	Cavia_porcellus
WBGene00004049	parp-1	100	45.977	ENSCCAG00000033484	PARP1	83	43.625	Cebus_capucinus
WBGene00004049	parp-1	100	45.594	ENSCATG00000038981	PARP1	83	43.625	Cercocebus_atys
WBGene00004049	parp-1	100	45.594	ENSCLAG00000006637	PARP1	83	43.825	Chinchilla_lanigera
WBGene00004049	parp-1	100	46.388	ENSCPBG00000011958	PARP1	83	44.841	Chrysemys_picta_bellii
WBGene00004049	parp-1	98	43.642	ENSCING00000019384	-	99	41.788	Ciona_intestinalis
WBGene00004049	parp-1	95	40.476	ENSCSAVG00000004652	-	100	45.581	Ciona_savignyi
WBGene00004049	parp-1	100	45.594	ENSCANG00000041340	PARP1	83	43.625	Colobus_angolensis_palliatus
WBGene00004049	parp-1	100	45.594	ENSCGRG00001020559	Parp1	83	43.825	Cricetulus_griseus_chok1gshd
WBGene00004049	parp-1	100	45.594	ENSCGRG00000004864	Parp1	83	43.825	Cricetulus_griseus_crigri
WBGene00004049	parp-1	100	46.360	ENSCSEG00000020665	parp1	99	33.702	Cynoglossus_semilaevis
WBGene00004049	parp-1	100	46.743	ENSCVAG00000021372	parp1	82	44.223	Cyprinodon_variegatus
WBGene00004049	parp-1	100	46.008	ENSDARG00000019529	parp1	85	43.019	Danio_rerio
WBGene00004049	parp-1	100	47.148	ENSDNOG00000012059	PARP1	82	44.689	Dasypus_novemcinctus
WBGene00004049	parp-1	100	45.594	ENSDORG00000005234	Parp1	83	43.426	Dipodomys_ordii
WBGene00004049	parp-1	99	41.154	FBgn0010247	Parp	86	38.050	Drosophila_melanogaster
WBGene00004049	parp-1	83	43.836	ENSETEG00000013254	PARP1	57	44.379	Echinops_telfairi
WBGene00004049	parp-1	99	44.633	ENSEBUG00000005820	parp1	79	42.353	Eptatretus_burgeri
WBGene00004049	parp-1	95	46.246	ENSEASG00005013275	PARP1	82	44.330	Equus_asinus_asinus
WBGene00004049	parp-1	100	45.977	ENSECAG00000019207	PARP1	83	44.024	Equus_caballus
WBGene00004049	parp-1	100	45.977	ENSEEUG00000012253	PARP1	75	43.373	Erinaceus_europaeus
WBGene00004049	parp-1	100	46.360	ENSELUG00000017336	parp1	87	42.301	Esox_lucius
WBGene00004049	parp-1	100	46.360	ENSFCAG00000005777	PARP1	83	43.825	Felis_catus
WBGene00004049	parp-1	100	45.149	ENSFALG00000011578	PARP1	83	44.008	Ficedula_albicollis
WBGene00004049	parp-1	100	45.211	ENSFDAG00000017662	PARP1	83	44.024	Fukomys_damarensis
WBGene00004049	parp-1	100	47.510	ENSFHEG00000001117	parp1	92	44.223	Fundulus_heteroclitus
WBGene00004049	parp-1	100	47.510	ENSGMOG00000014929	parp1	86	43.667	Gadus_morhua
WBGene00004049	parp-1	100	45.627	ENSGALG00000009228	PARP1	83	44.246	Gallus_gallus
WBGene00004049	parp-1	100	46.743	ENSGAFG00000010450	parp1	87	43.945	Gambusia_affinis
WBGene00004049	parp-1	100	46.183	ENSGACG00000011280	parp1	86	43.561	Gasterosteus_aculeatus
WBGene00004049	parp-1	100	46.388	ENSGAGG00000010066	PARP1	83	44.841	Gopherus_agassizii
WBGene00004049	parp-1	100	45.594	ENSGGOG00000006308	PARP1	83	43.625	Gorilla_gorilla
WBGene00004049	parp-1	100	45.420	ENSHBUG00000010490	parp1	86	43.182	Haplochromis_burtoni
WBGene00004049	parp-1	100	45.211	ENSHGLG00000003992	PARP1	77	44.223	Heterocephalus_glaber_female
WBGene00004049	parp-1	100	45.211	ENSHGLG00100016965	PARP1	77	44.223	Heterocephalus_glaber_male
WBGene00004049	parp-1	100	47.126	ENSHCOG00000011619	parp1	86	43.750	Hippocampus_comes
WBGene00004049	parp-1	100	45.211	ENSIPUG00000020250	parp1	81	43.625	Ictalurus_punctatus
WBGene00004049	parp-1	100	45.594	ENSSTOG00000016000	PARP1	83	43.625	Ictidomys_tridecemlineatus
WBGene00004049	parp-1	100	45.977	ENSJJAG00000023497	Parp1	82	43.825	Jaculus_jaculus
WBGene00004049	parp-1	100	45.420	ENSKMAG00000011627	parp1	86	43.371	Kryptolebias_marmoratus
WBGene00004049	parp-1	100	45.420	ENSLBEG00000013376	parp1	85	43.275	Labrus_bergylta
WBGene00004049	parp-1	100	46.565	ENSLACG00000002735	PARP1	64	43.070	Latimeria_chalumnae
WBGene00004049	parp-1	100	44.697	ENSLOCG00000015798	parp1	87	42.561	Lepisosteus_oculatus
WBGene00004049	parp-1	100	45.594	ENSLAFG00000007830	PARP1	83	44.024	Loxodonta_africana
WBGene00004049	parp-1	100	45.594	ENSMFAG00000002526	PARP1	83	43.625	Macaca_fascicularis
WBGene00004049	parp-1	100	45.594	ENSMMUG00000021820	PARP1	83	43.625	Macaca_mulatta
WBGene00004049	parp-1	100	45.594	ENSMNEG00000034074	PARP1	83	43.625	Macaca_nemestrina
WBGene00004049	parp-1	100	43.893	ENSMLEG00000012344	PARP1	83	42.744	Mandrillus_leucophaeus
WBGene00004049	parp-1	100	45.802	ENSMAMG00000020652	parp1	83	44.422	Mastacembelus_armatus
WBGene00004049	parp-1	100	45.420	ENSMZEG00005016907	parp1	86	43.182	Maylandia_zebra
WBGene00004049	parp-1	100	45.627	ENSMGAG00000007760	PARP1	83	44.246	Meleagris_gallopavo
WBGene00004049	parp-1	100	45.977	ENSMAUG00000008306	Parp1	83	44.024	Mesocricetus_auratus
WBGene00004049	parp-1	100	40.385	ENSMICG00000017076	PARP1	83	40.918	Microcebus_murinus
WBGene00004049	parp-1	100	46.360	ENSMOCG00000014315	Parp1	83	44.622	Microtus_ochrogaster
WBGene00004049	parp-1	100	46.183	ENSMMOG00000015966	parp1	88	43.879	Mola_mola
WBGene00004049	parp-1	100	47.126	ENSMODG00000006076	PARP1	83	44.223	Monodelphis_domestica
WBGene00004049	parp-1	98	45.914	ENSMALG00000004057	parp1	85	42.748	Monopterus_albus
WBGene00004049	parp-1	100	46.360	MGP_CAROLIEiJ_G0014978	Parp1	100	40.000	Mus_caroli
WBGene00004049	parp-1	100	46.360	ENSMUSG00000026496	Parp1	99	40.000	Mus_musculus
WBGene00004049	parp-1	100	46.360	MGP_SPRETEiJ_G0015777	Parp1	100	40.000	Mus_spretus
WBGene00004049	parp-1	100	46.360	ENSMPUG00000004585	PARP1	83	44.024	Mustela_putorius_furo
WBGene00004049	parp-1	80	48.239	ENSMLUG00000012285	PARP1	77	45.346	Myotis_lucifugus
WBGene00004049	parp-1	100	45.977	ENSNGAG00000003885	Parp1	83	44.223	Nannospalax_galili
WBGene00004049	parp-1	100	45.420	ENSNBRG00000017434	parp1	86	43.429	Neolamprologus_brichardi
WBGene00004049	parp-1	100	45.977	ENSNLEG00000013905	PARP1	75	45.257	Nomascus_leucogenys
WBGene00004049	parp-1	100	47.510	ENSMEUG00000007720	PARP1	65	46.243	Notamacropus_eugenii
WBGene00004049	parp-1	100	45.594	ENSOPRG00000011722	PARP1	83	43.825	Ochotona_princeps
WBGene00004049	parp-1	98	45.217	ENSODEG00000007424	PARP1	83	43.662	Octodon_degus
WBGene00004049	parp-1	100	45.038	ENSONIG00000013486	parp1	86	42.992	Oreochromis_niloticus
WBGene00004049	parp-1	100	45.211	ENSOANG00000001488	PARP1	83	44.135	Ornithorhynchus_anatinus
WBGene00004049	parp-1	100	46.360	ENSOCUG00000017820	PARP1	83	43.912	Oryctolagus_cuniculus
WBGene00004049	parp-1	100	47.126	ENSORLG00000013691	parp1	92	44.821	Oryzias_latipes
WBGene00004049	parp-1	100	47.126	ENSORLG00020001074	parp1	91	44.821	Oryzias_latipes_hni
WBGene00004049	parp-1	100	47.126	ENSORLG00015007090	parp1	92	44.821	Oryzias_latipes_hsok
WBGene00004049	parp-1	99	39.255	ENSOMEG00000007822	parp1	96	38.177	Oryzias_melastigma
WBGene00004049	parp-1	100	45.594	ENSOGAG00000016206	PARP1	83	43.625	Otolemur_garnettii
WBGene00004049	parp-1	100	45.594	ENSOARG00000000811	PARP1	83	43.625	Ovis_aries
WBGene00004049	parp-1	100	45.977	ENSPPAG00000040862	PARP1	83	43.825	Pan_paniscus
WBGene00004049	parp-1	100	46.360	ENSPPRG00000003528	PARP1	83	43.825	Panthera_pardus
WBGene00004049	parp-1	82	47.685	ENSPTIG00000009102	PARP1	82	41.886	Panthera_tigris_altaica
WBGene00004049	parp-1	100	45.977	ENSPTRG00000002049	PARP1	83	43.825	Pan_troglodytes
WBGene00004049	parp-1	100	45.594	ENSPANG00000011198	PARP1	83	43.625	Papio_anubis
WBGene00004049	parp-1	100	45.594	ENSPKIG00000006039	parp1	83	42.557	Paramormyrops_kingsleyae
WBGene00004049	parp-1	100	47.148	ENSPSIG00000016374	PARP1	82	44.401	Pelodiscus_sinensis
WBGene00004049	parp-1	100	45.594	ENSPMGG00000008936	parp1	85	42.533	Periophthalmus_magnuspinnatus
WBGene00004049	parp-1	100	45.594	ENSPEMG00000020230	Parp1	83	43.825	Peromyscus_maniculatus_bairdii
WBGene00004049	parp-1	100	47.126	ENSPCIG00000006436	PARP1	99	33.300	Phascolarctos_cinereus
WBGene00004049	parp-1	100	46.743	ENSPFOG00000002342	parp1	86	44.422	Poecilia_formosa
WBGene00004049	parp-1	100	46.743	ENSPLAG00000000909	parp1	86	44.422	Poecilia_latipinna
WBGene00004049	parp-1	100	46.743	ENSPMEG00000013979	parp1	86	44.422	Poecilia_mexicana
WBGene00004049	parp-1	100	46.743	ENSPREG00000001114	parp1	86	44.422	Poecilia_reticulata
WBGene00004049	parp-1	100	45.977	ENSPPYG00000000164	PARP1	83	43.825	Pongo_abelii
WBGene00004049	parp-1	100	45.594	ENSPCOG00000016918	PARP1	83	43.426	Propithecus_coquereli
WBGene00004049	parp-1	81	49.533	ENSPVAG00000005543	PARP1	63	49.533	Pteropus_vampyrus
WBGene00004049	parp-1	100	45.420	ENSPNYG00000009702	parp1	87	43.182	Pundamilia_nyererei
WBGene00004049	parp-1	100	45.594	ENSPNAG00000002787	parp1	83	44.024	Pygocentrus_nattereri
WBGene00004049	parp-1	100	46.743	ENSRNOG00000003084	Parp1	83	44.223	Rattus_norvegicus
WBGene00004049	parp-1	100	45.977	ENSRBIG00000044893	PARP1	99	41.330	Rhinopithecus_bieti
WBGene00004049	parp-1	100	40.927	ENSRROG00000040615	-	97	36.896	Rhinopithecus_roxellana
WBGene00004049	parp-1	100	45.977	ENSRROG00000029280	PARP1	99	41.330	Rhinopithecus_roxellana
WBGene00004049	parp-1	100	45.977	ENSSBOG00000010144	PARP1	83	43.426	Saimiri_boliviensis_boliviensis
WBGene00004049	parp-1	100	47.510	ENSSHAG00000001991	PARP1	83	44.622	Sarcophilus_harrisii
WBGene00004049	parp-1	100	45.833	ENSSFOG00015020017	parp1	82	43.825	Scleropages_formosus
WBGene00004049	parp-1	100	44.828	ENSSMAG00000013799	parp1	84	42.629	Scophthalmus_maximus
WBGene00004049	parp-1	100	46.183	ENSSDUG00000016626	parp1	87	43.750	Seriola_dumerili
WBGene00004049	parp-1	100	46.183	ENSSLDG00000006384	parp1	87	43.750	Seriola_lalandi_dorsalis
WBGene00004049	parp-1	99	40.730	ENSSPUG00000007790	PARP1	82	40.945	Sphenodon_punctatus
WBGene00004049	parp-1	100	45.420	ENSSPAG00000019074	parp1	92	46.229	Stegastes_partitus
WBGene00004049	parp-1	100	46.360	ENSSSCG00000023660	PARP1	83	43.426	Sus_scrofa
WBGene00004049	parp-1	100	45.896	ENSTGUG00000004260	-	81	44.401	Taeniopygia_guttata
WBGene00004049	parp-1	100	46.743	ENSTRUG00000014490	parp1	94	43.750	Takifugu_rubripes
WBGene00004049	parp-1	100	46.743	ENSTNIG00000016384	parp1	93	44.129	Tetraodon_nigroviridis
WBGene00004049	parp-1	98	46.875	ENSTBEG00000002364	PARP1	64	44.266	Tupaia_belangeri
WBGene00004049	parp-1	100	44.828	ENSTTRG00000000188	PARP1	78	43.919	Tursiops_truncatus
WBGene00004049	parp-1	100	46.360	ENSUAMG00000014388	PARP1	82	44.223	Ursus_americanus
WBGene00004049	parp-1	99	38.506	ENSUMAG00000014555	PARP1	82	39.059	Ursus_maritimus
WBGene00004049	parp-1	100	45.977	ENSVPAG00000011411	PARP1	73	45.833	Vicugna_pacos
WBGene00004049	parp-1	100	45.977	ENSVVUG00000001655	PARP1	83	43.825	Vulpes_vulpes
WBGene00004049	parp-1	98	45.087	ENSXETG00000022610	parp1	82	43.173	Xenopus_tropicalis
WBGene00004049	parp-1	100	43.774	ENSXCOG00000004611	parp1	99	41.609	Xiphophorus_couchianus
WBGene00004049	parp-1	89	42.308	ENSXCOG00000019444	-	56	42.308	Xiphophorus_couchianus
WBGene00004049	parp-1	100	46.360	ENSXMAG00000003632	parp1	87	43.555	Xiphophorus_maculatus