EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004189 (Gene tree)
Gene ID: -
Gene Symbol: pars-1
Alias: -
Full Name: Prolyl Amino-acyl tRNA Synthetase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2678 bases
Position: chrIII:7238607-7241284
Accession: Q65ZK5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T20H4	HGTP_anticodon	PF03129.20	2.4e-18	1	1
T20H4	HGTP_anticodon	PF03129.20	2.4e-18	1	1
T20H4	HGTP_anticodon	PF03129.20	1.7e-12	1	1
T20H4	tRNA-synt_2b	PF00587.25	1.6e-16	1	1
T20H4	tRNA-synt_2b	PF00587.25	2.6e-16	1	1
T20H4	tRNA-synt_2b	PF00587.25	2.6e-16	1	1
T20H4	ProRS-C_1	PF09180.11	1.6e-20	1	1
T20H4	ProRS-C_1	PF09180.11	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T20H4.3a.1	-	1977	NM_001027606	T20H4.3a.1	581 (aa)	NP_001022777	Q22620
T20H4.3a.2	-	1940	NM_001027606	T20H4.3a.2	581 (aa)	NP_001022777	Q22620
T20H4.3b	-	1808	NM_001027607	T20H4.3b	454 (aa)	NP_001022778	Q65ZK5

Gene Model

Click here to download WBGene00004189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004189	pars-1	80	67.671	ENSEBUG00000016088	-	95	59.200	Eptatretus_burgeri
WBGene00004189	pars-1	98	59.539	ENSPLAG00000023121	-	93	54.063	Poecilia_latipinna
WBGene00004189	pars-1	80	64.033	YHR020W	-	73	55.621	Saccharomyces_cerevisiae