EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00004242 (Gene tree)
Gene ID: -
Gene Symbol: puf-6
Alias: -
Full Name: Pumilio domain-containing protein 6
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3687 bases
Position: chrII:13039790-13043476
Accession: O01322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F18A11	PUF	PF00806.19	1e-29	1	1
F18A11	PUF	PF00806.19	1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F18A11.1.2	-	1883	NM_064372	F18A11.1.2	485 (aa)	NP_496773	O01322
F18A11.1.1	-	1914	NM_064372	F18A11.1.1	485 (aa)	NP_496773	O01322

Gene Model

Click here to download WBGene00004242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004242	puf-6	92	43.237	WBGene00022257	puf-11	87	43.237
WBGene00004242	puf-6	91	40.787	WBGene00004239	puf-3	95	40.787
WBGene00004242	puf-6	100	97.526	WBGene00004243	puf-7	100	97.526
WBGene00004242	puf-6	76	40.945	WBGene00001402	fbf-2	60	40.945
WBGene00004242	puf-6	76	40.157	WBGene00001401	fbf-1	62	40.157