EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
WBGene00004269 (Gene tree)
Gene ID
-
Gene Symbol
rab-6.1
Alias
-
Full Name
Ras-related protein Rab-6.1
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
1135 bases
Position
chrIII:9004821-9005955
Accession
P34213
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
F59B2MMR_HSR1PF01926.230.0001311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
F59B2.7-832NM_066592F59B2.7205 (aa)NP_498993P34213
Gene Model
Click here to download WBGene00004269's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004269's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
WBGene00004269rab-6.19137.766WBGene00022177Y71H2AM.129837.186
WBGene00004269rab-6.17938.272WBGene00019317K02E10.17438.272
WBGene00004269rab-6.17940.606WBGene000070674R79.25340.606
WBGene00004269rab-6.18138.922WBGene00006833unc-1089735.071
WBGene00004269rab-6.17942.236WBGene00004266rab-17942.236
WBGene00004269rab-6.19441.969WBGene00004268rab-59141.969
WBGene00004269rab-6.17841.875WBGene00004284rab-357641.875
WBGene00004269rab-6.17837.195WBGene00004286rab-397237.195
WBGene00004269rab-6.17941.718WBGene00004282rab-307541.718
WBGene00004269rab-6.19383.246WBGene00004270rab-6.29383.246
WBGene00004269rab-6.19437.500WBGene00004271rab-79637.500
WBGene00004269rab-6.17936.025WBGene00004274rab-11.17636.025
WBGene00004269rab-6.19434.375WBGene00004275rab-11.29434.375
WBGene00004269rab-6.19533.663WBGene00004276rab-149533.663
WBGene00004269rab-6.18239.645WBGene00004277rab-1810036.019
WBGene00004269rab-6.18536.000WBGene00004279rab-218536.000
WBGene00004269rab-6.19331.633WBGene00010038rheb-19231.633
WBGene00004269rab-6.18732.022WBGene00004309rap-38332.022
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004269rab-6.19976.699ENSG00000175582RAB6A10076.136Homo_sapiens
WBGene00004269rab-6.18783.708ENSAPOG00000005731rab6a8383.708Acanthochromis_polyacanthus
WBGene00004269rab-6.19976.699ENSAMEG00000017285RAB6A8076.699Ailuropoda_melanoleuca
WBGene00004269rab-6.19976.812ENSACIG00000014605rab6a9876.812Amphilophus_citrinellus
WBGene00004269rab-6.19976.699ENSAOCG00000012277-9876.699Amphiprion_ocellaris
WBGene00004269rab-6.18783.708ENSATEG00000015992rab418383.708Anabas_testudineus
WBGene00004269rab-6.19976.699ENSATEG00000012459-9876.699Anabas_testudineus
WBGene00004269rab-6.19873.171ENSACAG00000015304-9373.171Anolis_carolinensis
WBGene00004269rab-6.19976.699ENSANAG00000036364RAB6A9876.699Aotus_nancymaae
WBGene00004269rab-6.18783.708ENSACLG00000019423rab418383.708Astatotilapia_calliptera
WBGene00004269rab-6.19976.699ENSAMXG00000032547rab6a9876.699Astyanax_mexicanus
WBGene00004269rab-6.18781.006ENSAMXG00000033216rab419181.006Astyanax_mexicanus
WBGene00004269rab-6.19976.699ENSBTAG00000000025RAB6A9876.699Bos_taurus
WBGene00004269rab-6.19976.699ENSCJAG00000039039RAB6A9876.699Callithrix_jacchus
WBGene00004269rab-6.19976.214ENSCAFG00000028870RAB6A9876.214Canis_familiaris
WBGene00004269rab-6.19976.699ENSCAFG00020002206RAB6A9876.699Canis_lupus_dingo
WBGene00004269rab-6.19976.699ENSCHIG00000023957RAB6A9876.699Capra_hircus
WBGene00004269rab-6.19976.699ENSTSYG00000013951RAB6A9876.699Carlito_syrichta
WBGene00004269rab-6.19976.699ENSCATG00000012428RAB6A9876.699Cercocebus_atys
WBGene00004269rab-6.19976.214ENSCLAG00000015536RAB6A9876.214Chinchilla_lanigera
WBGene00004269rab-6.19976.699ENSCSAG00000004062RAB6A9876.699Chlorocebus_sabaeus
WBGene00004269rab-6.19966.019ENSCHOG00000000992RAB6A9866.019Choloepus_hoffmanni
WBGene00004269rab-6.19976.699ENSCPBG00000000041RAB6A9876.699Chrysemys_picta_bellii
WBGene00004269rab-6.19973.810ENSCING00000002960-9973.810Ciona_intestinalis
WBGene00004269rab-6.19973.810ENSCSAVG00000009128-9973.810Ciona_savignyi
WBGene00004269rab-6.19976.699ENSCANG00000029094RAB6A9876.699Colobus_angolensis_palliatus
WBGene00004269rab-6.19976.699ENSCGRG00001018153Rab6a9876.699Cricetulus_griseus_chok1gshd
WBGene00004269rab-6.19874.627ENSCSEG00000004941rab419574.627Cynoglossus_semilaevis
WBGene00004269rab-6.19976.699ENSCVAG00000022249rab6a9876.699Cyprinodon_variegatus
WBGene00004269rab-6.19875.728ENSCVAG00000001618rab419575.728Cyprinodon_variegatus
WBGene00004269rab-6.19976.699ENSDARG00000103714rab6a9876.699Danio_rerio
WBGene00004269rab-6.19278.238ENSDARG00000029885rab419178.238Danio_rerio
WBGene00004269rab-6.19976.699ENSDNOG00000042746RAB6A9876.699Dasypus_novemcinctus
WBGene00004269rab-6.19976.214ENSDORG00000027784Rab6a9876.214Dipodomys_ordii
WBGene00004269rab-6.19975.845FBgn0015797Rab69975.845Drosophila_melanogaster
WBGene00004269rab-6.16389.231ENSETEG00000009412-6289.231Echinops_telfairi
WBGene00004269rab-6.19976.699ENSEASG00005017944RAB6A9876.699Equus_asinus_asinus
WBGene00004269rab-6.19976.699ENSECAG00000022694-9876.699Equus_caballus
WBGene00004269rab-6.19976.214ENSELUG00000008876rab6a9876.214Esox_lucius
WBGene00004269rab-6.19976.699ENSFCAG00000023834RAB6A9876.699Felis_catus
WBGene00004269rab-6.19976.699ENSFALG00000008011RAB6A9876.699Ficedula_albicollis
WBGene00004269rab-6.19976.214ENSFDAG00000010948-9876.214Fukomys_damarensis
WBGene00004269rab-6.18783.708ENSGMOG00000004095rab418383.708Gadus_morhua
WBGene00004269rab-6.19875.122ENSGALG00000026278-9575.122Gallus_gallus
WBGene00004269rab-6.19976.699ENSGALG00000017320RAB6A9876.699Gallus_gallus
WBGene00004269rab-6.19976.699ENSGAFG00000006356rab6a9876.699Gambusia_affinis
WBGene00004269rab-6.19776.238ENSGAFG00000019872rab419576.238Gambusia_affinis
WBGene00004269rab-6.18783.708ENSGACG00000017153rab418383.708Gasterosteus_aculeatus
WBGene00004269rab-6.19976.699ENSGACG00000020356rab6a9876.699Gasterosteus_aculeatus
WBGene00004269rab-6.19976.699ENSGAGG00000021701RAB6A9876.699Gopherus_agassizii
WBGene00004269rab-6.19976.699ENSGGOG00000010610RAB6A9876.699Gorilla_gorilla
WBGene00004269rab-6.19976.699ENSHBUG00000000890rab6a9876.699Haplochromis_burtoni
WBGene00004269rab-6.19976.214ENSHGLG00000008829-9876.214Heterocephalus_glaber_female
WBGene00004269rab-6.19975.728ENSHGLG00100014550-9875.728Heterocephalus_glaber_male
WBGene00004269rab-6.19874.627ENSHCOG00000004404rab419574.627Hippocampus_comes
WBGene00004269rab-6.19976.699ENSHCOG00000006550-9876.699Hippocampus_comes
WBGene00004269rab-6.19976.812ENSIPUG00000021740rab6a9876.812Ictalurus_punctatus
WBGene00004269rab-6.18783.708ENSIPUG00000019382rab419479.330Ictalurus_punctatus
WBGene00004269rab-6.19976.699ENSSTOG00000023497RAB6A9876.699Ictidomys_tridecemlineatus
WBGene00004269rab-6.18187.349ENSKMAG00000013146-8687.349Kryptolebias_marmoratus
WBGene00004269rab-6.19976.214ENSLBEG00000003748rab6a9876.214Labrus_bergylta
WBGene00004269rab-6.19974.272ENSLACG00000005168RAB6A9874.272Latimeria_chalumnae
WBGene00004269rab-6.19875.610ENSLACG00000013980rab419575.610Latimeria_chalumnae
WBGene00004269rab-6.19875.122ENSLOCG00000015191rab419575.122Lepisosteus_oculatus
WBGene00004269rab-6.19976.699ENSMFAG00000041027RAB6A9876.699Macaca_fascicularis
WBGene00004269rab-6.19976.699ENSMNEG00000029216RAB6A9876.699Macaca_nemestrina
WBGene00004269rab-6.19976.699ENSMLEG00000038771RAB6A9876.699Mandrillus_leucophaeus
WBGene00004269rab-6.19976.699ENSMAMG00000012488rab6a9876.699Mastacembelus_armatus
WBGene00004269rab-6.19875.243ENSMAMG00000020859rab419575.243Mastacembelus_armatus
WBGene00004269rab-6.19976.699ENSMZEG00005023181rab6a9876.699Maylandia_zebra
WBGene00004269rab-6.19976.699ENSMICG00000031565RAB6A9876.699Microcebus_murinus
WBGene00004269rab-6.19976.699ENSMOCG00000014387Rab6a9876.699Microtus_ochrogaster
WBGene00004269rab-6.19975.243ENSMMOG00000016209rab6a9875.243Mola_mola
WBGene00004269rab-6.18783.708ENSMMOG00000001992rab418083.708Mola_mola
WBGene00004269rab-6.19976.214ENSMODG00000007600RAB6A9876.214Monodelphis_domestica
WBGene00004269rab-6.18783.708ENSMALG00000010549rab418383.708Monopterus_albus
WBGene00004269rab-6.19977.295ENSMALG00000020364-9877.295Monopterus_albus
WBGene00004269rab-6.19976.214MGP_CAROLIEiJ_G0030051Rab6a9876.214Mus_caroli
WBGene00004269rab-6.19976.214ENSMUSG00000030704Rab6a9876.214Mus_musculus
WBGene00004269rab-6.19976.214MGP_PahariEiJ_G0013273Rab6a9876.214Mus_pahari
WBGene00004269rab-6.19976.214MGP_SPRETEiJ_G0031162Rab6a9876.214Mus_spretus
WBGene00004269rab-6.19976.699ENSMPUG00000009724RAB6A9876.699Mustela_putorius_furo
WBGene00004269rab-6.19976.214ENSNGAG00000014566Rab6a9876.214Nannospalax_galili
WBGene00004269rab-6.19976.699ENSNBRG00000016716rab6a9876.699Neolamprologus_brichardi
WBGene00004269rab-6.18783.708ENSNBRG00000022702rab418383.708Neolamprologus_brichardi
WBGene00004269rab-6.19976.699ENSNLEG00000017098RAB6A9876.699Nomascus_leucogenys
WBGene00004269rab-6.19976.214ENSMEUG00000010026RAB6A9876.214Notamacropus_eugenii
WBGene00004269rab-6.18586.782ENSOPRG00000010355RAB6A9286.782Ochotona_princeps
WBGene00004269rab-6.19976.214ENSODEG00000005942RAB6A9876.214Octodon_degus
WBGene00004269rab-6.19976.699ENSONIG00000004394rab6a9876.699Oreochromis_niloticus
WBGene00004269rab-6.19976.699ENSOCUG00000009297RAB6A9876.699Oryctolagus_cuniculus
WBGene00004269rab-6.19971.831ENSORLG00000000937-9871.831Oryzias_latipes
WBGene00004269rab-6.19976.699ENSORLG00000026197rab6a9876.699Oryzias_latipes
WBGene00004269rab-6.19180.319ENSORLG00020000604rab418383.146Oryzias_latipes_hni
WBGene00004269rab-6.19976.699ENSORLG00020001816rab6a9876.699Oryzias_latipes_hni
WBGene00004269rab-6.19976.699ENSORLG00015006162rab6a9876.699Oryzias_latipes_hsok
WBGene00004269rab-6.19976.699ENSOMEG00000004379-9876.699Oryzias_melastigma
WBGene00004269rab-6.19976.699ENSOGAG00000027043RAB6A9876.699Otolemur_garnettii
WBGene00004269rab-6.19976.699ENSOARG00000007994RAB6A9876.699Ovis_aries
WBGene00004269rab-6.19976.699ENSPPAG00000011436RAB6A9876.699Pan_paniscus
WBGene00004269rab-6.19976.699ENSPPRG00000009543RAB6A9876.699Panthera_pardus
WBGene00004269rab-6.19976.699ENSPTRG00000044137RAB6A9876.699Pan_troglodytes
WBGene00004269rab-6.19976.699ENSPANG00000014356RAB6A9876.699Papio_anubis
WBGene00004269rab-6.18777.720ENSPKIG00000018584rab419177.720Paramormyrops_kingsleyae
WBGene00004269rab-6.19976.699ENSPMGG00000010067-9876.699Periophthalmus_magnuspinnatus
WBGene00004269rab-6.19976.699ENSPFOG00000019509rab6a9876.699Poecilia_formosa
WBGene00004269rab-6.18783.708ENSPLAG00000000376rab418383.708Poecilia_latipinna
WBGene00004269rab-6.19976.699ENSPLAG00000019570rab6a9876.699Poecilia_latipinna
WBGene00004269rab-6.18783.708ENSPMEG00000014170rab418383.708Poecilia_mexicana
WBGene00004269rab-6.19976.699ENSPMEG00000003369rab6a9876.699Poecilia_mexicana
WBGene00004269rab-6.19976.699ENSPREG00000021505rab6a9876.699Poecilia_reticulata
WBGene00004269rab-6.19976.699ENSPPYG00000003663RAB6A9876.699Pongo_abelii
WBGene00004269rab-6.18586.782ENSPCAG00000006752RAB6A9386.782Procavia_capensis
WBGene00004269rab-6.19976.699ENSPCOG00000021991RAB6A9876.699Propithecus_coquereli
WBGene00004269rab-6.19976.699ENSPVAG00000017342RAB6A9876.699Pteropus_vampyrus
WBGene00004269rab-6.19976.699ENSPNYG00000020556rab6a9876.699Pundamilia_nyererei
WBGene00004269rab-6.18783.708ENSPNYG00000013288rab418383.708Pundamilia_nyererei
WBGene00004269rab-6.19278.756ENSPNAG00000021737rab419178.756Pygocentrus_nattereri
WBGene00004269rab-6.19976.214ENSRNOG00000018176Rab6a9876.214Rattus_norvegicus
WBGene00004269rab-6.19976.699ENSRBIG00000030390RAB6A9876.699Rhinopithecus_bieti
WBGene00004269rab-6.19976.699ENSRROG00000042103RAB6A9876.699Rhinopithecus_roxellana
WBGene00004269rab-6.19963.107ENSSBOG00000028389RAB6A9863.107Saimiri_boliviensis_boliviensis
WBGene00004269rab-6.18784.270ENSSFOG00015004941rab418284.270Scleropages_formosus
WBGene00004269rab-6.19977.184ENSSFOG00015002077rab6a9877.184Scleropages_formosus
WBGene00004269rab-6.18783.708ENSSMAG00000015774rab418383.708Scophthalmus_maximus
WBGene00004269rab-6.19776.961ENSSMAG00000017205-9874.757Scophthalmus_maximus
WBGene00004269rab-6.19976.699ENSSDUG00000013496-9876.699Seriola_dumerili
WBGene00004269rab-6.19976.699ENSSLDG00000015289-9876.699Seriola_lalandi_dorsalis
WBGene00004269rab-6.18783.708ENSSLDG00000022282rab418383.708Seriola_lalandi_dorsalis
WBGene00004269rab-6.19976.214ENSSPUG00000017301RAB6A9876.214Sphenodon_punctatus
WBGene00004269rab-6.19874.634ENSSPUG00000001533-9574.634Sphenodon_punctatus
WBGene00004269rab-6.18783.708ENSSPAG00000006001rab418383.708Stegastes_partitus
WBGene00004269rab-6.19977.295ENSSPAG00000001067-9877.295Stegastes_partitus
WBGene00004269rab-6.19976.699ENSSSCG00000014828RAB6A9876.699Sus_scrofa
WBGene00004269rab-6.19976.699ENSTGUG00000013470RAB6A9876.699Taeniopygia_guttata
WBGene00004269rab-6.18783.708ENSTRUG00000009223rab418383.708Takifugu_rubripes
WBGene00004269rab-6.19976.214ENSTRUG00000023252rab6a9876.214Takifugu_rubripes
WBGene00004269rab-6.19976.214ENSTTRG00000005374RAB6A9876.214Tursiops_truncatus
WBGene00004269rab-6.19973.786ENSUMAG00000010248RAB6A8887.730Ursus_maritimus
WBGene00004269rab-6.19976.699ENSVVUG00000024550RAB6A9876.699Vulpes_vulpes
WBGene00004269rab-6.18585.632ENSXETG00000023200rab6a9285.632Xenopus_tropicalis
WBGene00004269rab-6.19967.476ENSXETG00000031363-9867.476Xenopus_tropicalis
WBGene00004269rab-6.19976.699ENSXCOG00000006259rab6a9876.699Xiphophorus_couchianus
WBGene00004269rab-6.19976.699ENSXMAG00000011903rab6a9876.699Xiphophorus_maculatus

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