EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004274 (Gene tree)
Gene ID: -
Gene Symbol: rab-11.1
Alias: -
Full Name: Ras-related protein rab-11.1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1438 bases
Position: chrI:108670-110107
Accession: O01803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F53G12	MMR_HSR1	PF01926.23	2.6e-07	1	1
F53G12	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F53G12.1.2	-	1244	-	F53G12.1.2	211 (aa)	NP_490675	O01803
F53G12.1.1	-	1294	-	F53G12.1.1	211 (aa)	NP_490675	O01803

Gene Model

Click here to download WBGene00004274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004274	rab-11.1	76	36.025	WBGene00004269	rab-6.1	79	36.025
WBGene00004274	rab-11.1	94	40.909	WBGene00004268	rab-5	90	40.909
WBGene00004274	rab-11.1	72	34.868	WBGene00022177	Y71H2AM.12	79	35.669
WBGene00004274	rab-11.1	81	41.477	WBGene00004286	rab-39	77	41.477
WBGene00004274	rab-11.1	98	43.750	WBGene00004284	rab-35	98	43.750
WBGene00004274	rab-11.1	84	39.888	WBGene00019317	K02E10.1	82	39.888
WBGene00004274	rab-11.1	72	34.615	WBGene00002335	let-60	88	36.310
WBGene00004274	rab-11.1	80	51.479	WBGene00006833	unc-108	79	51.479
WBGene00004274	rab-11.1	78	34.545	WBGene00004309	rap-3	80	34.545
WBGene00004274	rab-11.1	79	42.857	WBGene00004282	rab-30	78	42.857
WBGene00004274	rab-11.1	99	49.289	WBGene00004266	rab-1	100	49.289
WBGene00004274	rab-11.1	79	32.934	WBGene00010038	rheb-1	80	32.934
WBGene00004274	rab-11.1	97	36.232	WBGene00004279	rab-21	97	36.232
WBGene00004274	rab-11.1	74	39.490	WBGene00004270	rab-6.2	77	39.490
WBGene00004274	rab-11.1	75	37.423	WBGene00004271	rab-7	78	37.423
WBGene00004274	rab-11.1	95	46.269	WBGene00004276	rab-14	96	46.269
WBGene00004274	rab-11.1	78	40.000	WBGene00004277	rab-18	81	40.000
WBGene00004274	rab-11.1	98	74.757	WBGene00004275	rab-11.2	99	74.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004274	rab-11.1	99	80.556	ENSG00000185236	RAB11B	95	92.353	Homo_sapiens
WBGene00004274	rab-11.1	99	79.452	ENSAMEG00000004955	RAB11B	99	79.452	Ailuropoda_melanoleuca
WBGene00004274	rab-11.1	99	76.442	ENSACIG00000024374	rab11ba	84	76.442	Amphilophus_citrinellus
WBGene00004274	rab-11.1	99	78.802	ENSAOCG00000018050	rab11ba	99	78.802	Amphiprion_ocellaris
WBGene00004274	rab-11.1	99	78.341	ENSAPEG00000009177	rab11ba	99	78.341	Amphiprion_percula
WBGene00004274	rab-11.1	99	79.263	ENSATEG00000023730	rab11ba	99	79.263	Anabas_testudineus
WBGene00004274	rab-11.1	99	80.556	ENSANAG00000037616	RAB11B	95	92.353	Aotus_nancymaae
WBGene00004274	rab-11.1	99	77.880	ENSACLG00000005420	rab11ba	99	77.880	Astatotilapia_calliptera
WBGene00004274	rab-11.1	91	77.720	ENSACLG00000018852	-	87	77.720	Astatotilapia_calliptera
WBGene00004274	rab-11.1	99	80.556	ENSCJAG00000010778	RAB11B	95	92.353	Callithrix_jacchus
WBGene00004274	rab-11.1	99	80.556	ENSCAFG00000032060	RAB11B	99	80.556	Canis_familiaris
WBGene00004274	rab-11.1	99	80.556	ENSCAFG00020022184	RAB11B	99	80.556	Canis_lupus_dingo
WBGene00004274	rab-11.1	99	80.556	ENSTSYG00000014758	RAB11B	99	80.556	Carlito_syrichta
WBGene00004274	rab-11.1	99	80.556	ENSCPOG00000030154	RAB11B	99	80.556	Cavia_porcellus
WBGene00004274	rab-11.1	99	80.556	ENSCCAG00000031042	RAB11B	94	92.353	Cebus_capucinus
WBGene00004274	rab-11.1	99	80.556	ENSCLAG00000003207	RAB11B	99	80.556	Chinchilla_lanigera
WBGene00004274	rab-11.1	99	80.556	ENSCSAG00000008024	RAB11B	99	80.556	Chlorocebus_sabaeus
WBGene00004274	rab-11.1	99	67.130	ENSCHOG00000013525	RAB11B	99	67.130	Choloepus_hoffmanni
WBGene00004274	rab-11.1	99	79.907	ENSCING00000009526	-	99	79.907	Ciona_intestinalis
WBGene00004274	rab-11.1	99	80.556	ENSCANG00000040517	RAB11B	99	80.556	Colobus_angolensis_palliatus
WBGene00004274	rab-11.1	99	80.556	ENSCGRG00001013827	Rab11b	99	80.556	Cricetulus_griseus_chok1gshd
WBGene00004274	rab-11.1	99	80.556	ENSCGRG00000010967	Rab11b	99	80.556	Cricetulus_griseus_crigri
WBGene00004274	rab-11.1	99	79.263	ENSCSEG00000007121	rab11ba	83	79.263	Cynoglossus_semilaevis
WBGene00004274	rab-11.1	99	80.556	ENSDARG00000041878	rab11ba	99	80.556	Danio_rerio
WBGene00004274	rab-11.1	99	78.704	ENSDNOG00000004134	-	99	78.704	Dasypus_novemcinctus
WBGene00004274	rab-11.1	99	80.556	ENSDNOG00000014618	RAB11B	96	80.556	Dasypus_novemcinctus
WBGene00004274	rab-11.1	99	80.093	ENSDORG00000006304	Rab11b	99	80.093	Dipodomys_ordii
WBGene00004274	rab-11.1	99	79.167	ENSEBUG00000011775	rab11ba	97	79.167	Eptatretus_burgeri
WBGene00004274	rab-11.1	99	73.364	ENSEBUG00000015447	-	99	73.364	Eptatretus_burgeri
WBGene00004274	rab-11.1	68	93.706	ENSEEUG00000009165	-	100	93.706	Erinaceus_europaeus
WBGene00004274	rab-11.1	88	88.172	ENSELUG00000019240	-	95	88.172	Esox_lucius
WBGene00004274	rab-11.1	99	80.556	ENSFCAG00000015216	RAB11B	99	80.556	Felis_catus
WBGene00004274	rab-11.1	99	80.556	ENSFDAG00000019872	RAB11B	99	80.556	Fukomys_damarensis
WBGene00004274	rab-11.1	99	78.802	ENSFHEG00000022642	rab11ba	99	78.802	Fundulus_heteroclitus
WBGene00004274	rab-11.1	99	78.241	ENSGMOG00000007390	rab11ba	98	78.241	Gadus_morhua
WBGene00004274	rab-11.1	99	78.341	ENSGAFG00000005679	rab11ba	99	78.341	Gambusia_affinis
WBGene00004274	rab-11.1	99	80.556	ENSGAGG00000012557	-	99	80.556	Gopherus_agassizii
WBGene00004274	rab-11.1	99	80.556	ENSHGLG00000014984	RAB11B	99	80.556	Heterocephalus_glaber_female
WBGene00004274	rab-11.1	99	80.556	ENSHGLG00100003638	RAB11B	99	80.556	Heterocephalus_glaber_male
WBGene00004274	rab-11.1	99	80.556	ENSSTOG00000031571	RAB11B	99	80.556	Ictidomys_tridecemlineatus
WBGene00004274	rab-11.1	99	80.556	ENSJJAG00000018891	Rab11b	99	80.556	Jaculus_jaculus
WBGene00004274	rab-11.1	99	78.802	ENSKMAG00000006082	-	99	78.802	Kryptolebias_marmoratus
WBGene00004274	rab-11.1	99	79.070	ENSLBEG00000006087	rab11ba	99	79.070	Labrus_bergylta
WBGene00004274	rab-11.1	81	92.353	ENSLACG00000016974	RAB11B	99	92.353	Latimeria_chalumnae
WBGene00004274	rab-11.1	99	80.556	ENSLAFG00000013598	RAB11B	99	80.556	Loxodonta_africana
WBGene00004274	rab-11.1	99	80.556	ENSMNEG00000039759	-	99	80.556	Macaca_nemestrina
WBGene00004274	rab-11.1	99	78.341	ENSMAMG00000018556	rab11ba	99	78.341	Mastacembelus_armatus
WBGene00004274	rab-11.1	91	77.720	ENSMZEG00005019251	-	87	77.720	Maylandia_zebra
WBGene00004274	rab-11.1	99	77.880	ENSMZEG00005010947	rab11ba	99	77.880	Maylandia_zebra
WBGene00004274	rab-11.1	99	80.556	ENSMAUG00000021579	Rab11b	99	80.556	Mesocricetus_auratus
WBGene00004274	rab-11.1	99	80.556	ENSMOCG00000012667	Rab11b	99	80.556	Microtus_ochrogaster
WBGene00004274	rab-11.1	99	77.315	ENSMALG00000021949	rab11ba	99	77.315	Monopterus_albus
WBGene00004274	rab-11.1	99	80.556	MGP_CAROLIEiJ_G0021415	Rab11b	97	93.103	Mus_caroli
WBGene00004274	rab-11.1	99	80.556	ENSMUSG00000077450	Rab11b	97	93.103	Mus_musculus
WBGene00004274	rab-11.1	99	80.556	MGP_PahariEiJ_G0020420	Rab11b	99	80.556	Mus_pahari
WBGene00004274	rab-11.1	99	80.556	MGP_SPRETEiJ_G0022327	Rab11b	97	93.103	Mus_spretus
WBGene00004274	rab-11.1	99	80.556	ENSMPUG00000007263	RAB11B	99	80.556	Mustela_putorius_furo
WBGene00004274	rab-11.1	99	76.256	ENSMLUG00000002308	-	99	76.256	Myotis_lucifugus
WBGene00004274	rab-11.1	99	80.556	ENSNGAG00000015757	Rab11b	99	80.556	Nannospalax_galili
WBGene00004274	rab-11.1	99	78.341	ENSNBRG00000023898	rab11ba	82	78.341	Neolamprologus_brichardi
WBGene00004274	rab-11.1	99	80.556	ENSNLEG00000001733	RAB11B	99	80.556	Nomascus_leucogenys
WBGene00004274	rab-11.1	99	80.556	ENSODEG00000011371	RAB11B	99	80.556	Octodon_degus
WBGene00004274	rab-11.1	99	78.802	ENSONIG00000002535	rab11ba	99	78.802	Oreochromis_niloticus
WBGene00004274	rab-11.1	74	92.357	ENSOCUG00000028208	RAB11B	70	81.283	Oryctolagus_cuniculus
WBGene00004274	rab-11.1	99	78.802	ENSORLG00000015307	rab11ba	99	78.802	Oryzias_latipes
WBGene00004274	rab-11.1	99	78.802	ENSORLG00020020816	rab11ba	99	78.802	Oryzias_latipes_hni
WBGene00004274	rab-11.1	99	78.802	ENSORLG00015016946	rab11ba	81	78.802	Oryzias_latipes_hsok
WBGene00004274	rab-11.1	99	78.802	ENSOMEG00000002581	rab11ba	99	78.802	Oryzias_melastigma
WBGene00004274	rab-11.1	99	80.556	ENSOGAG00000003227	RAB11B	98	80.556	Otolemur_garnettii
WBGene00004274	rab-11.1	99	80.556	ENSOARG00000003801	RAB11B	96	80.556	Ovis_aries
WBGene00004274	rab-11.1	81	92.353	ENSPPRG00000010160	RAB11B	83	92.353	Panthera_pardus
WBGene00004274	rab-11.1	99	80.556	ENSPEMG00000014536	Rab11b	99	80.556	Peromyscus_maniculatus_bairdii
WBGene00004274	rab-11.1	93	75.481	ENSPMAG00000009335	-	99	75.481	Petromyzon_marinus
WBGene00004274	rab-11.1	99	78.802	ENSPFOG00000006159	rab11ba	99	78.802	Poecilia_formosa
WBGene00004274	rab-11.1	99	78.802	ENSPLAG00000014243	rab11ba	99	78.802	Poecilia_latipinna
WBGene00004274	rab-11.1	99	78.802	ENSPMEG00000007917	rab11ba	74	78.802	Poecilia_mexicana
WBGene00004274	rab-11.1	99	78.802	ENSPREG00000006357	rab11ba	77	78.802	Poecilia_reticulata
WBGene00004274	rab-11.1	99	80.556	ENSPPYG00000009504	RAB11B	99	80.556	Pongo_abelii
WBGene00004274	rab-11.1	99	73.148	ENSPCAG00000016118	RAB11B	99	73.148	Procavia_capensis
WBGene00004274	rab-11.1	99	80.556	ENSPCOG00000028053	RAB11B	93	92.353	Propithecus_coquereli
WBGene00004274	rab-11.1	69	91.096	ENSPCOG00000008655	-	100	91.096	Propithecus_coquereli
WBGene00004274	rab-11.1	99	80.556	ENSPVAG00000009645	RAB11B	99	80.556	Pteropus_vampyrus
WBGene00004274	rab-11.1	99	77.880	ENSPNYG00000019644	rab11ba	99	77.880	Pundamilia_nyererei
WBGene00004274	rab-11.1	91	68.205	ENSPNYG00000023810	-	85	68.205	Pundamilia_nyererei
WBGene00004274	rab-11.1	99	79.630	ENSPNAG00000006431	-	99	79.630	Pygocentrus_nattereri
WBGene00004274	rab-11.1	99	80.093	ENSPNAG00000020475	rab11ba	99	80.093	Pygocentrus_nattereri
WBGene00004274	rab-11.1	99	81.019	ENSRNOG00000007648	Rab11b	99	81.019	Rattus_norvegicus
WBGene00004274	rab-11.1	99	80.556	ENSSBOG00000035094	RAB11B	95	92.353	Saimiri_boliviensis_boliviensis
WBGene00004274	rab-11.1	99	78.802	ENSSDUG00000002965	rab11ba	99	78.802	Seriola_dumerili
WBGene00004274	rab-11.1	99	78.802	ENSSLDG00000005221	rab11ba	99	78.802	Seriola_lalandi_dorsalis
WBGene00004274	rab-11.1	99	78.802	ENSSPAG00000017313	rab11ba	99	78.802	Stegastes_partitus
WBGene00004274	rab-11.1	99	80.556	ENSSSCG00000013600	RAB11B	99	80.556	Sus_scrofa
WBGene00004274	rab-11.1	61	93.798	ENSTBEG00000014750	-	100	93.798	Tupaia_belangeri
WBGene00004274	rab-11.1	99	80.556	ENSTTRG00000009758	RAB11B	99	80.556	Tursiops_truncatus
WBGene00004274	rab-11.1	64	91.852	ENSUMAG00000014594	RAB11B	66	91.852	Ursus_maritimus
WBGene00004274	rab-11.1	99	80.556	ENSVVUG00000025210	RAB11B	99	80.556	Vulpes_vulpes
WBGene00004274	rab-11.1	99	79.630	ENSXETG00000021890	rab11b.2	98	79.630	Xenopus_tropicalis
WBGene00004274	rab-11.1	63	93.985	ENSXCOG00000009194	-	98	93.985	Xiphophorus_couchianus
WBGene00004274	rab-11.1	99	78.341	ENSXMAG00000013416	rab11ba	99	78.341	Xiphophorus_maculatus