EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004275 (Gene tree)
Gene ID: -
Gene Symbol: rab-11.2
Alias: -
Full Name: RAB family
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 5490 bases
Position: chrI:11633002-11638491
Accession: Q1ZXR4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
W04G5	MMR_HSR1	PF01926.23	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
W04G5.2a	-	597	NM_001264762	W04G5.2a	198 (aa)	NP_001251691	Q1ZXR4
W04G5.2c	-	588	NR_101628	-	- (aa)	-	-
W04G5.2b	-	685	NR_050594	-	- (aa)	-	-

Gene Model

Click here to download WBGene00004275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004275	rab-11.2	75	30.968	WBGene00002335	let-60	88	32.335
WBGene00004275	rab-11.2	87	47.429	WBGene00006833	unc-108	82	47.429
WBGene00004275	rab-11.2	94	34.375	WBGene00004269	rab-6.1	94	34.375
WBGene00004275	rab-11.2	99	74.757	WBGene00004274	rab-11.1	98	74.757
WBGene00004275	rab-11.2	96	44.279	WBGene00004276	rab-14	96	44.279
WBGene00004275	rab-11.2	83	37.725	WBGene00004279	rab-21	81	37.725
WBGene00004275	rab-11.2	81	38.037	WBGene00004277	rab-18	80	38.037
WBGene00004275	rab-11.2	89	31.694	WBGene00004271	rab-7	88	31.694
WBGene00004275	rab-11.2	78	40.127	WBGene00004270	rab-6.2	77	40.127
WBGene00004275	rab-11.2	97	38.095	WBGene00004282	rab-30	97	38.095
WBGene00004275	rab-11.2	97	39.109	WBGene00004284	rab-35	96	39.109
WBGene00004275	rab-11.2	87	37.989	WBGene00004286	rab-39	78	37.989
WBGene00004275	rab-11.2	95	36.842	WBGene00004268	rab-5	90	36.842
WBGene00004275	rab-11.2	84	50.296	WBGene00004266	rab-1	82	50.296
WBGene00004275	rab-11.2	80	31.056	WBGene00010038	rheb-1	77	31.056
WBGene00004275	rab-11.2	78	32.903	WBGene00022177	Y71H2AM.12	79	34.194
WBGene00004275	rab-11.2	85	38.596	WBGene00019317	K02E10.1	78	38.596
WBGene00004275	rab-11.2	81	34.356	WBGene00004309	rap-3	79	34.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004275	rab-11.2	84	48.810	ENSCING00000005409	-	75	48.810	Ciona_intestinalis
WBGene00004275	rab-11.2	84	46.429	ENSCSAVG00000005120	-	70	46.429	Ciona_savignyi
WBGene00004275	rab-11.2	96	53.807	YER031C	YPT31	88	53.807	Saccharomyces_cerevisiae
WBGene00004275	rab-11.2	96	57.216	YGL210W	-	87	57.216	Saccharomyces_cerevisiae