EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004277 (Gene tree)
Gene ID: -
Gene Symbol: rab-18
Alias: -
Full Name: Ras-related protein Rab-18
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2626 bases
Position: chrIII:1078150-1080775
Accession: Q8MXS1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y92C3B	GTP_EFTU	PF00009.27	2.7e-08	1	1
Y92C3B	MMR_HSR1	PF01926.23	6.9e-06	1	1
Y92C3B	MMR_HSR1	PF01926.23	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y92C3B.3a	-	2113	-	Y92C3B.3a	193 (aa)	NP_741093	UPI00001A2EFA
Y92C3B.3b.1	-	2059	-	Y92C3B.3b.1	203 (aa)	NP_741092	Q8MXS1
Y92C3B.3b.2	-	1918	-	Y92C3B.3b.2	203 (aa)	NP_741092	Q8MXS1

Gene Model

Click here to download WBGene00004277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004277	rab-18	83	30.061	WBGene00004309	rap-3	79	34.356
WBGene00004277	rab-18	88	43.716	WBGene00006833	unc-108	85	43.716
WBGene00004277	rab-18	80	38.037	WBGene00004275	rab-11.2	81	38.037
WBGene00004277	rab-18	81	42.424	WBGene00004276	rab-14	78	42.683
WBGene00004277	rab-18	81	40.000	WBGene00004274	rab-11.1	78	40.000
WBGene00004277	rab-18	86	35.000	WBGene00004271	rab-7	86	35.000
WBGene00004277	rab-18	81	43.373	WBGene00004270	rab-6.2	80	43.373
WBGene00004277	rab-18	86	39.429	WBGene00004279	rab-21	84	39.429
WBGene00004277	rab-18	85	30.857	WBGene00010038	rheb-1	84	30.857
WBGene00004277	rab-18	87	30.682	WBGene00002335	let-60	95	30.682
WBGene00004277	rab-18	90	40.761	WBGene00004268	rab-5	79	42.771
WBGene00004277	rab-18	100	36.019	WBGene00004269	rab-6.1	82	39.645
WBGene00004277	rab-18	99	35.268	WBGene00004286	rab-39	77	39.205
WBGene00004277	rab-18	95	42.786	WBGene00004284	rab-35	73	49.677
WBGene00004277	rab-18	97	34.574	WBGene00004282	rab-30	82	38.202
WBGene00004277	rab-18	79	35.714	WBGene00019317	K02E10.1	69	39.610
WBGene00004277	rab-18	94	42.051	WBGene00004266	rab-1	79	45.679
WBGene00004277	rab-18	87	34.615	WBGene00007067	4R79.2	58	34.615
WBGene00004277	rab-18	73	34.211	WBGene00022177	Y71H2AM.12	80	33.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004277	rab-18	92	54.839	ENSACAG00000028613	-	87	54.839	Anolis_carolinensis
WBGene00004277	rab-18	81	55.152	FBgn0015794	Rab18	83	55.152	Drosophila_melanogaster