EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004282 (Gene tree)
Gene ID: -
Gene Symbol: rab-30
Alias: -
Full Name: RAB family
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2578 bases
Position: chrIII:10563026-10565603
Accession: Q9XWZ3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y45F3A	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y45F3A.2	-	988	-	Y45F3A.2	216 (aa)	NP_499328	I7FW43

Gene Model

Click here to download WBGene00004282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004282	rab-30	75	39.506	WBGene00004268	rab-5	77	39.506
WBGene00004282	rab-30	75	41.718	WBGene00004269	rab-6.1	79	41.718
WBGene00004282	rab-30	79	47.674	WBGene00004266	rab-1	83	47.674
WBGene00004282	rab-30	95	34.634	WBGene00004309	rap-3	94	34.634
WBGene00004282	rab-30	72	30.573	WBGene00010038	rheb-1	74	30.573
WBGene00004282	rab-30	75	39.181	WBGene00007067	4R79.2	53	39.181
WBGene00004282	rab-30	72	39.103	WBGene00022177	Y71H2AM.12	81	40.373
WBGene00004282	rab-30	61	32.593	WBGene00000192	arl-8	71	32.593
WBGene00004282	rab-30	78	33.526	WBGene00004286	rab-39	75	33.526
WBGene00004282	rab-30	90	41.753	WBGene00004284	rab-35	89	41.753
WBGene00004282	rab-30	75	37.349	WBGene00004271	rab-7	79	37.349
WBGene00004282	rab-30	97	35.648	WBGene00019317	K02E10.1	95	35.648
WBGene00004282	rab-30	77	40.476	WBGene00004270	rab-6.2	81	40.476
WBGene00004282	rab-30	82	38.202	WBGene00004277	rab-18	97	34.574
WBGene00004282	rab-30	80	40.698	WBGene00004276	rab-14	81	40.698
WBGene00004282	rab-30	97	38.095	WBGene00004275	rab-11.2	97	38.095
WBGene00004282	rab-30	78	42.857	WBGene00004274	rab-11.1	79	42.857
WBGene00004282	rab-30	97	31.579	WBGene00004279	rab-21	95	31.579
WBGene00004282	rab-30	97	37.089	WBGene00006833	unc-108	77	43.976

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004282	rab-30	81	63.218	ENSG00000137502	RAB30	98	77.551	Homo_sapiens
WBGene00004282	rab-30	81	65.517	ENSAPOG00000022625	rab30	85	65.517	Acanthochromis_polyacanthus
WBGene00004282	rab-30	81	63.218	ENSAMEG00000005231	RAB30	85	63.218	Ailuropoda_melanoleuca
WBGene00004282	rab-30	81	65.517	ENSAOCG00000012556	rab30	62	65.517	Amphiprion_ocellaris
WBGene00004282	rab-30	81	65.517	ENSAPEG00000012044	rab30	85	65.517	Amphiprion_percula
WBGene00004282	rab-30	81	65.517	ENSATEG00000010475	rab30	85	65.517	Anabas_testudineus
WBGene00004282	rab-30	81	63.793	ENSACAG00000001098	RAB30	85	63.793	Anolis_carolinensis
WBGene00004282	rab-30	81	63.218	ENSANAG00000029292	RAB30	85	63.218	Aotus_nancymaae
WBGene00004282	rab-30	81	64.943	ENSACLG00000023526	rab30	85	64.943	Astatotilapia_calliptera
WBGene00004282	rab-30	81	64.943	ENSAMXG00000009935	rab30	70	64.943	Astyanax_mexicanus
WBGene00004282	rab-30	81	63.218	ENSBTAG00000002417	RAB30	85	63.218	Bos_taurus
WBGene00004282	rab-30	81	63.218	ENSCJAG00000041773	RAB30	85	63.218	Callithrix_jacchus
WBGene00004282	rab-30	81	63.218	ENSCAFG00000004616	RAB30	85	63.218	Canis_familiaris
WBGene00004282	rab-30	81	63.218	ENSCAFG00020017865	RAB30	85	63.218	Canis_lupus_dingo
WBGene00004282	rab-30	81	63.218	ENSCHIG00000020601	RAB30	85	63.218	Capra_hircus
WBGene00004282	rab-30	81	63.218	ENSTSYG00000009392	RAB30	85	63.218	Carlito_syrichta
WBGene00004282	rab-30	81	63.218	ENSCAPG00000009331	RAB30	85	63.218	Cavia_aperea
WBGene00004282	rab-30	81	63.218	ENSCPOG00000005047	RAB30	85	63.218	Cavia_porcellus
WBGene00004282	rab-30	81	63.218	ENSCCAG00000026824	RAB30	85	63.218	Cebus_capucinus
WBGene00004282	rab-30	81	63.218	ENSCATG00000040441	RAB30	85	63.218	Cercocebus_atys
WBGene00004282	rab-30	81	63.218	ENSCLAG00000014030	RAB30	85	63.218	Chinchilla_lanigera
WBGene00004282	rab-30	81	63.218	ENSCSAG00000003704	RAB30	85	63.218	Chlorocebus_sabaeus
WBGene00004282	rab-30	81	63.218	ENSCPBG00000006855	RAB30	85	63.218	Chrysemys_picta_bellii
WBGene00004282	rab-30	81	63.218	ENSCANG00000022240	RAB30	85	63.218	Colobus_angolensis_palliatus
WBGene00004282	rab-30	81	63.218	ENSCGRG00001021787	Rab30	85	63.218	Cricetulus_griseus_chok1gshd
WBGene00004282	rab-30	81	63.218	ENSCGRG00000014842	Rab30	85	63.218	Cricetulus_griseus_crigri
WBGene00004282	rab-30	99	57.746	ENSCSEG00000007292	rab30	98	57.746	Cynoglossus_semilaevis
WBGene00004282	rab-30	81	65.517	ENSCVAG00000018085	rab30	85	65.517	Cyprinodon_variegatus
WBGene00004282	rab-30	81	65.517	ENSDARG00000037884	rab30	86	65.517	Danio_rerio
WBGene00004282	rab-30	81	63.218	ENSDNOG00000039115	RAB30	85	63.218	Dasypus_novemcinctus
WBGene00004282	rab-30	81	63.218	ENSDORG00000015066	-	85	63.218	Dipodomys_ordii
WBGene00004282	rab-30	81	63.793	ENSDORG00000010504	-	85	63.793	Dipodomys_ordii
WBGene00004282	rab-30	82	70.621	FBgn0031882	Rab30	94	62.085	Drosophila_melanogaster
WBGene00004282	rab-30	81	63.218	ENSEASG00005012754	RAB30	85	63.218	Equus_asinus_asinus
WBGene00004282	rab-30	81	63.218	ENSECAG00000022769	RAB30	93	63.218	Equus_caballus
WBGene00004282	rab-30	81	64.943	ENSELUG00000022997	rab30	86	64.943	Esox_lucius
WBGene00004282	rab-30	81	63.218	ENSFCAG00000014416	RAB30	85	63.218	Felis_catus
WBGene00004282	rab-30	81	63.793	ENSFALG00000007765	RAB30	85	63.793	Ficedula_albicollis
WBGene00004282	rab-30	81	63.218	ENSFDAG00000014521	RAB30	85	63.218	Fukomys_damarensis
WBGene00004282	rab-30	81	65.517	ENSFHEG00000013918	rab30	85	65.517	Fundulus_heteroclitus
WBGene00004282	rab-30	81	64.368	ENSGMOG00000002552	rab30	85	64.368	Gadus_morhua
WBGene00004282	rab-30	81	63.793	ENSGALG00000017248	RAB30	85	63.793	Gallus_gallus
WBGene00004282	rab-30	81	65.517	ENSGAFG00000020309	rab30	91	65.517	Gambusia_affinis
WBGene00004282	rab-30	81	64.943	ENSGACG00000012006	rab30	87	64.943	Gasterosteus_aculeatus
WBGene00004282	rab-30	81	63.218	ENSGAGG00000004474	RAB30	85	63.218	Gopherus_agassizii
WBGene00004282	rab-30	81	63.218	ENSGGOG00000017157	RAB30	85	63.218	Gorilla_gorilla
WBGene00004282	rab-30	81	64.943	ENSHBUG00000000993	rab30	79	64.943	Haplochromis_burtoni
WBGene00004282	rab-30	81	63.218	ENSHGLG00000002759	RAB30	85	63.218	Heterocephalus_glaber_female
WBGene00004282	rab-30	81	63.218	ENSHGLG00100001213	RAB30	85	63.218	Heterocephalus_glaber_male
WBGene00004282	rab-30	55	76.471	ENSHCOG00000010707	rab30	64	76.471	Hippocampus_comes
WBGene00004282	rab-30	81	64.368	ENSIPUG00000021010	Rab30	86	64.368	Ictalurus_punctatus
WBGene00004282	rab-30	81	63.218	ENSSTOG00000020966	RAB30	85	63.218	Ictidomys_tridecemlineatus
WBGene00004282	rab-30	81	63.218	ENSJJAG00000020064	Rab30	85	63.218	Jaculus_jaculus
WBGene00004282	rab-30	81	65.517	ENSKMAG00000004439	rab30	85	65.517	Kryptolebias_marmoratus
WBGene00004282	rab-30	81	64.943	ENSLBEG00000001146	rab30	85	64.943	Labrus_bergylta
WBGene00004282	rab-30	81	63.793	ENSLACG00000006407	RAB30	85	63.793	Latimeria_chalumnae
WBGene00004282	rab-30	81	63.793	ENSLOCG00000005884	rab30	85	63.793	Lepisosteus_oculatus
WBGene00004282	rab-30	81	63.218	ENSLAFG00000010711	RAB30	85	63.218	Loxodonta_africana
WBGene00004282	rab-30	81	63.218	ENSMFAG00000033119	RAB30	85	63.218	Macaca_fascicularis
WBGene00004282	rab-30	81	63.218	ENSMMUG00000007842	RAB30	85	63.218	Macaca_mulatta
WBGene00004282	rab-30	81	63.218	ENSMNEG00000037406	RAB30	85	63.218	Macaca_nemestrina
WBGene00004282	rab-30	81	63.218	ENSMLEG00000039496	RAB30	85	63.218	Mandrillus_leucophaeus
WBGene00004282	rab-30	81	64.943	ENSMAMG00000011973	rab30	85	64.943	Mastacembelus_armatus
WBGene00004282	rab-30	81	64.943	ENSMZEG00005024032	rab30	79	64.943	Maylandia_zebra
WBGene00004282	rab-30	81	63.429	ENSMGAG00000015230	RAB30	85	63.429	Meleagris_gallopavo
WBGene00004282	rab-30	81	63.218	ENSMAUG00000008179	Rab30	85	63.218	Mesocricetus_auratus
WBGene00004282	rab-30	81	63.218	ENSMICG00000012002	RAB30	85	63.218	Microcebus_murinus
WBGene00004282	rab-30	81	63.218	ENSMOCG00000009821	-	85	63.218	Microtus_ochrogaster
WBGene00004282	rab-30	81	65.517	ENSMMOG00000000304	rab30	85	65.517	Mola_mola
WBGene00004282	rab-30	81	63.218	ENSMODG00000004506	RAB30	85	63.218	Monodelphis_domestica
WBGene00004282	rab-30	81	64.943	ENSMALG00000010438	rab30	85	64.943	Monopterus_albus
WBGene00004282	rab-30	81	62.644	MGP_CAROLIEiJ_G0029992	Rab30	85	62.644	Mus_caroli
WBGene00004282	rab-30	81	63.218	ENSMUSG00000030643	Rab30	98	78.095	Mus_musculus
WBGene00004282	rab-30	81	63.218	MGP_PahariEiJ_G0013212	Rab30	85	63.218	Mus_pahari
WBGene00004282	rab-30	81	63.218	MGP_SPRETEiJ_G0031102	Rab30	85	63.218	Mus_spretus
WBGene00004282	rab-30	81	63.218	ENSMPUG00000008088	RAB30	85	63.218	Mustela_putorius_furo
WBGene00004282	rab-30	81	63.218	ENSMLUG00000006552	RAB30	85	63.218	Myotis_lucifugus
WBGene00004282	rab-30	81	63.218	ENSNGAG00000018930	Rab30	85	63.218	Nannospalax_galili
WBGene00004282	rab-30	81	64.943	ENSNBRG00000002082	rab30	79	64.943	Neolamprologus_brichardi
WBGene00004282	rab-30	81	63.218	ENSNLEG00000029364	RAB30	85	63.218	Nomascus_leucogenys
WBGene00004282	rab-30	81	63.218	ENSMEUG00000012886	RAB30	85	63.218	Notamacropus_eugenii
WBGene00004282	rab-30	55	74.576	ENSOPRG00000007511	RAB30	98	74.576	Ochotona_princeps
WBGene00004282	rab-30	81	63.218	ENSODEG00000003833	RAB30	85	63.218	Octodon_degus
WBGene00004282	rab-30	81	64.943	ENSONIG00000005708	rab30	85	64.943	Oreochromis_niloticus
WBGene00004282	rab-30	81	63.218	ENSOCUG00000007580	RAB30	85	63.218	Oryctolagus_cuniculus
WBGene00004282	rab-30	81	64.943	ENSORLG00000029812	rab30	85	64.943	Oryzias_latipes
WBGene00004282	rab-30	81	64.943	ENSORLG00020015288	rab30	85	64.943	Oryzias_latipes_hni
WBGene00004282	rab-30	81	64.943	ENSORLG00015020972	rab30	85	64.943	Oryzias_latipes_hsok
WBGene00004282	rab-30	81	64.943	ENSOMEG00000001613	rab30	85	64.943	Oryzias_melastigma
WBGene00004282	rab-30	81	63.218	ENSOGAG00000033189	RAB30	85	63.218	Otolemur_garnettii
WBGene00004282	rab-30	81	63.218	ENSOARG00000005688	RAB30	85	63.218	Ovis_aries
WBGene00004282	rab-30	81	63.218	ENSPPAG00000031604	RAB30	85	63.218	Pan_paniscus
WBGene00004282	rab-30	81	63.218	ENSPPRG00000023881	RAB30	85	63.218	Panthera_pardus
WBGene00004282	rab-30	81	63.218	ENSPTIG00000009836	RAB30	85	63.218	Panthera_tigris_altaica
WBGene00004282	rab-30	81	63.218	ENSPTRG00000004125	RAB30	85	63.218	Pan_troglodytes
WBGene00004282	rab-30	81	63.218	ENSPANG00000003974	RAB30	85	63.218	Papio_anubis
WBGene00004282	rab-30	81	64.368	ENSPKIG00000015202	rab30	85	64.368	Paramormyrops_kingsleyae
WBGene00004282	rab-30	81	63.218	ENSPSIG00000003078	RAB30	85	63.218	Pelodiscus_sinensis
WBGene00004282	rab-30	81	55.665	ENSPMGG00000016093	rab30	87	56.158	Periophthalmus_magnuspinnatus
WBGene00004282	rab-30	81	63.218	ENSPEMG00000023854	Rab30	85	63.218	Peromyscus_maniculatus_bairdii
WBGene00004282	rab-30	81	63.793	ENSPMAG00000006105	rab30	82	63.793	Petromyzon_marinus
WBGene00004282	rab-30	81	63.218	ENSPCIG00000027547	RAB30	80	63.218	Phascolarctos_cinereus
WBGene00004282	rab-30	81	65.517	ENSPFOG00000005479	rab30	85	65.517	Poecilia_formosa
WBGene00004282	rab-30	81	65.517	ENSPLAG00000015383	rab30	85	65.517	Poecilia_latipinna
WBGene00004282	rab-30	81	65.517	ENSPMEG00000009701	rab30	85	65.517	Poecilia_mexicana
WBGene00004282	rab-30	81	65.517	ENSPREG00000014634	rab30	85	65.517	Poecilia_reticulata
WBGene00004282	rab-30	81	63.218	ENSPPYG00000003733	RAB30	85	63.218	Pongo_abelii
WBGene00004282	rab-30	81	63.218	ENSPCAG00000000574	RAB30	85	63.218	Procavia_capensis
WBGene00004282	rab-30	81	63.218	ENSPCOG00000017316	RAB30	80	68.421	Propithecus_coquereli
WBGene00004282	rab-30	81	63.218	ENSPVAG00000005455	RAB30	85	63.218	Pteropus_vampyrus
WBGene00004282	rab-30	81	65.517	ENSPNYG00000009728	rab30	79	65.517	Pundamilia_nyererei
WBGene00004282	rab-30	81	64.368	ENSPNAG00000010760	rab30	86	64.368	Pygocentrus_nattereri
WBGene00004282	rab-30	81	63.218	ENSRNOG00000010224	Rab30	85	63.218	Rattus_norvegicus
WBGene00004282	rab-30	81	63.218	ENSRBIG00000039227	RAB30	85	63.218	Rhinopithecus_bieti
WBGene00004282	rab-30	81	63.218	ENSRROG00000031260	RAB30	85	63.218	Rhinopithecus_roxellana
WBGene00004282	rab-30	81	63.218	ENSSBOG00000026403	RAB30	85	63.218	Saimiri_boliviensis_boliviensis
WBGene00004282	rab-30	81	62.147	ENSSHAG00000018081	RAB30	85	62.147	Sarcophilus_harrisii
WBGene00004282	rab-30	81	64.943	ENSSMAG00000002500	rab30	86	64.943	Scophthalmus_maximus
WBGene00004282	rab-30	81	64.943	ENSSDUG00000013325	rab30	85	64.943	Seriola_dumerili
WBGene00004282	rab-30	81	64.943	ENSSLDG00000022533	rab30	85	64.943	Seriola_lalandi_dorsalis
WBGene00004282	rab-30	81	63.793	ENSSPUG00000006349	RAB30	85	63.793	Sphenodon_punctatus
WBGene00004282	rab-30	81	64.943	ENSSPAG00000013422	rab30	85	64.943	Stegastes_partitus
WBGene00004282	rab-30	81	63.218	ENSSSCG00000014900	RAB30	85	63.218	Sus_scrofa
WBGene00004282	rab-30	81	63.793	ENSTGUG00000012941	RAB30	85	63.793	Taeniopygia_guttata
WBGene00004282	rab-30	81	64.943	ENSTRUG00000022559	rab30	85	64.943	Takifugu_rubripes
WBGene00004282	rab-30	81	63.218	ENSTBEG00000009832	RAB30	85	63.218	Tupaia_belangeri
WBGene00004282	rab-30	81	63.218	ENSTTRG00000006100	RAB30	85	63.218	Tursiops_truncatus
WBGene00004282	rab-30	81	63.218	ENSUAMG00000009326	RAB30	85	63.218	Ursus_americanus
WBGene00004282	rab-30	81	63.218	ENSUMAG00000023572	RAB30	85	63.218	Ursus_maritimus
WBGene00004282	rab-30	81	63.218	ENSVVUG00000017471	RAB30	85	63.218	Vulpes_vulpes
WBGene00004282	rab-30	98	57.820	ENSXETG00000013633	rab30	98	57.820	Xenopus_tropicalis
WBGene00004282	rab-30	81	65.517	ENSXMAG00000025848	rab30	85	65.517	Xiphophorus_maculatus