EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004284 (Gene tree)
Gene ID: -
Gene Symbol: rab-35
Alias: -
Full Name: RAB family
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 5007 bases
Position: chrIII:11306560-11311566
Accession: Q9U2C3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y47D3A	MMR_HSR1	PF01926.23	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y47D3A.25	-	967	-	Y47D3A.25	209 (aa)	NP_499454	Q9U2C3

Gene Model

Click here to download WBGene00004284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004284	rab-35	96	39.109	WBGene00004275	rab-11.2	97	39.109
WBGene00004284	rab-35	98	43.750	WBGene00004274	rab-11.1	98	43.750
WBGene00004284	rab-35	99	39.252	WBGene00004276	rab-14	99	39.252
WBGene00004284	rab-35	80	42.197	WBGene00004271	rab-7	85	41.573
WBGene00004284	rab-35	73	42.208	WBGene00004270	rab-6.2	75	42.208
WBGene00004284	rab-35	94	35.678	WBGene00004279	rab-21	94	35.678
WBGene00004284	rab-35	73	49.677	WBGene00004277	rab-18	95	42.786
WBGene00004284	rab-35	89	41.753	WBGene00004282	rab-30	90	41.753
WBGene00004284	rab-35	78	41.860	WBGene00004286	rab-39	75	41.860
WBGene00004284	rab-35	75	41.772	WBGene00004268	rab-5	76	41.772
WBGene00004284	rab-35	78	62.805	WBGene00004266	rab-1	80	62.805
WBGene00004284	rab-35	72	37.580	WBGene00022177	Y71H2AM.12	79	37.037
WBGene00004284	rab-35	76	41.875	WBGene00004269	rab-6.1	78	41.875
WBGene00004284	rab-35	75	46.203	WBGene00006833	unc-108	74	46.203
WBGene00004284	rab-35	80	35.503	WBGene00004309	rap-3	81	35.503
WBGene00004284	rab-35	73	35.484	WBGene00002335	let-60	83	35.484
WBGene00004284	rab-35	78	43.902	WBGene00019317	K02E10.1	75	43.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004284	rab-35	97	65.366	ENSCING00000016136	-	95	65.366	Ciona_intestinalis
WBGene00004284	rab-35	75	76.282	ENSCSAVG00000008995	-	98	76.282	Ciona_savignyi
WBGene00004284	rab-35	97	66.176	FBgn0031090	Rab35	99	66.176	Drosophila_melanogaster
WBGene00004284	rab-35	91	70.681	ENSSPUG00000010896	-	99	66.990	Sphenodon_punctatus
WBGene00004284	rab-35	84	69.143	ENSXETG00000011370	rab35	87	69.143	Xenopus_tropicalis