EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004309 (Gene tree)
Gene ID: -
Gene Symbol: rap-3
Alias: -
Full Name: RAP homolog (Vertebrate Rap GTPase family)
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 915 bases
Position: chrIV:11177286-11178200
Accession: O01312
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C08F8	GTP_EFTU	PF00009.27	3.3e-09	1	1
C08F8	MMR_HSR1	PF01926.23	4.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C08F8.7	-	740	NM_069694	C08F8.7	205 (aa)	NP_502095	O01312

Gene Model

Click here to download WBGene00004309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004309	rap-3	82	30.857	WBGene00007067	4R79.2	56	30.857
WBGene00004309	rap-3	81	34.731	WBGene00004266	rab-1	81	34.731
WBGene00004309	rap-3	75	32.903	WBGene00004268	rab-5	75	32.903
WBGene00004309	rap-3	83	32.022	WBGene00004269	rab-6.1	87	32.022
WBGene00004309	rap-3	76	49.045	WBGene00002335	let-60	85	49.045
WBGene00004309	rap-3	75	33.766	WBGene00010038	rheb-1	74	33.766
WBGene00004309	rap-3	81	35.503	WBGene00004284	rab-35	80	35.503
WBGene00004309	rap-3	79	30.952	WBGene00004286	rab-39	73	30.952
WBGene00004309	rap-3	94	34.634	WBGene00004282	rab-30	95	34.634
WBGene00004309	rap-3	74	35.220	WBGene00004271	rab-7	76	35.220
WBGene00004309	rap-3	75	31.646	WBGene00019317	K02E10.1	72	31.646
WBGene00004309	rap-3	77	34.810	WBGene00006833	unc-108	74	34.810
WBGene00004309	rap-3	78	34.161	WBGene00004270	rab-6.2	79	34.161
WBGene00004309	rap-3	79	34.356	WBGene00004275	rab-11.2	81	34.356
WBGene00004309	rap-3	80	34.545	WBGene00004274	rab-11.1	78	34.545
WBGene00004309	rap-3	79	34.356	WBGene00004277	rab-18	83	30.061
WBGene00004309	rap-3	80	32.317	WBGene00004276	rab-14	78	32.317
WBGene00004309	rap-3	76	39.103	WBGene00004279	rab-21	75	39.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004309	rap-3	76	42.767	ENSCSAVG00000009503	-	81	42.767	Ciona_savignyi