EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004373 (Gene tree)
Gene ID: -
Gene Symbol: rme-1
Alias: -
Full Name: Receptor Mediated Endocytosis%3B Receptor-mediated endocytosis 1 isoform I
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 8808 bases
Position: chrV:6208840-6217647
Accession: G5EEU7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
W06H8	MMR_HSR1	PF01926.23	1.6e-08	1	1
W06H8	MMR_HSR1	PF01926.23	1.6e-08	1	1
W06H8	MMR_HSR1	PF01926.23	1.7e-08	1	1
W06H8	MMR_HSR1	PF01926.23	1.8e-08	1	1
W06H8	MMR_HSR1	PF01926.23	1.9e-08	1	1
W06H8	MMR_HSR1	PF01926.23	2.2e-08	1	1
W06H8	MMR_HSR1	PF01926.23	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
W06H8.1b	-	2906	NM_001029021	W06H8.1b	835 (aa)	NP_001024192	G5ECC3
W06H8.1c	-	2197	NM_001029023	W06H8.1c	589 (aa)	NP_001024194	G5EEU7
W06H8.1a	-	2920	NM_001029021	W06H8.1a	786 (aa)	NP_001024192	Q9N5B7
W06H8.1d	-	2128	NM_001029024	W06H8.1d	576 (aa)	NP_001024195	G5EFP1
W06H8.1e	-	2240	NM_001029025	W06H8.1e	613 (aa)	NP_001024196	Q86S80
W06H8.1f.1	-	2634	-	W06H8.1f.1	555 (aa)	-	Q86S80
W06H8.1f.2	-	2088	NM_001029026	W06H8.1f.2	555 (aa)	NP_001024197	Q86S80

Gene Model

Click here to download WBGene00004373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004373	rme-1	97	67.222	ENSG00000110047	EHD1	99	74.534	Homo_sapiens
WBGene00004373	rme-1	96	67.857	ENSAPOG00000013440	ehd1a	98	67.857	Acanthochromis_polyacanthus
WBGene00004373	rme-1	97	67.037	ENSAMEG00000017785	EHD1	96	67.098	Ailuropoda_melanoleuca
WBGene00004373	rme-1	95	68.113	ENSACIG00000022182	ehd1a	98	68.113	Amphilophus_citrinellus
WBGene00004373	rme-1	96	68.233	ENSAOCG00000016322	ehd1a	98	68.233	Amphiprion_ocellaris
WBGene00004373	rme-1	96	68.233	ENSAPEG00000010363	ehd1a	98	68.233	Amphiprion_percula
WBGene00004373	rme-1	95	69.057	ENSATEG00000013980	ehd1a	98	69.057	Anabas_testudineus
WBGene00004373	rme-1	97	67.037	ENSANAG00000034810	EHD1	99	67.037	Aotus_nancymaae
WBGene00004373	rme-1	95	67.925	ENSACLG00000016016	ehd1a	98	67.925	Astatotilapia_calliptera
WBGene00004373	rme-1	98	65.498	ENSAMXG00000031892	-	100	65.498	Astyanax_mexicanus
WBGene00004373	rme-1	98	66.298	ENSAMXG00000039344	ehd1a	99	66.298	Astyanax_mexicanus
WBGene00004373	rme-1	97	67.407	ENSBTAG00000050712	EHD1	99	67.407	Bos_taurus
WBGene00004373	rme-1	97	66.852	ENSCJAG00000002660	EHD1	99	66.852	Callithrix_jacchus
WBGene00004373	rme-1	76	68.868	ENSCAFG00000014128	EHD1	98	65.116	Canis_familiaris
WBGene00004373	rme-1	97	67.407	ENSCAFG00020014846	EHD1	99	67.407	Canis_lupus_dingo
WBGene00004373	rme-1	97	67.407	ENSCHIG00000020707	-	99	67.407	Capra_hircus
WBGene00004373	rme-1	97	67.407	ENSCPOG00000008157	EHD1	99	67.407	Cavia_porcellus
WBGene00004373	rme-1	97	67.037	ENSCCAG00000004590	EHD1	99	67.037	Cebus_capucinus
WBGene00004373	rme-1	97	67.222	ENSCATG00000010658	EHD1	97	67.634	Cercocebus_atys
WBGene00004373	rme-1	97	67.407	ENSCLAG00000016412	EHD1	99	67.407	Chinchilla_lanigera
WBGene00004373	rme-1	97	67.222	ENSCSAG00000007397	EHD1	99	67.222	Chlorocebus_sabaeus
WBGene00004373	rme-1	97	64.870	ENSCPBG00000023692	EHD1	98	64.870	Chrysemys_picta_bellii
WBGene00004373	rme-1	97	67.222	ENSCANG00000042123	EHD1	99	67.222	Colobus_angolensis_palliatus
WBGene00004373	rme-1	97	67.593	ENSCGRG00001019701	Ehd1	99	67.593	Cricetulus_griseus_chok1gshd
WBGene00004373	rme-1	92	67.647	ENSCGRG00000000662	Ehd1	99	67.647	Cricetulus_griseus_crigri
WBGene00004373	rme-1	95	66.792	ENSCSEG00000006078	ehd1a	98	66.792	Cynoglossus_semilaevis
WBGene00004373	rme-1	95	67.925	ENSCVAG00000012152	ehd1a	98	67.925	Cyprinodon_variegatus
WBGene00004373	rme-1	98	66.360	ENSDARG00000098853	ehd1a	100	66.360	Danio_rerio
WBGene00004373	rme-1	97	66.481	ENSDARG00000014793	ehd1b	99	66.481	Danio_rerio
WBGene00004373	rme-1	65	71.389	ENSDNOG00000017834	EHD1	96	71.389	Dasypus_novemcinctus
WBGene00004373	rme-1	97	67.222	ENSDORG00000030186	Ehd1	99	67.222	Dipodomys_ordii
WBGene00004373	rme-1	97	70.795	FBgn0016693	Past1	99	71.058	Drosophila_melanogaster
WBGene00004373	rme-1	55	71.569	ENSEBUG00000010829	EHD1	89	71.569	Eptatretus_burgeri
WBGene00004373	rme-1	97	64.207	ENSEBUG00000009968	EHD1	99	64.207	Eptatretus_burgeri
WBGene00004373	rme-1	97	67.593	ENSEASG00005018250	EHD1	99	67.593	Equus_asinus_asinus
WBGene00004373	rme-1	97	67.593	ENSECAG00000011638	EHD1	99	67.593	Equus_caballus
WBGene00004373	rme-1	97	67.472	ENSELUG00000016093	ehd1b	99	68.113	Esox_lucius
WBGene00004373	rme-1	96	67.481	ENSELUG00000007973	-	98	67.481	Esox_lucius
WBGene00004373	rme-1	97	67.593	ENSFCAG00000027734	EHD1	97	67.652	Felis_catus
WBGene00004373	rme-1	97	67.407	ENSFDAG00000007697	EHD1	99	67.407	Fukomys_damarensis
WBGene00004373	rme-1	95	67.736	ENSFHEG00000002690	ehd1a	98	67.736	Fundulus_heteroclitus
WBGene00004373	rme-1	95	67.547	ENSGMOG00000012192	ehd1a	99	67.547	Gadus_morhua
WBGene00004373	rme-1	95	68.113	ENSGAFG00000000730	ehd1a	98	68.113	Gambusia_affinis
WBGene00004373	rme-1	95	67.490	ENSGACG00000017605	ehd1a	99	66.543	Gasterosteus_aculeatus
WBGene00004373	rme-1	97	65.741	ENSGAGG00000001677	-	92	65.619	Gopherus_agassizii
WBGene00004373	rme-1	95	67.925	ENSHBUG00000012087	ehd1a	98	67.925	Haplochromis_burtoni
WBGene00004373	rme-1	97	67.407	ENSHGLG00000010254	EHD1	99	67.407	Heterocephalus_glaber_female
WBGene00004373	rme-1	97	67.407	ENSHGLG00100014206	EHD1	99	67.407	Heterocephalus_glaber_male
WBGene00004373	rme-1	95	67.486	ENSHCOG00000006825	ehd1a	98	67.486	Hippocampus_comes
WBGene00004373	rme-1	98	66.851	ENSIPUG00000017390	EHD1	99	67.407	Ictalurus_punctatus
WBGene00004373	rme-1	98	66.851	ENSIPUG00000002819	ehd1a	99	66.851	Ictalurus_punctatus
WBGene00004373	rme-1	97	67.222	ENSSTOG00000009829	EHD1	99	67.222	Ictidomys_tridecemlineatus
WBGene00004373	rme-1	97	67.222	ENSJJAG00000022299	Ehd1	99	67.222	Jaculus_jaculus
WBGene00004373	rme-1	95	68.113	ENSKMAG00000004764	ehd1a	98	68.113	Kryptolebias_marmoratus
WBGene00004373	rme-1	95	68.679	ENSLBEG00000004390	ehd1a	98	68.679	Labrus_bergylta
WBGene00004373	rme-1	98	66.789	ENSLACG00000018148	EHD1	100	66.789	Latimeria_chalumnae
WBGene00004373	rme-1	97	62.847	ENSLOCG00000000924	ehd1b	96	62.847	Lepisosteus_oculatus
WBGene00004373	rme-1	97	65.370	ENSLAFG00000011643	EHD1	99	65.370	Loxodonta_africana
WBGene00004373	rme-1	97	67.222	ENSMFAG00000032608	EHD1	99	67.222	Macaca_fascicularis
WBGene00004373	rme-1	97	67.222	ENSMMUG00000003972	EHD1	97	67.283	Macaca_mulatta
WBGene00004373	rme-1	97	67.222	ENSMNEG00000031673	EHD1	99	67.222	Macaca_nemestrina
WBGene00004373	rme-1	97	67.222	ENSMLEG00000031992	EHD1	99	67.222	Mandrillus_leucophaeus
WBGene00004373	rme-1	95	69.057	ENSMAMG00000021737	ehd1a	98	69.057	Mastacembelus_armatus
WBGene00004373	rme-1	95	67.925	ENSMZEG00005004305	ehd1a	98	67.925	Maylandia_zebra
WBGene00004373	rme-1	97	67.593	ENSMAUG00000013823	Ehd1	99	67.593	Mesocricetus_auratus
WBGene00004373	rme-1	97	67.407	ENSMICG00000001239	EHD1	99	67.699	Microcebus_murinus
WBGene00004373	rme-1	97	67.407	ENSMOCG00000015517	Ehd1	99	67.407	Microtus_ochrogaster
WBGene00004373	rme-1	95	68.431	ENSMMOG00000003005	ehd1a	98	68.431	Mola_mola
WBGene00004373	rme-1	95	69.057	ENSMALG00000012679	ehd1a	98	69.057	Monopterus_albus
WBGene00004373	rme-1	97	67.222	MGP_CAROLIEiJ_G0022603	Ehd1	99	67.222	Mus_caroli
WBGene00004373	rme-1	97	67.222	ENSMUSG00000024772	Ehd1	99	67.222	Mus_musculus
WBGene00004373	rme-1	97	67.037	MGP_PahariEiJ_G0014097	Ehd1	99	67.037	Mus_pahari
WBGene00004373	rme-1	97	67.222	MGP_SPRETEiJ_G0023514	Ehd1	99	67.222	Mus_spretus
WBGene00004373	rme-1	97	67.222	ENSMPUG00000012497	EHD1	99	67.222	Mustela_putorius_furo
WBGene00004373	rme-1	97	67.407	ENSNGAG00000020358	Ehd1	99	67.407	Nannospalax_galili
WBGene00004373	rme-1	95	68.302	ENSNBRG00000002933	ehd1a	98	68.302	Neolamprologus_brichardi
WBGene00004373	rme-1	97	67.222	ENSNLEG00000005375	EHD1	99	67.222	Nomascus_leucogenys
WBGene00004373	rme-1	97	66.852	ENSOPRG00000011350	EHD1	99	66.852	Ochotona_princeps
WBGene00004373	rme-1	97	67.407	ENSODEG00000014527	EHD1	99	67.407	Octodon_degus
WBGene00004373	rme-1	58	72.840	ENSOCUG00000029532	EHD1	96	72.923	Oryctolagus_cuniculus
WBGene00004373	rme-1	95	68.302	ENSORLG00000022561	ehd1a	98	68.302	Oryzias_latipes
WBGene00004373	rme-1	95	68.302	ENSORLG00020018451	ehd1a	98	68.302	Oryzias_latipes_hni
WBGene00004373	rme-1	95	68.302	ENSORLG00015017672	ehd1a	98	68.302	Oryzias_latipes_hsok
WBGene00004373	rme-1	95	67.547	ENSOMEG00000019329	ehd1a	98	67.547	Oryzias_melastigma
WBGene00004373	rme-1	97	67.407	ENSOGAG00000009351	EHD1	99	67.407	Otolemur_garnettii
WBGene00004373	rme-1	89	67.611	ENSOARG00000010447	EHD1	99	67.611	Ovis_aries
WBGene00004373	rme-1	97	67.222	ENSPPAG00000037178	EHD1	99	67.222	Pan_paniscus
WBGene00004373	rme-1	97	65.370	ENSPPRG00000006031	EHD1	97	65.434	Panthera_pardus
WBGene00004373	rme-1	97	67.222	ENSPTRG00000003851	EHD1	97	67.283	Pan_troglodytes
WBGene00004373	rme-1	97	67.222	ENSPANG00000023358	EHD1	97	67.283	Papio_anubis
WBGene00004373	rme-1	65	71.389	ENSPKIG00000020297	-	88	71.389	Paramormyrops_kingsleyae
WBGene00004373	rme-1	96	66.417	ENSPKIG00000023165	-	99	66.417	Paramormyrops_kingsleyae
WBGene00004373	rme-1	97	66.296	ENSPSIG00000005727	EHD1	99	66.296	Pelodiscus_sinensis
WBGene00004373	rme-1	97	67.784	ENSPMGG00000017810	ehd1a	97	68.431	Periophthalmus_magnuspinnatus
WBGene00004373	rme-1	97	67.407	ENSPEMG00000010917	Ehd1	99	67.407	Peromyscus_maniculatus_bairdii
WBGene00004373	rme-1	70	62.051	ENSPCIG00000017053	-	99	60.546	Phascolarctos_cinereus
WBGene00004373	rme-1	97	67.593	ENSPCIG00000014850	EHD1	99	67.593	Phascolarctos_cinereus
WBGene00004373	rme-1	95	68.242	ENSPFOG00000010613	ehd1a	99	66.912	Poecilia_formosa
WBGene00004373	rme-1	95	68.242	ENSPLAG00000023296	ehd1a	98	68.242	Poecilia_latipinna
WBGene00004373	rme-1	95	68.242	ENSPMEG00000003397	ehd1a	98	68.242	Poecilia_mexicana
WBGene00004373	rme-1	95	68.431	ENSPREG00000015893	ehd1a	98	68.431	Poecilia_reticulata
WBGene00004373	rme-1	97	67.222	ENSPPYG00000003093	EHD1	99	67.222	Pongo_abelii
WBGene00004373	rme-1	97	67.407	ENSPCOG00000010309	EHD1	99	67.407	Propithecus_coquereli
WBGene00004373	rme-1	97	67.407	ENSPVAG00000007890	EHD1	99	67.407	Pteropus_vampyrus
WBGene00004373	rme-1	95	67.925	ENSPNYG00000015448	ehd1a	98	67.925	Pundamilia_nyererei
WBGene00004373	rme-1	98	67.159	ENSPNAG00000007408	EHD1	100	67.159	Pygocentrus_nattereri
WBGene00004373	rme-1	98	66.667	ENSPNAG00000023091	ehd1a	99	66.667	Pygocentrus_nattereri
WBGene00004373	rme-1	97	67.222	ENSRNOG00000043503	Ehd1	99	67.222	Rattus_norvegicus
WBGene00004373	rme-1	97	67.222	ENSRBIG00000039111	EHD1	99	67.222	Rhinopithecus_bieti
WBGene00004373	rme-1	97	67.222	ENSRROG00000026366	EHD1	99	67.222	Rhinopithecus_roxellana
WBGene00004373	rme-1	97	67.037	ENSSBOG00000023399	EHD1	99	67.037	Saimiri_boliviensis_boliviensis
WBGene00004373	rme-1	71	61.224	ENSSHAG00000007430	-	93	60.794	Sarcophilus_harrisii
WBGene00004373	rme-1	98	66.851	ENSSFOG00015006481	-	99	66.851	Scleropages_formosus
WBGene00004373	rme-1	90	68.072	ENSSFOG00015019587	EHD1	100	68.072	Scleropages_formosus
WBGene00004373	rme-1	96	67.293	ENSSMAG00000018210	ehd1a	98	67.293	Scophthalmus_maximus
WBGene00004373	rme-1	95	68.302	ENSSDUG00000016436	ehd1a	98	68.302	Seriola_dumerili
WBGene00004373	rme-1	95	68.302	ENSSLDG00000015328	ehd1a	98	68.302	Seriola_lalandi_dorsalis
WBGene00004373	rme-1	96	68.045	ENSSPAG00000008682	ehd1a	98	68.045	Stegastes_partitus
WBGene00004373	rme-1	98	67.219	ENSSSCG00000013017	EHD1	100	67.219	Sus_scrofa
WBGene00004373	rme-1	95	68.491	ENSTRUG00000025890	ehd1a	98	68.491	Takifugu_rubripes
WBGene00004373	rme-1	97	67.347	ENSTNIG00000016792	ehd1a	99	67.347	Tetraodon_nigroviridis
WBGene00004373	rme-1	76	62.559	ENSTBEG00000007057	EHD1	99	62.559	Tupaia_belangeri
WBGene00004373	rme-1	97	67.407	ENSTTRG00000008887	EHD1	99	67.407	Tursiops_truncatus
WBGene00004373	rme-1	97	67.407	ENSUAMG00000012071	EHD1	99	67.407	Ursus_americanus
WBGene00004373	rme-1	97	65.993	ENSUMAG00000007890	EHD1	99	65.993	Ursus_maritimus
WBGene00004373	rme-1	97	67.407	ENSVVUG00000027552	EHD1	88	65.378	Vulpes_vulpes
WBGene00004373	rme-1	97	67.037	ENSXETG00000001638	ehd1	99	67.037	Xenopus_tropicalis
WBGene00004373	rme-1	97	67.593	ENSXCOG00000001781	ehd1a	99	67.593	Xiphophorus_couchianus
WBGene00004373	rme-1	95	68.302	ENSXMAG00000005301	ehd1a	98	68.302	Xiphophorus_maculatus