EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00004387 (Gene tree)
Gene ID: -
Gene Symbol: rnp-4
Alias: RBM8|Y14GN
Full Name: RNA-binding protein 8A
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1041 bases
Position: chrIII:4406286-4407326
Accession: Q21832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R07E5	RRM_1	PF00076.22	2.3e-18	1	1
R07E5	RRM_1	PF00076.22	2.3e-18	1	1
R07E5	RRM_3	PF08777.11	3.3e-05	1	1
R07E5	RRM_3	PF08777.11	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R07E5.14.1	-	681	-	R07E5.14.1	142 (aa)	-	Q21832
R07E5.14.2	-	575	NM_065490	R07E5.14.2	142 (aa)	NP_497891	Q21832

Gene Model

Click here to download WBGene00004387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00004387	rnp-4	54	30.263	WBGene00011155	R09B3.2	92	30.263
WBGene00004387	rnp-4	56	35.443	WBGene00011156	R09B3.3	93	35.443
WBGene00004387	rnp-4	56	30.380	WBGene00011059	R06C1.4	94	30.380

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004387	rnp-4	82	63.793	ENSG00000265241	RBM8A	90	68.421	Homo_sapiens
WBGene00004387	rnp-4	83	59.504	ENSAPOG00000009727	rbm8a	81	52.448	Acanthochromis_polyacanthus
WBGene00004387	rnp-4	80	63.248	ENSAMEG00000017623	RBM8A	75	59.259	Ailuropoda_melanoleuca
WBGene00004387	rnp-4	87	58.730	ENSACIG00000017678	rbm8a	81	57.252	Amphilophus_citrinellus
WBGene00004387	rnp-4	83	59.504	ENSAOCG00000023887	rbm8a	68	52.448	Amphiprion_ocellaris
WBGene00004387	rnp-4	83	59.504	ENSAPEG00000022847	rbm8a	68	52.448	Amphiprion_percula
WBGene00004387	rnp-4	83	59.504	ENSATEG00000005630	rbm8a	81	52.448	Anabas_testudineus
WBGene00004387	rnp-4	80	63.248	ENSANAG00000004525	RBM8A	83	55.102	Aotus_nancymaae
WBGene00004387	rnp-4	83	59.504	ENSACLG00000009627	rbm8a	81	52.448	Astatotilapia_calliptera
WBGene00004387	rnp-4	80	61.538	ENSAMXG00000040754	rbm8a	83	53.741	Astyanax_mexicanus
WBGene00004387	rnp-4	80	63.248	ENSCJAG00000046869	RBM8A	83	55.102	Callithrix_jacchus
WBGene00004387	rnp-4	80	63.248	ENSCAFG00000023172	RBM8A	83	55.102	Canis_familiaris
WBGene00004387	rnp-4	80	63.248	ENSCAFG00020019945	RBM8A	83	55.102	Canis_lupus_dingo
WBGene00004387	rnp-4	80	63.248	ENSCHIG00000012114	RBM8A	83	55.102	Capra_hircus
WBGene00004387	rnp-4	80	63.248	ENSTSYG00000028809	RBM8A	83	55.102	Carlito_syrichta
WBGene00004387	rnp-4	79	64.286	ENSCAPG00000014086	RBM8A	89	64.286	Cavia_aperea
WBGene00004387	rnp-4	87	60.317	ENSCPOG00000022453	RBM8A	83	55.944	Cavia_porcellus
WBGene00004387	rnp-4	80	62.393	ENSCCAG00000022460	-	83	54.422	Cebus_capucinus
WBGene00004387	rnp-4	80	63.248	ENSCCAG00000028589	-	83	55.102	Cebus_capucinus
WBGene00004387	rnp-4	80	63.248	ENSCATG00000021691	RBM8A	83	55.102	Cercocebus_atys
WBGene00004387	rnp-4	80	63.248	ENSCLAG00000000547	RBM8A	83	55.102	Chinchilla_lanigera
WBGene00004387	rnp-4	80	63.248	ENSCSAG00000001779	RBM8A	83	55.102	Chlorocebus_sabaeus
WBGene00004387	rnp-4	80	63.248	ENSCPBG00000007941	RBM8A	67	55.102	Chrysemys_picta_bellii
WBGene00004387	rnp-4	85	57.377	ENSCING00000004877	-	80	52.985	Ciona_intestinalis
WBGene00004387	rnp-4	94	55.474	ENSCSAVG00000005685	-	86	53.103	Ciona_savignyi
WBGene00004387	rnp-4	80	63.248	ENSCANG00000042182	RBM8A	83	55.102	Colobus_angolensis_palliatus
WBGene00004387	rnp-4	80	63.248	ENSCGRG00001002681	-	83	55.102	Cricetulus_griseus_chok1gshd
WBGene00004387	rnp-4	84	55.833	ENSCGRG00001003032	-	78	51.825	Cricetulus_griseus_chok1gshd
WBGene00004387	rnp-4	80	63.248	ENSCGRG00000006832	-	83	55.102	Cricetulus_griseus_crigri
WBGene00004387	rnp-4	83	58.678	ENSCSEG00000011865	rbm8a	81	51.748	Cynoglossus_semilaevis
WBGene00004387	rnp-4	85	60.331	ENSCVAG00000020734	rbm8a	75	57.252	Cyprinodon_variegatus
WBGene00004387	rnp-4	83	60.331	ENSDARG00000016516	rbm8a	81	53.846	Danio_rerio
WBGene00004387	rnp-4	62	52.747	ENSDNOG00000025265	-	98	52.747	Dasypus_novemcinctus
WBGene00004387	rnp-4	87	60.317	ENSDORG00000027340	-	83	55.102	Dipodomys_ordii
WBGene00004387	rnp-4	87	57.937	FBgn0033378	tsu	76	57.937	Drosophila_melanogaster
WBGene00004387	rnp-4	61	70.930	ENSETEG00000017932	-	52	69.231	Echinops_telfairi
WBGene00004387	rnp-4	74	58.716	ENSETEG00000008411	-	70	52.381	Echinops_telfairi
WBGene00004387	rnp-4	85	58.871	ENSEBUG00000010386	rbm8a	74	56.489	Eptatretus_burgeri
WBGene00004387	rnp-4	80	63.248	ENSEASG00005007455	RBM8A	83	55.102	Equus_asinus_asinus
WBGene00004387	rnp-4	80	63.248	ENSECAG00000022024	RBM8A	83	55.102	Equus_caballus
WBGene00004387	rnp-4	87	57.937	ENSELUG00000012464	rbm8a	74	57.252	Esox_lucius
WBGene00004387	rnp-4	82	63.793	ENSFCAG00000033936	RBM8A	83	55.479	Felis_catus
WBGene00004387	rnp-4	80	63.248	ENSFDAG00000020821	RBM8A	83	55.102	Fukomys_damarensis
WBGene00004387	rnp-4	85	61.157	ENSFHEG00000013538	rbm8a	75	58.015	Fundulus_heteroclitus
WBGene00004387	rnp-4	85	58.065	ENSGMOG00000007353	rbm8a	90	51.748	Gadus_morhua
WBGene00004387	rnp-4	76	65.741	ENSGALG00000036283	RBM8A	73	62.810	Gallus_gallus
WBGene00004387	rnp-4	85	60.331	ENSGAFG00000021698	rbm8a	74	57.252	Gambusia_affinis
WBGene00004387	rnp-4	83	58.678	ENSGACG00000013157	rbm8a	93	51.351	Gasterosteus_aculeatus
WBGene00004387	rnp-4	80	63.248	ENSGAGG00000023769	RBM8A	83	55.102	Gopherus_agassizii
WBGene00004387	rnp-4	80	63.248	ENSGGOG00000037248	RBM8A	83	55.102	Gorilla_gorilla
WBGene00004387	rnp-4	87	57.937	ENSHBUG00000008827	rbm8a	81	56.489	Haplochromis_burtoni
WBGene00004387	rnp-4	80	63.248	ENSHGLG00000007303	RBM8A	83	55.102	Heterocephalus_glaber_female
WBGene00004387	rnp-4	80	63.248	ENSHGLG00100012468	RBM8A	83	55.102	Heterocephalus_glaber_male
WBGene00004387	rnp-4	83	58.678	ENSHCOG00000010122	rbm8a	75	56.489	Hippocampus_comes
WBGene00004387	rnp-4	83	58.678	ENSIPUG00000006525	rbm8a	73	52.448	Ictalurus_punctatus
WBGene00004387	rnp-4	80	63.248	ENSSTOG00000013917	RBM8A	83	55.102	Ictidomys_tridecemlineatus
WBGene00004387	rnp-4	80	63.248	ENSJJAG00000009488	-	83	55.102	Jaculus_jaculus
WBGene00004387	rnp-4	85	59.504	ENSKMAG00000014454	rbm8a	74	56.489	Kryptolebias_marmoratus
WBGene00004387	rnp-4	85	59.677	ENSLBEG00000015720	rbm8a	83	52.703	Labrus_bergylta
WBGene00004387	rnp-4	83	60.331	ENSLACG00000014365	RBM8A	83	54.054	Latimeria_chalumnae
WBGene00004387	rnp-4	83	59.504	ENSLOCG00000009082	rbm8a	81	53.147	Lepisosteus_oculatus
WBGene00004387	rnp-4	83	61.983	ENSLAFG00000021886	-	81	55.245	Loxodonta_africana
WBGene00004387	rnp-4	91	42.754	ENSLAFG00000011031	-	78	42.754	Loxodonta_africana
WBGene00004387	rnp-4	82	63.793	ENSMFAG00000045376	RBM8A	83	55.479	Macaca_fascicularis
WBGene00004387	rnp-4	87	60.317	ENSMMUG00000016051	RBM8A	77	58.779	Macaca_mulatta
WBGene00004387	rnp-4	80	63.248	ENSMNEG00000040422	RBM8A	83	55.102	Macaca_nemestrina
WBGene00004387	rnp-4	80	63.248	ENSMLEG00000039155	RBM8A	83	55.102	Mandrillus_leucophaeus
WBGene00004387	rnp-4	83	57.025	ENSMAMG00000010565	rbm8a	81	50.350	Mastacembelus_armatus
WBGene00004387	rnp-4	83	59.504	ENSMZEG00005016453	rbm8a	81	52.448	Maylandia_zebra
WBGene00004387	rnp-4	87	60.317	ENSMAUG00000016783	-	83	55.102	Mesocricetus_auratus
WBGene00004387	rnp-4	68	60.417	ENSMICG00000037163	-	78	49.219	Microcebus_murinus
WBGene00004387	rnp-4	80	63.248	ENSMICG00000031698	-	83	55.102	Microcebus_murinus
WBGene00004387	rnp-4	80	63.248	ENSMOCG00000017782	-	83	55.102	Microtus_ochrogaster
WBGene00004387	rnp-4	90	54.962	ENSMMOG00000017179	rbm8a	82	54.962	Mola_mola
WBGene00004387	rnp-4	80	62.393	ENSMODG00000018752	RBM8A	83	54.422	Monodelphis_domestica
WBGene00004387	rnp-4	83	58.678	ENSMALG00000010145	rbm8a	83	51.351	Monopterus_albus
WBGene00004387	rnp-4	80	62.393	MGP_CAROLIEiJ_G0014951	Rbm8a2	83	54.422	Mus_caroli
WBGene00004387	rnp-4	87	60.317	MGP_CAROLIEiJ_G0025383	Rbm8a	83	55.479	Mus_caroli
WBGene00004387	rnp-4	87	60.317	ENSMUSG00000038374	Rbm8a	89	63.717	Mus_musculus
WBGene00004387	rnp-4	80	63.248	ENSMUSG00000078184	Rbm8a2	83	55.102	Mus_musculus
WBGene00004387	rnp-4	87	60.317	MGP_PahariEiJ_G0026828	-	89	63.717	Mus_pahari
WBGene00004387	rnp-4	87	60.317	MGP_SPRETEiJ_G0026330	Rbm8a	89	63.717	Mus_spretus
WBGene00004387	rnp-4	80	63.248	ENSMPUG00000000775	RBM8A	83	55.102	Mustela_putorius_furo
WBGene00004387	rnp-4	80	63.248	ENSMLUG00000017436	-	83	55.102	Myotis_lucifugus
WBGene00004387	rnp-4	80	59.649	ENSMLUG00000022711	-	80	53.383	Myotis_lucifugus
WBGene00004387	rnp-4	83	61.983	ENSNGAG00000016038	-	81	55.245	Nannospalax_galili
WBGene00004387	rnp-4	83	59.504	ENSNBRG00000004541	rbm8a	81	52.448	Neolamprologus_brichardi
WBGene00004387	rnp-4	80	63.248	ENSNLEG00000029632	RBM8A	83	55.102	Nomascus_leucogenys
WBGene00004387	rnp-4	76	66.667	ENSMEUG00000016058	RBM8A	91	63.636	Notamacropus_eugenii
WBGene00004387	rnp-4	54	63.750	ENSOPRG00000013316	RBM8A	73	62.353	Ochotona_princeps
WBGene00004387	rnp-4	80	56.140	ENSODEG00000008563	-	75	53.030	Octodon_degus
WBGene00004387	rnp-4	80	63.248	ENSODEG00000000114	-	83	55.102	Octodon_degus
WBGene00004387	rnp-4	57	64.198	ENSODEG00000002094	-	82	45.578	Octodon_degus
WBGene00004387	rnp-4	83	59.504	ENSONIG00000008608	rbm8a	81	52.448	Oreochromis_niloticus
WBGene00004387	rnp-4	80	63.248	ENSOCUG00000025693	RBM8A	75	59.259	Oryctolagus_cuniculus
WBGene00004387	rnp-4	83	60.331	ENSORLG00000016263	rbm8a	83	52.703	Oryzias_latipes
WBGene00004387	rnp-4	87	58.730	ENSORLG00020012904	rbm8a	76	52.703	Oryzias_latipes_hni
WBGene00004387	rnp-4	83	60.331	ENSORLG00015018824	rbm8a	83	52.703	Oryzias_latipes_hsok
WBGene00004387	rnp-4	83	60.331	ENSOMEG00000021533	rbm8a	65	52.703	Oryzias_melastigma
WBGene00004387	rnp-4	80	63.248	ENSOGAG00000000202	RBM8A	75	59.259	Otolemur_garnettii
WBGene00004387	rnp-4	80	63.248	ENSOARG00000020634	RBM8A	83	55.102	Ovis_aries
WBGene00004387	rnp-4	80	63.248	ENSPPAG00000029116	RBM8A	83	55.102	Pan_paniscus
WBGene00004387	rnp-4	82	63.793	ENSPPRG00000008243	RBM8A	83	55.479	Panthera_pardus
WBGene00004387	rnp-4	80	63.248	ENSPTIG00000009472	RBM8A	83	55.102	Panthera_tigris_altaica
WBGene00004387	rnp-4	80	63.248	ENSPTRG00000001201	RBM8A	83	55.102	Pan_troglodytes
WBGene00004387	rnp-4	80	63.248	ENSPANG00000020584	RBM8A	83	55.102	Papio_anubis
WBGene00004387	rnp-4	84	61.667	ENSPKIG00000009551	rbm8a	60	53.147	Paramormyrops_kingsleyae
WBGene00004387	rnp-4	87	59.524	ENSPKIG00000020558	rbm8a	76	58.333	Paramormyrops_kingsleyae
WBGene00004387	rnp-4	83	59.504	ENSPMGG00000010122	rbm8a	81	52.448	Periophthalmus_magnuspinnatus
WBGene00004387	rnp-4	80	63.248	ENSPEMG00000018117	-	83	55.102	Peromyscus_maniculatus_bairdii
WBGene00004387	rnp-4	80	62.393	ENSPCIG00000011931	RBM8A	83	54.422	Phascolarctos_cinereus
WBGene00004387	rnp-4	85	61.157	ENSPFOG00000010695	rbm8a	74	58.015	Poecilia_formosa
WBGene00004387	rnp-4	85	61.157	ENSPLAG00000009183	rbm8a	74	58.015	Poecilia_latipinna
WBGene00004387	rnp-4	85	61.157	ENSPMEG00000013950	rbm8a	74	58.015	Poecilia_mexicana
WBGene00004387	rnp-4	88	58.730	ENSPREG00000017572	rbm8a	81	57.252	Poecilia_reticulata
WBGene00004387	rnp-4	80	63.248	ENSPPYG00000000929	RBM8A	83	55.102	Pongo_abelii
WBGene00004387	rnp-4	83	62.810	ENSPCAG00000002146	-	81	55.944	Procavia_capensis
WBGene00004387	rnp-4	80	63.248	ENSPCOG00000022886	RBM8A	83	55.102	Propithecus_coquereli
WBGene00004387	rnp-4	80	63.248	ENSPVAG00000014471	RBM8A	83	55.102	Pteropus_vampyrus
WBGene00004387	rnp-4	83	59.504	ENSPNYG00000013564	rbm8a	81	52.448	Pundamilia_nyererei
WBGene00004387	rnp-4	83	61.157	ENSPNAG00000028502	rbm8a	81	54.545	Pygocentrus_nattereri
WBGene00004387	rnp-4	80	63.248	ENSRNOG00000021215	Rbm8a	83	55.102	Rattus_norvegicus
WBGene00004387	rnp-4	82	63.793	ENSRBIG00000039233	RBM8A	83	55.479	Rhinopithecus_bieti
WBGene00004387	rnp-4	80	63.248	ENSRROG00000040324	-	83	55.102	Rhinopithecus_roxellana
WBGene00004387	rnp-4	76	64.815	ENSRROG00000033023	-	73	60.317	Rhinopithecus_roxellana
WBGene00004387	rnp-4	80	63.248	ENSSBOG00000031316	RBM8A	83	55.102	Saimiri_boliviensis_boliviensis
WBGene00004387	rnp-4	80	62.393	ENSSHAG00000018629	RBM8A	83	54.422	Sarcophilus_harrisii
WBGene00004387	rnp-4	83	61.157	ENSSFOG00015024171	rbm8a	74	59.542	Scleropages_formosus
WBGene00004387	rnp-4	87	59.524	ENSSFOG00015009007	rbm8a	81	54.545	Scleropages_formosus
WBGene00004387	rnp-4	83	58.678	ENSSMAG00000012998	rbm8a	83	51.351	Scophthalmus_maximus
WBGene00004387	rnp-4	83	59.504	ENSSDUG00000005911	rbm8a	81	52.448	Seriola_dumerili
WBGene00004387	rnp-4	83	59.504	ENSSLDG00000011664	rbm8a	81	52.448	Seriola_lalandi_dorsalis
WBGene00004387	rnp-4	80	63.248	ENSSARG00000013289	RBM8A	83	55.102	Sorex_araneus
WBGene00004387	rnp-4	80	62.393	ENSSPUG00000001576	RBM8A	83	54.422	Sphenodon_punctatus
WBGene00004387	rnp-4	83	59.504	ENSSPAG00000012181	rbm8a	81	52.448	Stegastes_partitus
WBGene00004387	rnp-4	80	63.248	ENSSSCG00000028509	RBM8A	80	58.824	Sus_scrofa
WBGene00004387	rnp-4	80	62.393	ENSTGUG00000004447	RBM8A	83	54.422	Taeniopygia_guttata
WBGene00004387	rnp-4	83	57.851	ENSTRUG00000013173	rbm8a	80	54.412	Takifugu_rubripes
WBGene00004387	rnp-4	85	57.851	ENSTNIG00000006869	rbm8a	81	51.064	Tetraodon_nigroviridis
WBGene00004387	rnp-4	54	63.750	ENSTBEG00000014947	RBM8A	73	62.353	Tupaia_belangeri
WBGene00004387	rnp-4	80	63.248	ENSTTRG00000009081	RBM8A	89	58.824	Tursiops_truncatus
WBGene00004387	rnp-4	80	63.248	ENSUAMG00000021929	RBM8A	83	55.102	Ursus_americanus
WBGene00004387	rnp-4	80	63.248	ENSUMAG00000010298	RBM8A	83	55.102	Ursus_maritimus
WBGene00004387	rnp-4	80	63.248	ENSVVUG00000007486	RBM8A	83	55.102	Vulpes_vulpes
WBGene00004387	rnp-4	85	60.331	ENSXCOG00000004369	rbm8a	74	57.252	Xiphophorus_couchianus
WBGene00004387	rnp-4	88	58.730	ENSXMAG00000013463	rbm8a	82	57.252	Xiphophorus_maculatus