EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004390 (Gene tree)
Gene ID: -
Gene Symbol: rnp-7
Alias: -
Full Name: RNP (RRM RNA binding domain) containing
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 2246 bases
Position: chrIII:7158912-7161157
Accession: Q09584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K04G7	RRM_1	PF00076.22	2.9e-17	1	1
K04G7	RRM_1	PF00076.22	2.9e-17	1	1
K04G7	U1snRNP70_N	PF12220.8	5.3e-22	1	1
K04G7	U1snRNP70_N	PF12220.8	5.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K04G7.10.2	-	1245	NM_066164	K04G7.10.2	332 (aa)	NP_498565	Q09584
K04G7.10.1	-	1114	NM_066164	K04G7.10.1	332 (aa)	NP_498565	Q09584

Gene Model

Click here to download WBGene00004390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004390	rnp-7	56	53.723	ENSG00000104852	SNRNP70	99	52.688	Homo_sapiens
WBGene00004390	rnp-7	56	51.064	ENSACIG00000017909	snrnp70	54	47.876	Amphilophus_citrinellus
WBGene00004390	rnp-7	57	51.579	ENSAOCG00000011672	snrnp70	60	44.366	Amphiprion_ocellaris
WBGene00004390	rnp-7	57	51.579	ENSAPEG00000006219	snrnp70	52	48.016	Amphiprion_percula
WBGene00004390	rnp-7	57	51.053	ENSATEG00000008748	snrnp70	54	48.178	Anabas_testudineus
WBGene00004390	rnp-7	56	53.191	ENSACAG00000013276	SNRNP70	54	50.417	Anolis_carolinensis
WBGene00004390	rnp-7	56	53.723	ENSANAG00000036787	SNRNP70	99	50.303	Aotus_nancymaae
WBGene00004390	rnp-7	56	51.064	ENSACLG00000011144	snrnp70	54	47.266	Astatotilapia_calliptera
WBGene00004390	rnp-7	56	53.723	ENSCJAG00000000193	SNRNP70	99	50.303	Callithrix_jacchus
WBGene00004390	rnp-7	56	53.723	ENSCAFG00000003711	SNRNP70	99	50.303	Canis_familiaris
WBGene00004390	rnp-7	56	51.579	ENSCAFG00020025470	SNRNP70	99	47.904	Canis_lupus_dingo
WBGene00004390	rnp-7	56	53.723	ENSCPOG00000019589	SNRNP70	54	50.833	Cavia_porcellus
WBGene00004390	rnp-7	58	54.639	ENSCATG00000016149	SNRNP70	55	50.833	Cercocebus_atys
WBGene00004390	rnp-7	56	53.723	ENSCLAG00000007991	SNRNP70	55	50.833	Chinchilla_lanigera
WBGene00004390	rnp-7	56	53.723	ENSCSAG00000002759	SNRNP70	55	50.417	Chlorocebus_sabaeus
WBGene00004390	rnp-7	56	53.723	ENSCPBG00000014841	SNRNP70	54	51.250	Chrysemys_picta_bellii
WBGene00004390	rnp-7	67	52.889	ENSCING00000006015	-	54	51.210	Ciona_intestinalis
WBGene00004390	rnp-7	60	57.711	ENSCSAVG00000010109	-	53	57.711	Ciona_savignyi
WBGene00004390	rnp-7	56	53.723	ENSCANG00000036607	SNRNP70	97	50.833	Colobus_angolensis_palliatus
WBGene00004390	rnp-7	57	51.053	ENSCSEG00000011978	snrnp70	89	52.475	Cynoglossus_semilaevis
WBGene00004390	rnp-7	56	51.596	ENSDARG00000077126	snrnp70	99	49.383	Danio_rerio
WBGene00004390	rnp-7	56	53.723	ENSDORG00000010228	Snrnp70	54	50.833	Dipodomys_ordii
WBGene00004390	rnp-7	57	57.368	FBgn0016978	snRNP-U1-70K	52	52.439	Drosophila_melanogaster
WBGene00004390	rnp-7	56	53.723	ENSEASG00005004917	SNRNP70	55	50.833	Equus_asinus_asinus
WBGene00004390	rnp-7	56	53.723	ENSFCAG00000042603	SNRNP70	57	50.833	Felis_catus
WBGene00004390	rnp-7	57	47.938	ENSGMOG00000011492	snrnp70	89	51.980	Gadus_morhua
WBGene00004390	rnp-7	58	52.577	ENSGAFG00000003395	snrnp70	55	47.082	Gambusia_affinis
WBGene00004390	rnp-7	57	48.454	ENSGACG00000000448	snrnp70	63	52.475	Gasterosteus_aculeatus
WBGene00004390	rnp-7	56	53.723	ENSGGOG00000008245	SNRNP70	99	50.303	Gorilla_gorilla
WBGene00004390	rnp-7	56	51.075	ENSHBUG00000018856	snrnp70	53	48.996	Haplochromis_burtoni
WBGene00004390	rnp-7	56	53.723	ENSJJAG00000002614	Snrnp70	54	50.833	Jaculus_jaculus
WBGene00004390	rnp-7	56	51.064	ENSKMAG00000005608	snrnp70	56	46.332	Kryptolebias_marmoratus
WBGene00004390	rnp-7	56	48.958	ENSLACG00000015684	SNRNP70	52	47.131	Latimeria_chalumnae
WBGene00004390	rnp-7	56	53.723	ENSLAFG00000028536	SNRNP70	87	54.950	Loxodonta_africana
WBGene00004390	rnp-7	58	54.639	ENSMFAG00000039824	SNRNP70	55	50.833	Macaca_fascicularis
WBGene00004390	rnp-7	56	53.723	ENSMMUG00000004928	SNRNP70	99	50.303	Macaca_mulatta
WBGene00004390	rnp-7	58	54.639	ENSMNEG00000038057	SNRNP70	56	50.833	Macaca_nemestrina
WBGene00004390	rnp-7	58	54.639	ENSMLEG00000030967	SNRNP70	55	50.833	Mandrillus_leucophaeus
WBGene00004390	rnp-7	57	51.053	ENSMAMG00000004556	snrnp70	53	48.996	Mastacembelus_armatus
WBGene00004390	rnp-7	56	51.064	ENSMZEG00005022849	snrnp70	53	48.996	Maylandia_zebra
WBGene00004390	rnp-7	56	53.723	ENSMAUG00000020970	Snrnp70	54	50.833	Mesocricetus_auratus
WBGene00004390	rnp-7	56	53.723	ENSMICG00000038437	SNRNP70	99	50.303	Microcebus_murinus
WBGene00004390	rnp-7	56	53.723	MGP_CAROLIEiJ_G0029714	Snrnp70	96	51.235	Mus_caroli
WBGene00004390	rnp-7	56	53.723	ENSMPUG00000003258	SNRNP70	55	50.833	Mustela_putorius_furo
WBGene00004390	rnp-7	56	53.723	ENSMLUG00000011766	SNRNP70	55	50.833	Myotis_lucifugus
WBGene00004390	rnp-7	56	51.596	ENSNBRG00000003126	snrnp70	86	52.970	Neolamprologus_brichardi
WBGene00004390	rnp-7	55	52.747	ENSNLEG00000004899	SNRNP70	100	48.400	Nomascus_leucogenys
WBGene00004390	rnp-7	56	51.596	ENSONIG00000007822	snrnp70	59	48.047	Oreochromis_niloticus
WBGene00004390	rnp-7	56	53.191	ENSOANG00000005213	SNRNP70	88	54.455	Ornithorhynchus_anatinus
WBGene00004390	rnp-7	58	53.093	ENSORLG00000017158	snrnp70	57	46.642	Oryzias_latipes
WBGene00004390	rnp-7	57	52.105	ENSORLG00015010817	snrnp70	54	48.263	Oryzias_latipes_hsok
WBGene00004390	rnp-7	57	52.105	ENSOMEG00000013002	snrnp70	54	49.799	Oryzias_melastigma
WBGene00004390	rnp-7	56	53.368	ENSOGAG00000029310	SNRNP70	55	50.622	Otolemur_garnettii
WBGene00004390	rnp-7	56	53.723	ENSOARG00000012608	SNRNP70	54	54.950	Ovis_aries
WBGene00004390	rnp-7	56	53.723	ENSPPAG00000035067	SNRNP70	99	50.303	Pan_paniscus
WBGene00004390	rnp-7	56	53.723	ENSPPRG00000005579	SNRNP70	55	50.833	Panthera_pardus
WBGene00004390	rnp-7	56	53.723	ENSPTRG00000011277	SNRNP70	99	50.303	Pan_troglodytes
WBGene00004390	rnp-7	58	54.639	ENSPANG00000004068	SNRNP70	55	50.833	Papio_anubis
WBGene00004390	rnp-7	51	50.588	ENSPSIG00000015251	SNRNP70	79	47.525	Pelodiscus_sinensis
WBGene00004390	rnp-7	51	46.471	ENSPMGG00000010153	snrnp70	81	46.471	Periophthalmus_magnuspinnatus
WBGene00004390	rnp-7	58	54.639	ENSPMAG00000008502	snrnp70	100	54.639	Petromyzon_marinus
WBGene00004390	rnp-7	56	53.723	ENSPCIG00000007296	SNRNP70	58	49.606	Phascolarctos_cinereus
WBGene00004390	rnp-7	56	51.596	ENSPFOG00000016671	snrnp70	54	47.431	Poecilia_formosa
WBGene00004390	rnp-7	56	51.596	ENSPLAG00000005912	snrnp70	54	47.431	Poecilia_latipinna
WBGene00004390	rnp-7	66	49.772	ENSPMEG00000008496	snrnp70	54	47.431	Poecilia_mexicana
WBGene00004390	rnp-7	58	52.577	ENSPREG00000005486	snrnp70	54	47.431	Poecilia_reticulata
WBGene00004390	rnp-7	56	53.191	ENSPPYG00000010234	SNRNP70	55	50.417	Pongo_abelii
WBGene00004390	rnp-7	56	51.064	ENSPCOG00000023103	SNRNP70	94	46.591	Propithecus_coquereli
WBGene00004390	rnp-7	56	50.000	ENSPVAG00000009578	SNRNP70	55	47.917	Pteropus_vampyrus
WBGene00004390	rnp-7	56	51.064	ENSPNYG00000003258	snrnp70	53	48.996	Pundamilia_nyererei
WBGene00004390	rnp-7	56	53.723	ENSRBIG00000042387	SNRNP70	89	50.833	Rhinopithecus_bieti
WBGene00004390	rnp-7	56	53.723	ENSRROG00000033636	SNRNP70	89	50.833	Rhinopithecus_roxellana
WBGene00004390	rnp-7	54	31.746	YIL061C	SNP1	65	33.498	Saccharomyces_cerevisiae
WBGene00004390	rnp-7	56	53.723	ENSSBOG00000020026	SNRNP70	99	50.303	Saimiri_boliviensis_boliviensis
WBGene00004390	rnp-7	56	53.723	ENSSHAG00000002194	SNRNP70	58	49.606	Sarcophilus_harrisii
WBGene00004390	rnp-7	57	51.579	ENSSDUG00000017591	snrnp70	51	49.398	Seriola_dumerili
WBGene00004390	rnp-7	57	51.579	ENSSLDG00000009459	snrnp70	59	45.455	Seriola_lalandi_dorsalis
WBGene00004390	rnp-7	70	46.215	ENSSPUG00000016621	SNRNP70	64	46.125	Sphenodon_punctatus
WBGene00004390	rnp-7	57	51.579	ENSSPAG00000009563	snrnp70	59	44.637	Stegastes_partitus
WBGene00004390	rnp-7	56	50.532	ENSTRUG00000009202	snrnp70	53	48.031	Takifugu_rubripes
WBGene00004390	rnp-7	56	53.723	ENSTTRG00000017099	SNRNP70	54	50.833	Tursiops_truncatus
WBGene00004390	rnp-7	56	53.723	ENSUAMG00000016147	SNRNP70	55	50.833	Ursus_americanus
WBGene00004390	rnp-7	56	53.723	ENSUMAG00000001467	SNRNP70	99	50.303	Ursus_maritimus
WBGene00004390	rnp-7	58	45.078	ENSVPAG00000005959	-	91	47.525	Vicugna_pacos
WBGene00004390	rnp-7	56	53.723	ENSVVUG00000022976	SNRNP70	99	50.303	Vulpes_vulpes
WBGene00004390	rnp-7	56	53.723	ENSXETG00000022919	snrnp70	51	54.950	Xenopus_tropicalis
WBGene00004390	rnp-7	58	51.515	ENSXMAG00000012789	snrnp70	54	47.431	Xiphophorus_maculatus