EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
WBGene00004439 (Gene tree)
Gene ID
-
Gene Symbol
rpl-25.2
Alias
-
Full Name
60S ribosomal protein L23a 2
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
623 bases
Position
chrI:8329062-8329684
Accession
Q20647
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
F52B5Ribosomal_L23PF00276.207.4e-1611
F52B5Ribosomal_L23PF00276.207.4e-1611
F52B5Ribosomal_L23PF00276.207.4e-1611
F52B5Ribosomal_L23PF00276.207.4e-1611
F52B5Ribosomal_L23PF00276.207.4e-1611
F52B5Ribosomal_L23eNPF03939.131e-1811
F52B5Ribosomal_L23eNPF03939.131e-1811
F52B5Ribosomal_L23eNPF03939.131e-1811
F52B5Ribosomal_L23eNPF03939.131e-1811
F52B5Ribosomal_L23eNPF03939.131e-1811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
F52B5.6.5-495NM_059862F52B5.6.5146 (aa)NP_492263Q20647
F52B5.6.4-492NM_059862F52B5.6.4146 (aa)NP_492263Q20647
F52B5.6.3-491NM_059862F52B5.6.3146 (aa)NP_492263Q20647
F52B5.6.2-490NM_059862F52B5.6.2146 (aa)NP_492263Q20647
F52B5.6.1-513NM_059862F52B5.6.1146 (aa)NP_492263Q20647
Gene Model
Click here to download WBGene00004439's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004439's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
WBGene00004439rpl-25.210070.068WBGene00004438rpl-25.110070.068

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us