EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004443 (Gene tree)
Gene ID: -
Gene Symbol: rpl-29
Alias: -
Full Name: 60S ribosomal protein L29
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 396 bases
Position: chrIV:13882225-13882620
Accession: O45226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
B0513	Ribosomal_L29e	PF01779.17	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
B0513.3b	-	217	-	B0513.3b	31 (aa)	NP_001255764	D3YT71
B0513.3a	-	240	NM_001268834	B0513.3a	62 (aa)	NP_001255763	O45226

Gene Model

Click here to download WBGene00004443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004443	rpl-29	74	63.043	ENSG00000162244	RPL29	100	59.459	Homo_sapiens
WBGene00004443	rpl-29	87	62.963	ENSAPOG00000002586	rpl29	84	62.963	Acanthochromis_polyacanthus
WBGene00004443	rpl-29	87	61.111	ENSACIG00000018340	rpl29	84	61.111	Amphilophus_citrinellus
WBGene00004443	rpl-29	87	62.963	ENSAOCG00000016652	rpl29	84	62.963	Amphiprion_ocellaris
WBGene00004443	rpl-29	87	62.963	ENSAPEG00000005754	rpl29	84	62.963	Amphiprion_percula
WBGene00004443	rpl-29	74	63.043	ENSACAG00000006888	RPL29	86	58.929	Anolis_carolinensis
WBGene00004443	rpl-29	74	63.043	ENSANAG00000024147	-	62	62.162	Aotus_nancymaae
WBGene00004443	rpl-29	87	59.259	ENSACLG00000017820	rpl29	84	59.259	Astatotilapia_calliptera
WBGene00004443	rpl-29	87	61.111	ENSAMXG00000038794	rpl29	84	61.111	Astyanax_mexicanus
WBGene00004443	rpl-29	74	63.043	ENSCJAG00000042339	-	62	62.162	Callithrix_jacchus
WBGene00004443	rpl-29	74	63.043	ENSCCAG00000027980	-	62	62.162	Cebus_capucinus
WBGene00004443	rpl-29	74	57.447	ENSCSAG00000017871	-	50	54.386	Chlorocebus_sabaeus
WBGene00004443	rpl-29	63	58.974	ENSCPBG00000016679	-	51	58.974	Chrysemys_picta_bellii
WBGene00004443	rpl-29	84	63.462	ENSCING00000018496	-	90	63.462	Ciona_intestinalis
WBGene00004443	rpl-29	84	69.231	ENSCSAVG00000005231	-	88	69.231	Ciona_savignyi
WBGene00004443	rpl-29	74	63.043	ENSCGRG00001016452	-	82	58.929	Cricetulus_griseus_chok1gshd
WBGene00004443	rpl-29	81	64.000	ENSCSEG00000010267	rpl29	94	54.839	Cynoglossus_semilaevis
WBGene00004443	rpl-29	81	62.000	ENSCVAG00000023098	rpl29	97	53.226	Cyprinodon_variegatus
WBGene00004443	rpl-29	84	61.538	ENSDARG00000077717	rpl29	81	61.538	Danio_rerio
WBGene00004443	rpl-29	81	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
WBGene00004443	rpl-29	69	55.814	ENSEASG00005005507	-	66	55.814	Equus_asinus_asinus
WBGene00004443	rpl-29	84	67.308	ENSELUG00000015592	RL29	74	67.308	Esox_lucius
WBGene00004443	rpl-29	98	47.541	ENSFCAG00000043006	-	75	47.541	Felis_catus
WBGene00004443	rpl-29	74	67.391	ENSFALG00000008925	RPL29	82	62.500	Ficedula_albicollis
WBGene00004443	rpl-29	87	59.259	ENSFHEG00000015425	rpl29	84	59.259	Fundulus_heteroclitus
WBGene00004443	rpl-29	87	62.963	ENSGMOG00000003626	rpl29	71	62.963	Gadus_morhua
WBGene00004443	rpl-29	74	65.217	ENSGALG00000026978	RPL29	79	60.714	Gallus_gallus
WBGene00004443	rpl-29	87	59.259	ENSGAFG00000012868	rpl29	84	59.259	Gambusia_affinis
WBGene00004443	rpl-29	87	62.963	ENSGACG00000007041	rpl29	70	62.963	Gasterosteus_aculeatus
WBGene00004443	rpl-29	69	55.814	ENSGAGG00000024203	-	80	55.814	Gopherus_agassizii
WBGene00004443	rpl-29	74	63.043	ENSGGOG00000024691	RPL29	62	64.865	Gorilla_gorilla
WBGene00004443	rpl-29	87	59.259	ENSHBUG00000010519	rpl29	84	59.259	Haplochromis_burtoni
WBGene00004443	rpl-29	81	66.000	ENSHCOG00000000478	rpl29	69	62.963	Hippocampus_comes
WBGene00004443	rpl-29	100	58.065	ENSIPUG00000001196	rpl29	97	58.065	Ictalurus_punctatus
WBGene00004443	rpl-29	87	59.259	ENSKMAG00000011291	rpl29	84	59.259	Kryptolebias_marmoratus
WBGene00004443	rpl-29	87	61.111	ENSLBEG00000016213	rpl29	90	58.065	Labrus_bergylta
WBGene00004443	rpl-29	87	59.259	ENSLACG00000018031	-	79	59.259	Latimeria_chalumnae
WBGene00004443	rpl-29	87	59.259	ENSLACG00000018622	rpl29	84	59.259	Latimeria_chalumnae
WBGene00004443	rpl-29	74	63.043	ENSLOCG00000013798	rpl29	94	55.738	Lepisosteus_oculatus
WBGene00004443	rpl-29	87	61.111	ENSMAMG00000014274	rpl29	55	63.462	Mastacembelus_armatus
WBGene00004443	rpl-29	87	59.259	ENSMZEG00005013519	rpl29	84	59.259	Maylandia_zebra
WBGene00004443	rpl-29	74	65.217	ENSMGAG00000001213	RPL29	79	60.714	Meleagris_gallopavo
WBGene00004443	rpl-29	73	62.222	ENSMICG00000049466	-	68	62.222	Microcebus_murinus
WBGene00004443	rpl-29	87	61.111	ENSMMOG00000010430	rpl29	84	61.111	Mola_mola
WBGene00004443	rpl-29	87	61.111	ENSMALG00000009023	rpl29	69	61.111	Monopterus_albus
WBGene00004443	rpl-29	74	63.043	ENSMUSG00000048758	Rpl29	82	58.929	Mus_musculus
WBGene00004443	rpl-29	87	59.259	ENSNBRG00000022109	rpl29	84	59.259	Neolamprologus_brichardi
WBGene00004443	rpl-29	87	59.259	ENSONIG00000014377	rpl29	86	59.259	Oreochromis_niloticus
WBGene00004443	rpl-29	84	63.462	ENSORLG00000023610	rpl29	55	63.462	Oryzias_latipes
WBGene00004443	rpl-29	84	63.462	ENSORLG00020018665	rpl29	55	63.462	Oryzias_latipes_hni
WBGene00004443	rpl-29	84	63.462	ENSORLG00015014455	rpl29	55	63.462	Oryzias_latipes_hsok
WBGene00004443	rpl-29	87	61.111	ENSOMEG00000019919	rpl29	84	61.111	Oryzias_melastigma
WBGene00004443	rpl-29	60	64.865	ENSPPAG00000037142	-	63	64.865	Pan_paniscus
WBGene00004443	rpl-29	98	49.180	ENSPPRG00000011689	-	88	49.123	Panthera_pardus
WBGene00004443	rpl-29	92	47.368	ENSPTIG00000011913	-	70	47.368	Panthera_tigris_altaica
WBGene00004443	rpl-29	74	63.043	ENSPTRG00000043237	RPL29	63	64.865	Pan_troglodytes
WBGene00004443	rpl-29	74	67.391	ENSPKIG00000025048	rpl29	92	59.016	Paramormyrops_kingsleyae
WBGene00004443	rpl-29	74	63.043	ENSPSIG00000014699	RPL29	89	58.929	Pelodiscus_sinensis
WBGene00004443	rpl-29	87	59.259	ENSPMGG00000005361	rpl29	79	59.259	Periophthalmus_magnuspinnatus
WBGene00004443	rpl-29	87	59.259	ENSPFOG00000011385	rpl29	89	59.259	Poecilia_formosa
WBGene00004443	rpl-29	81	62.000	ENSPLAG00000012042	rpl29	97	53.226	Poecilia_latipinna
WBGene00004443	rpl-29	81	62.000	ENSPMEG00000018297	rpl29	97	53.226	Poecilia_mexicana
WBGene00004443	rpl-29	81	62.000	ENSPREG00000007066	rpl29	97	53.226	Poecilia_reticulata
WBGene00004443	rpl-29	87	59.259	ENSPNYG00000019481	rpl29	84	59.259	Pundamilia_nyererei
WBGene00004443	rpl-29	87	59.259	ENSPNAG00000007550	rpl29	84	59.259	Pygocentrus_nattereri
WBGene00004443	rpl-29	97	46.667	ENSRNOG00000025794	AABR07021239.1	80	46.667	Rattus_norvegicus
WBGene00004443	rpl-29	68	69.048	YFR032C-A	RPL29	71	69.048	Saccharomyces_cerevisiae
WBGene00004443	rpl-29	82	64.706	ENSSMAG00000013571	rpl29	80	64.706	Scophthalmus_maximus
WBGene00004443	rpl-29	81	64.000	ENSSDUG00000016140	rpl29	81	63.462	Seriola_dumerili
WBGene00004443	rpl-29	55	57.143	ENSSDUG00000020458	-	56	57.143	Seriola_dumerili
WBGene00004443	rpl-29	81	64.000	ENSSLDG00000003932	rpl29	81	63.462	Seriola_lalandi_dorsalis
WBGene00004443	rpl-29	74	65.217	ENSSPUG00000003760	RPL29	89	60.714	Sphenodon_punctatus
WBGene00004443	rpl-29	87	61.111	ENSSPAG00000020292	rpl29	84	61.111	Stegastes_partitus
WBGene00004443	rpl-29	60	56.757	ENSSSCG00000037047	-	96	53.191	Sus_scrofa
WBGene00004443	rpl-29	94	46.552	ENSSSCG00000031314	-	92	46.552	Sus_scrofa
WBGene00004443	rpl-29	74	69.565	ENSTGUG00000006027	RPL29	89	64.286	Taeniopygia_guttata
WBGene00004443	rpl-29	84	63.462	ENSTRUG00000022273	rpl29	80	63.462	Takifugu_rubripes
WBGene00004443	rpl-29	84	63.462	ENSTNIG00000014816	rpl29	76	63.462	Tetraodon_nigroviridis
WBGene00004443	rpl-29	90	55.357	ENSTBEG00000000807	-	68	55.357	Tupaia_belangeri
WBGene00004443	rpl-29	73	64.444	ENSUAMG00000002601	-	79	64.444	Ursus_americanus
WBGene00004443	rpl-29	74	60.870	ENSVVUG00000012400	-	98	57.143	Vulpes_vulpes
WBGene00004443	rpl-29	74	63.043	ENSXETG00000010811	rpl29	83	56.452	Xenopus_tropicalis
WBGene00004443	rpl-29	87	59.259	ENSXCOG00000013543	rpl29	84	59.259	Xiphophorus_couchianus
WBGene00004443	rpl-29	87	59.259	ENSXMAG00000020948	rpl29	84	59.259	Xiphophorus_maculatus