EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004450 (Gene tree)
Gene ID: -
Gene Symbol: rpl-36
Alias: -
Full Name: 60S ribosomal protein L36
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 429 bases
Position: chrIII:7180249-7180677
Accession: P49181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F37C12	Ribosomal_L36e	PF01158.18	9.4e-41	1	1
F37C12	Ribosomal_L36e	PF01158.18	9.4e-41	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F37C12.4.1	-	349	NM_066172	F37C12.4.1	104 (aa)	NP_498573	P49181
F37C12.4.2	-	377	NM_066172	F37C12.4.2	104 (aa)	NP_498573	P49181

Gene Model

Click here to download WBGene00004450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004450	rpl-36	90	60.638	ENSCING00000012007	-	96	60.638	Ciona_intestinalis
WBGene00004450	rpl-36	93	61.856	ENSCSAVG00000005153	-	94	61.856	Ciona_savignyi
WBGene00004450	rpl-36	90	53.846	FBgn0002579	RpL36	90	53.846	Drosophila_melanogaster
WBGene00004450	rpl-36	90	50.000	YPL249C-A	RPL36B	94	50.000	Saccharomyces_cerevisiae
WBGene00004450	rpl-36	90	48.936	YMR194W	RPL36A	94	48.936	Saccharomyces_cerevisiae
WBGene00004450	rpl-36	89	52.688	ENSSLDG00000002939	-	82	52.688	Seriola_lalandi_dorsalis