EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00004472 (Gene tree)
Gene ID
-
Gene Symbol
rps-3
Alias
-
Full Name
40S ribosomal protein S3
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Plus strand
Length
1169 bases
Position
chrIII:6206803-6207971
Accession
P48152
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
C23G10KH_2PF07650.171.4e-1111
C23G10Ribosomal_S3_CPF00189.202.1e-2311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
C23G10.3-807NM_065948C23G10.3247 (aa)NP_498349P48152
Gene Model
Click here to download WBGene00004472's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00004472's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00004472rps-39674.684ENSG00000149273RPS39788.571Homo_sapiens
WBGene00004472rps-39155.804ENSAMEG00000007309-9055.804Ailuropoda_melanoleuca
WBGene00004472rps-39674.684ENSAMEG00000017051RPS39474.684Ailuropoda_melanoleuca
WBGene00004472rps-39675.630ENSACIG00000023535rps39775.630Amphilophus_citrinellus
WBGene00004472rps-39675.314ENSAOCG00000013654rps39875.314Amphiprion_ocellaris
WBGene00004472rps-39675.314ENSAPEG00000022808rps39875.314Amphiprion_percula
WBGene00004472rps-39674.895ENSATEG00000003502rps39874.895Anabas_testudineus
WBGene00004472rps-39656.432ENSAPLG00000014513-9756.432Anas_platyrhynchos
WBGene00004472rps-39675.630ENSACAG00000002169-9875.630Anolis_carolinensis
WBGene00004472rps-39663.291ENSANAG00000023438-8971.512Aotus_nancymaae
WBGene00004472rps-39674.684ENSANAG00000027669-9080.952Aotus_nancymaae
WBGene00004472rps-39356.769ENSANAG00000022561-9067.470Aotus_nancymaae
WBGene00004472rps-39675.314ENSACLG00000013763rps39272.727Astatotilapia_calliptera
WBGene00004472rps-39675.314ENSAMXG00000013642rps39875.314Astyanax_mexicanus
WBGene00004472rps-39674.684ENSBTAG00000005620RPS39674.684Bos_taurus
WBGene00004472rps-39674.262ENSCJAG00000015424RPS39080.952Callithrix_jacchus
WBGene00004472rps-39674.684ENSCAFG00000005402RPS39674.684Canis_familiaris
WBGene00004472rps-39674.684ENSCAFG00020002102-9674.684Canis_lupus_dingo
WBGene00004472rps-39674.684ENSCHIG00000012342-9674.684Capra_hircus
WBGene00004472rps-38352.683ENSCHIG00000015952-8452.683Capra_hircus
WBGene00004472rps-39669.874ENSTSYG00000034881-9476.923Carlito_syrichta
WBGene00004472rps-39674.684ENSTSYG00000008664-9181.176Carlito_syrichta
WBGene00004472rps-39375.983ENSCAPG00000016681-9475.983Cavia_aperea
WBGene00004472rps-39674.684ENSCPOG00000004665-9674.684Cavia_porcellus
WBGene00004472rps-39674.684ENSCCAG00000022155RPS39080.952Cebus_capucinus
WBGene00004472rps-38576.555ENSCCAG00000021048-8977.326Cebus_capucinus
WBGene00004472rps-39674.684ENSCATG00000035348-9080.952Cercocebus_atys
WBGene00004472rps-39263.596ENSCATG00000037875-9372.727Cercocebus_atys
WBGene00004472rps-38970.588ENSCATG00000043998-9769.474Cercocebus_atys
WBGene00004472rps-35870.588ENSCATG00000011713-8870.588Cercocebus_atys
WBGene00004472rps-39674.684ENSCLAG00000013819-9674.684Chinchilla_lanigera
WBGene00004472rps-39674.684ENSCSAG00000003937-9674.684Chlorocebus_sabaeus
WBGene00004472rps-39162.389ENSCHOG00000005328-9760.669Choloepus_hoffmanni
WBGene00004472rps-38371.707ENSCPBG00000027671-9571.707Chrysemys_picta_bellii
WBGene00004472rps-39472.845ENSCING00000005003-9270.445Ciona_intestinalis
WBGene00004472rps-39174.554ENSCSAVG00000003490-9371.901Ciona_savignyi
WBGene00004472rps-39674.684ENSCANG00000036026RPS39080.952Colobus_angolensis_palliatus
WBGene00004472rps-39069.058ENSCANG00000041522-9069.730Colobus_angolensis_palliatus
WBGene00004472rps-39674.684ENSCGRG00001013667Rps39381.250Cricetulus_griseus_chok1gshd
WBGene00004472rps-39455.556ENSCGRG00001003744-9455.556Cricetulus_griseus_chok1gshd
WBGene00004472rps-39463.248ENSCGRG00000000152-9863.248Cricetulus_griseus_crigri
WBGene00004472rps-39455.556ENSCGRG00000004849-9455.556Cricetulus_griseus_crigri
WBGene00004472rps-39669.198ENSCGRG00000019934-9669.198Cricetulus_griseus_crigri
WBGene00004472rps-39672.689ENSCGRG00000004739-9482.249Cricetulus_griseus_crigri
WBGene00004472rps-39675.630ENSCSEG00000014436rps39775.630Cynoglossus_semilaevis
WBGene00004472rps-39675.210ENSCVAG00000009247rps39775.210Cyprinodon_variegatus
WBGene00004472rps-39675.732ENSDARG00000103007rps39875.732Danio_rerio
WBGene00004472rps-39158.850ENSDNOG00000014888-9258.850Dasypus_novemcinctus
WBGene00004472rps-39674.684ENSDNOG00000037189-9369.767Dasypus_novemcinctus
WBGene00004472rps-39661.506ENSDNOG00000032230-9661.506Dasypus_novemcinctus
WBGene00004472rps-39674.684ENSDORG00000002974Rps39674.684Dipodomys_ordii
WBGene00004472rps-37361.667ENSDORG00000025518-9866.949Dipodomys_ordii
WBGene00004472rps-39371.616FBgn0002622RpS39371.616Drosophila_melanogaster
WBGene00004472rps-37774.346ENSETEG00000015500-7974.346Echinops_telfairi
WBGene00004472rps-35963.830ENSEBUG00000003683rps38663.830Eptatretus_burgeri
WBGene00004472rps-39674.684ENSEASG00005014248-8374.684Equus_asinus_asinus
WBGene00004472rps-39674.684ENSECAG00000013915-8374.684Equus_caballus
WBGene00004472rps-39672.574ENSEEUG00000014531-9672.574Erinaceus_europaeus
WBGene00004472rps-39374.672ENSELUG00000017575-9872.614Esox_lucius
WBGene00004472rps-39873.859ENSELUG00000024369-9773.859Esox_lucius
WBGene00004472rps-36654.601ENSFCAG00000033114-9354.601Felis_catus
WBGene00004472rps-39674.684ENSFCAG00000011942-9674.684Felis_catus
WBGene00004472rps-39675.210ENSFALG00000007956-7475.210Ficedula_albicollis
WBGene00004472rps-36358.696ENSFDAG00000012411-10058.696Fukomys_damarensis
WBGene00004472rps-39674.684ENSFDAG00000016319-9674.684Fukomys_damarensis
WBGene00004472rps-39675.732ENSFHEG00000022153rps39875.732Fundulus_heteroclitus
WBGene00004472rps-39873.967ENSGMOG00000000838rps39873.967Gadus_morhua
WBGene00004472rps-39675.210ENSGALG00000017330-9875.210Gallus_gallus
WBGene00004472rps-39476.623ENSGAFG00000015709rps39476.623Gambusia_affinis
WBGene00004472rps-39674.059ENSGACG00000013384rps39874.059Gasterosteus_aculeatus
WBGene00004472rps-39675.210ENSGAGG00000012704-9875.210Gopherus_agassizii
WBGene00004472rps-35855.556ENSGAGG00000022297-8155.556Gopherus_agassizii
WBGene00004472rps-39663.291ENSGGOG00000038504-8369.474Gorilla_gorilla
WBGene00004472rps-39674.684ENSGGOG00000006519RPS39080.952Gorilla_gorilla
WBGene00004472rps-39669.915ENSGGOG00000026674-9369.915Gorilla_gorilla
WBGene00004472rps-39661.441ENSGGOG00000022405-7769.474Gorilla_gorilla
WBGene00004472rps-39675.314ENSHBUG00000002368rps39875.314Haplochromis_burtoni
WBGene00004472rps-39674.790ENSHGLG00000019339RPS39874.790Heterocephalus_glaber_female
WBGene00004472rps-39674.790ENSHGLG00100012857RPS39874.790Heterocephalus_glaber_male
WBGene00004472rps-39376.957ENSHCOG00000005060rps39376.957Hippocampus_comes
WBGene00004472rps-39675.314ENSIPUG00000005685rps39875.314Ictalurus_punctatus
WBGene00004472rps-39674.684ENSSTOG00000028813-9674.684Ictidomys_tridecemlineatus
WBGene00004472rps-39674.684ENSJJAG00000018981Rps39674.684Jaculus_jaculus
WBGene00004472rps-36980.117ENSJJAG00000017023-9480.117Jaculus_jaculus
WBGene00004472rps-39675.630ENSKMAG00000009747rps39775.630Kryptolebias_marmoratus
WBGene00004472rps-39674.895ENSLBEG00000021017rps39874.895Labrus_bergylta
WBGene00004472rps-39675.210ENSLACG00000006132-9875.210Latimeria_chalumnae
WBGene00004472rps-39974.694ENSLOCG00000006405rps39974.694Lepisosteus_oculatus
WBGene00004472rps-39674.684ENSLAFG00000004297-9674.684Loxodonta_africana
WBGene00004472rps-39674.684ENSMFAG00000000525RPS39080.952Macaca_fascicularis
WBGene00004472rps-38370.588ENSMMUG00000045640-9270.588Macaca_mulatta
WBGene00004472rps-36866.667ENSMMUG00000037851-7866.667Macaca_mulatta
WBGene00004472rps-39674.684ENSMMUG00000009019RPS39775.983Macaca_mulatta
WBGene00004472rps-39674.684ENSMNEG00000032069-9080.952Macaca_nemestrina
WBGene00004472rps-38370.588ENSMNEG00000030799-9266.176Macaca_nemestrina
WBGene00004472rps-39674.684ENSMLEG00000027047RPS39080.952Mandrillus_leucophaeus
WBGene00004472rps-38374.020ENSMLEG00000017301-9269.118Mandrillus_leucophaeus
WBGene00004472rps-39664.831ENSMLEG00000044314-9664.831Mandrillus_leucophaeus
WBGene00004472rps-39262.719ENSMLEG00000032606-9372.727Mandrillus_leucophaeus
WBGene00004472rps-39875.104ENSMAMG00000020146rps39875.104Mastacembelus_armatus
WBGene00004472rps-39675.314ENSMZEG00005024678rps39766.109Maylandia_zebra
WBGene00004472rps-39753.333ENSMAUG00000015088-9953.333Mesocricetus_auratus
WBGene00004472rps-39072.646ENSMAUG00000006329-9172.646Mesocricetus_auratus
WBGene00004472rps-39674.684ENSMAUG00000012031-9674.684Mesocricetus_auratus
WBGene00004472rps-39665.966ENSMICG00000033427-9663.025Microcebus_murinus
WBGene00004472rps-39674.684ENSMICG00000030910-9080.952Microcebus_murinus
WBGene00004472rps-39674.684ENSMOCG00000007699Rps39674.684Microtus_ochrogaster
WBGene00004472rps-39874.590ENSMMOG00000005152rps39974.590Mola_mola
WBGene00004472rps-39674.790ENSMODG00000006945-9874.790Monodelphis_domestica
WBGene00004472rps-39775.519ENSMALG00000021156rps39975.519Monopterus_albus
WBGene00004472rps-39674.684MGP_CAROLIEiJ_G0030029Rps39674.684Mus_caroli
WBGene00004472rps-39674.684ENSMUSG00000030744Rps39674.684Mus_musculus
WBGene00004472rps-39674.684MGP_PahariEiJ_G0013250Rps39781.250Mus_pahari
WBGene00004472rps-39674.684MGP_SPRETEiJ_G0031139Rps39674.684Mus_spretus
WBGene00004472rps-39674.684ENSMPUG00000009197-9674.684Mustela_putorius_furo
WBGene00004472rps-39458.190ENSMLUG00000026956-9558.190Myotis_lucifugus
WBGene00004472rps-39457.082ENSMLUG00000025123-9557.082Myotis_lucifugus
WBGene00004472rps-39675.000ENSMLUG00000004079-9675.000Myotis_lucifugus
WBGene00004472rps-39674.684ENSNGAG00000015514Rps39080.838Nannospalax_galili
WBGene00004472rps-39675.314ENSNBRG00000006241rps39875.314Neolamprologus_brichardi
WBGene00004472rps-39267.105ENSNLEG00000027260-9564.035Nomascus_leucogenys
WBGene00004472rps-37475.543ENSNLEG00000036221-9575.543Nomascus_leucogenys
WBGene00004472rps-35673.188ENSNLEG00000029322-9773.188Nomascus_leucogenys
WBGene00004472rps-39774.167ENSMEUG00000011581-9674.167Notamacropus_eugenii
WBGene00004472rps-37078.571ENSOPRG00000009496-7078.571Ochotona_princeps
WBGene00004472rps-39674.262ENSODEG00000004564-9674.262Octodon_degus
WBGene00004472rps-39566.949ENSODEG00000002537-9766.949Octodon_degus
WBGene00004472rps-36269.481ENSODEG00000001789-9769.481Octodon_degus
WBGene00004472rps-39166.964ENSODEG00000000640-9266.964Octodon_degus
WBGene00004472rps-36475.000ENSODEG00000006804-9475.000Octodon_degus
WBGene00004472rps-39875.104ENSONIG00000001263rps38675.104Oreochromis_niloticus
WBGene00004472rps-38565.403ENSOANG00000009953-10065.403Ornithorhynchus_anatinus
WBGene00004472rps-39571.915ENSOCUG00000024686-9671.915Oryctolagus_cuniculus
WBGene00004472rps-39674.684ENSOCUG00000022412-8374.684Oryctolagus_cuniculus
WBGene00004472rps-39675.314ENSORLG00000000607rps39875.314Oryzias_latipes
WBGene00004472rps-39675.314ENSORLG00020021035rps39875.314Oryzias_latipes_hni
WBGene00004472rps-39675.314ENSORLG00015010080rps39875.314Oryzias_latipes_hsok
WBGene00004472rps-36671.951ENSOMEG00000020705rps39171.951Oryzias_melastigma
WBGene00004472rps-39674.370ENSOGAG00000005318RPS39674.370Otolemur_garnettii
WBGene00004472rps-39674.684ENSOARG00000011523RPS38374.684Ovis_aries
WBGene00004472rps-39674.684ENSPPAG00000029211RPS39080.952Pan_paniscus
WBGene00004472rps-39665.401ENSPPAG00000039573-8865.401Pan_paniscus
WBGene00004472rps-39072.072ENSPPAG00000033710-8972.072Pan_paniscus
WBGene00004472rps-39674.684ENSPPRG00000021200-9674.684Panthera_pardus
WBGene00004472rps-39674.684ENSPTIG00000012777-9674.684Panthera_tigris_altaica
WBGene00004472rps-39674.684ENSPTRG00000048574RPS39080.952Pan_troglodytes
WBGene00004472rps-39670.042ENSPTRG00000015680-8776.111Pan_troglodytes
WBGene00004472rps-39665.823ENSPTRG00000047374-8863.136Pan_troglodytes
WBGene00004472rps-36469.118ENSPANG00000032441-9469.118Papio_anubis
WBGene00004472rps-39669.960ENSPANG00000016549-9080.952Papio_anubis
WBGene00004472rps-39164.889ENSPANG00000033652-9972.857Papio_anubis
WBGene00004472rps-39675.210ENSPKIG00000024046rps39775.210Paramormyrops_kingsleyae
WBGene00004472rps-39675.210ENSPSIG00000008818-9875.210Pelodiscus_sinensis
WBGene00004472rps-39875.104ENSPMGG00000012744rps39875.104Periophthalmus_magnuspinnatus
WBGene00004472rps-39660.251ENSPEMG00000020704-9760.251Peromyscus_maniculatus_bairdii
WBGene00004472rps-38360.294ENSPEMG00000022426-8860.294Peromyscus_maniculatus_bairdii
WBGene00004472rps-39674.684ENSPEMG00000021741-9674.684Peromyscus_maniculatus_bairdii
WBGene00004472rps-37879.793ENSPMAG00000007775-9779.793Petromyzon_marinus
WBGene00004472rps-35974.074ENSPCIG00000022539-9274.074Phascolarctos_cinereus
WBGene00004472rps-37169.318ENSPCIG00000030274-8669.318Phascolarctos_cinereus
WBGene00004472rps-39774.167ENSPCIG00000024144-9674.167Phascolarctos_cinereus
WBGene00004472rps-39476.623ENSPFOG00000013835rps39476.623Poecilia_formosa
WBGene00004472rps-39476.623ENSPLAG00000005854rps39476.623Poecilia_latipinna
WBGene00004472rps-39476.623ENSPMEG00000020999rps39476.623Poecilia_mexicana
WBGene00004472rps-39476.623ENSPREG00000017536rps39476.623Poecilia_reticulata
WBGene00004472rps-39674.684ENSPPYG00000003688RPS39674.684Pongo_abelii
WBGene00004472rps-37575.269ENSPCAG00000003033-7575.269Procavia_capensis
WBGene00004472rps-38161.692ENSPCOG00000024652-8865.487Propithecus_coquereli
WBGene00004472rps-39069.955ENSPCOG00000026192-9672.340Propithecus_coquereli
WBGene00004472rps-39674.684ENSPCOG00000028750RPS39080.952Propithecus_coquereli
WBGene00004472rps-39669.198ENSPVAG00000011271-9669.198Pteropus_vampyrus
WBGene00004472rps-39675.314ENSPNYG00000007419rps39875.314Pundamilia_nyererei
WBGene00004472rps-39675.314ENSPNAG00000018641rps39875.314Pygocentrus_nattereri
WBGene00004472rps-35768.116ENSRNOG00000056660AABR07025928.110068.116Rattus_norvegicus
WBGene00004472rps-39671.730ENSRNOG00000007605AABR07052430.19671.730Rattus_norvegicus
WBGene00004472rps-39674.684ENSRNOG00000017418Rps39674.684Rattus_norvegicus
WBGene00004472rps-39674.684ENSRBIG00000044916RPS39080.952Rhinopithecus_bieti
WBGene00004472rps-39664.979ENSRBIG00000040846-9370.833Rhinopithecus_bieti
WBGene00004472rps-35279.845ENSRBIG00000042266-9079.845Rhinopithecus_bieti
WBGene00004472rps-37162.286ENSRBIG00000012001-9262.286Rhinopithecus_bieti
WBGene00004472rps-39262.281ENSRBIG00000033623-9372.727Rhinopithecus_bieti
WBGene00004472rps-39658.051ENSRROG00000039887-9552.119Rhinopithecus_roxellana
WBGene00004472rps-39375.983ENSRROG00000032977-9381.356Rhinopithecus_roxellana
WBGene00004472rps-35279.070ENSRROG00000039976-9079.070Rhinopithecus_roxellana
WBGene00004472rps-35375.362ENSRROG00000037141-10075.362Rhinopithecus_roxellana
WBGene00004472rps-39674.684ENSRROG00000009870RPS39080.952Rhinopithecus_roxellana
WBGene00004472rps-38664.789YNL178WRPS38864.789Saccharomyces_cerevisiae
WBGene00004472rps-38760.280ENSSBOG00000024651-8260.280Saimiri_boliviensis_boliviensis
WBGene00004472rps-39169.298ENSSBOG00000021803-9169.298Saimiri_boliviensis_boliviensis
WBGene00004472rps-39674.684ENSSBOG00000021847-9674.684Saimiri_boliviensis_boliviensis
WBGene00004472rps-39773.029ENSSHAG00000011198-9773.029Sarcophilus_harrisii
WBGene00004472rps-39675.314ENSSFOG00015002290rps39875.314Scleropages_formosus
WBGene00004472rps-39674.380ENSSMAG00000004341rps39874.380Scophthalmus_maximus
WBGene00004472rps-39675.314ENSSDUG00000004327rps39875.314Seriola_dumerili
WBGene00004472rps-35577.778ENSSLDG00000007403-9977.778Seriola_lalandi_dorsalis
WBGene00004472rps-39675.314ENSSLDG00000018053rps39875.314Seriola_lalandi_dorsalis
WBGene00004472rps-39475.000ENSSARG00000006979-9675.000Sorex_araneus
WBGene00004472rps-39376.957ENSSPUG00000017181-9876.957Sphenodon_punctatus
WBGene00004472rps-39875.104ENSSPAG00000022245rps39875.104Stegastes_partitus
WBGene00004472rps-39674.684ENSSSCG00000014855RPS39674.684Sus_scrofa
WBGene00004472rps-38753.488ENSSSCG00000036413-9153.488Sus_scrofa
WBGene00004472rps-36170.861ENSTGUG00000013480-9970.861Taeniopygia_guttata
WBGene00004472rps-39675.314ENSTRUG00000023549rps39875.314Takifugu_rubripes
WBGene00004472rps-39674.684ENSTBEG00000007053-9674.684Tupaia_belangeri
WBGene00004472rps-39674.684ENSTTRG00000005858RPS39674.684Tursiops_truncatus
WBGene00004472rps-39674.684ENSUAMG00000021546-9674.684Ursus_americanus
WBGene00004472rps-39674.684ENSUMAG00000010808-9674.684Ursus_maritimus
WBGene00004472rps-39674.684ENSVPAG00000011615RPS39674.684Vicugna_pacos
WBGene00004472rps-36163.441ENSVVUG00000018431-9763.441Vulpes_vulpes
WBGene00004472rps-39674.684ENSVVUG00000024353-9674.684Vulpes_vulpes
WBGene00004472rps-39276.754ENSXETG00000010729rps39675.210Xenopus_tropicalis
WBGene00004472rps-39476.623ENSXCOG00000012468rps39476.623Xiphophorus_couchianus
WBGene00004472rps-39476.623ENSXMAG00000004703rps39476.623Xiphophorus_maculatus

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