EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004474 (Gene tree)
Gene ID: -
Gene Symbol: rps-5
Alias: -
Full Name: 40S ribosomal protein S5
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 944 bases
Position: chrIV:11110102-11111045
Accession: P49041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T05E11	Ribosomal_S7	PF00177.21	2.1e-35	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T05E11.1	-	748	NM_069676	T05E11.1	210 (aa)	NP_502077	P49041

Gene Model

Click here to download WBGene00004474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004474's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004474	rps-5	94	86.364	ENSG00000083845	RPS5	97	86.364	Homo_sapiens
WBGene00004474	rps-5	94	85.427	ENSAPOG00000023785	rps5	98	85.427	Acanthochromis_polyacanthus
WBGene00004474	rps-5	94	86.364	ENSAMEG00000007431	RPS5	97	86.364	Ailuropoda_melanoleuca
WBGene00004474	rps-5	94	85.427	ENSACIG00000007319	rps5	98	85.427	Amphilophus_citrinellus
WBGene00004474	rps-5	85	83.333	ENSAOCG00000021297	rps5	78	83.333	Amphiprion_ocellaris
WBGene00004474	rps-5	93	86.294	ENSAOCG00000010721	RPS5	97	86.294	Amphiprion_ocellaris
WBGene00004474	rps-5	97	69.417	ENSAPEG00000010045	rps5	99	69.417	Amphiprion_percula
WBGene00004474	rps-5	94	85.427	ENSATEG00000007911	rps5	98	85.427	Anabas_testudineus
WBGene00004474	rps-5	94	85.427	ENSACAG00000010996	RPS5	98	85.427	Anolis_carolinensis
WBGene00004474	rps-5	94	64.646	ENSANAG00000035789	-	96	65.537	Aotus_nancymaae
WBGene00004474	rps-5	94	86.364	ENSANAG00000020231	-	97	86.364	Aotus_nancymaae
WBGene00004474	rps-5	94	84.343	ENSANAG00000023153	-	92	84.343	Aotus_nancymaae
WBGene00004474	rps-5	94	85.427	ENSACLG00000007312	rps5	98	85.427	Astatotilapia_calliptera
WBGene00004474	rps-5	94	84.925	ENSAMXG00000029764	rps5	98	84.925	Astyanax_mexicanus
WBGene00004474	rps-5	94	86.364	ENSBTAG00000015989	RPS5	97	86.364	Bos_taurus
WBGene00004474	rps-5	94	86.364	ENSCJAG00000000304	RPS5	94	86.364	Callithrix_jacchus
WBGene00004474	rps-5	94	86.364	ENSCAFG00000002366	RPS5	97	86.364	Canis_familiaris
WBGene00004474	rps-5	94	83.010	ENSCAFG00020014863	-	97	83.010	Canis_lupus_dingo
WBGene00004474	rps-5	94	86.364	ENSCHIG00000019536	RPS5	97	86.364	Capra_hircus
WBGene00004474	rps-5	94	86.364	ENSTSYG00000000076	-	97	86.364	Carlito_syrichta
WBGene00004474	rps-5	83	88.571	ENSCAPG00000017186	RPS5	86	88.571	Cavia_aperea
WBGene00004474	rps-5	94	86.364	ENSCPOG00000023995	RPS5	97	86.364	Cavia_porcellus
WBGene00004474	rps-5	93	60.914	ENSCCAG00000021605	-	96	60.914	Cebus_capucinus
WBGene00004474	rps-5	94	71.574	ENSCCAG00000036875	-	91	71.574	Cebus_capucinus
WBGene00004474	rps-5	94	86.364	ENSCCAG00000020744	-	97	86.364	Cebus_capucinus
WBGene00004474	rps-5	94	86.364	ENSCATG00000030198	RPS5	97	86.364	Cercocebus_atys
WBGene00004474	rps-5	94	73.737	ENSCATG00000040451	-	91	73.737	Cercocebus_atys
WBGene00004474	rps-5	94	86.364	ENSCLAG00000000313	RPS5	97	86.364	Chinchilla_lanigera
WBGene00004474	rps-5	72	57.616	ENSCSAG00000015430	-	94	57.616	Chlorocebus_sabaeus
WBGene00004474	rps-5	91	66.839	ENSCSAG00000009927	-	93	66.839	Chlorocebus_sabaeus
WBGene00004474	rps-5	94	86.364	ENSCSAG00000001598	RPS5	97	86.364	Chlorocebus_sabaeus
WBGene00004474	rps-5	94	85.427	ENSCPBG00000013028	RPS5	98	85.427	Chrysemys_picta_bellii
WBGene00004474	rps-5	100	77.619	ENSCING00000002448	-	100	77.619	Ciona_intestinalis
WBGene00004474	rps-5	100	77.619	ENSCSAVG00000005966	-	100	77.619	Ciona_savignyi
WBGene00004474	rps-5	93	60.204	ENSCANG00000003782	-	88	60.204	Colobus_angolensis_palliatus
WBGene00004474	rps-5	94	86.364	ENSCANG00000032591	RPS5	97	86.364	Colobus_angolensis_palliatus
WBGene00004474	rps-5	93	61.307	ENSCANG00000028788	-	96	61.307	Colobus_angolensis_palliatus
WBGene00004474	rps-5	50	78.095	ENSCANG00000011369	-	64	78.095	Colobus_angolensis_palliatus
WBGene00004474	rps-5	94	85.859	ENSCGRG00001014197	Rps5	97	85.859	Cricetulus_griseus_chok1gshd
WBGene00004474	rps-5	91	72.917	ENSCGRG00000011329	Rps5	94	72.917	Cricetulus_griseus_crigri
WBGene00004474	rps-5	94	85.427	ENSCSEG00000011153	rps5	98	85.427	Cynoglossus_semilaevis
WBGene00004474	rps-5	55	68.966	ENSCVAG00000023171	RPS5	71	68.966	Cyprinodon_variegatus
WBGene00004474	rps-5	52	88.991	ENSCVAG00000008716	rps5	89	88.991	Cyprinodon_variegatus
WBGene00004474	rps-5	100	81.043	ENSDARG00000043453	rps5	100	81.043	Danio_rerio
WBGene00004474	rps-5	94	67.677	ENSDNOG00000037158	-	86	67.677	Dasypus_novemcinctus
WBGene00004474	rps-5	94	85.859	ENSDNOG00000047505	-	97	85.859	Dasypus_novemcinctus
WBGene00004474	rps-5	89	65.775	ENSDORG00000023488	-	96	64.286	Dipodomys_ordii
WBGene00004474	rps-5	94	85.859	ENSDORG00000002165	-	97	85.859	Dipodomys_ordii
WBGene00004474	rps-5	92	83.938	FBgn0002590	RpS5a	85	83.938	Drosophila_melanogaster
WBGene00004474	rps-5	99	75.598	FBgn0038277	RpS5b	91	75.598	Drosophila_melanogaster
WBGene00004474	rps-5	94	69.697	ENSETEG00000013543	-	97	69.697	Echinops_telfairi
WBGene00004474	rps-5	80	78.824	ENSEBUG00000008049	-	69	78.824	Eptatretus_burgeri
WBGene00004474	rps-5	94	86.364	ENSEASG00005020216	RPS5	97	86.364	Equus_asinus_asinus
WBGene00004474	rps-5	83	84.659	ENSECAG00000016340	RPS5	51	84.659	Equus_caballus
WBGene00004474	rps-5	94	84.925	ENSELUG00000007527	RS5	97	85.787	Esox_lucius
WBGene00004474	rps-5	94	84.772	ENSELUG00000007427	rs5	98	84.772	Esox_lucius
WBGene00004474	rps-5	94	86.364	ENSFCAG00000027978	RPS5	97	86.364	Felis_catus
WBGene00004474	rps-5	94	86.364	ENSFDAG00000010753	RPS5	97	86.364	Fukomys_damarensis
WBGene00004474	rps-5	94	85.427	ENSFHEG00000009134	rps5	98	85.427	Fundulus_heteroclitus
WBGene00004474	rps-5	94	84.925	ENSGMOG00000015218	rps5	98	84.925	Gadus_morhua
WBGene00004474	rps-5	94	85.427	ENSGAFG00000002691	rps5	98	85.427	Gambusia_affinis
WBGene00004474	rps-5	94	85.427	ENSGACG00000002835	rps5	98	85.427	Gasterosteus_aculeatus
WBGene00004474	rps-5	94	85.427	ENSGAGG00000008180	RPS5	98	85.427	Gopherus_agassizii
WBGene00004474	rps-5	85	72.432	ENSGGOG00000025551	-	91	72.872	Gorilla_gorilla
WBGene00004474	rps-5	94	56.716	ENSGGOG00000022062	-	98	56.716	Gorilla_gorilla
WBGene00004474	rps-5	94	86.364	ENSGGOG00000004258	RPS5	97	86.364	Gorilla_gorilla
WBGene00004474	rps-5	88	81.183	ENSGGOG00000024360	-	89	81.183	Gorilla_gorilla
WBGene00004474	rps-5	92	73.869	ENSGGOG00000041414	-	93	73.869	Gorilla_gorilla
WBGene00004474	rps-5	92	70.984	ENSGGOG00000026021	-	97	70.984	Gorilla_gorilla
WBGene00004474	rps-5	94	85.427	ENSHBUG00000009305	rps5	98	85.427	Haplochromis_burtoni
WBGene00004474	rps-5	94	86.364	ENSHGLG00000007229	RPS5	97	86.364	Heterocephalus_glaber_female
WBGene00004474	rps-5	94	86.364	ENSHGLG00100013944	RPS5	97	86.364	Heterocephalus_glaber_male
WBGene00004474	rps-5	94	85.427	ENSHCOG00000007396	rps5	98	85.427	Hippocampus_comes
WBGene00004474	rps-5	94	85.427	ENSIPUG00000004835	rps5	98	85.427	Ictalurus_punctatus
WBGene00004474	rps-5	94	86.364	ENSSTOG00000005935	-	97	86.364	Ictidomys_tridecemlineatus
WBGene00004474	rps-5	90	68.063	ENSSTOG00000029731	-	90	68.063	Ictidomys_tridecemlineatus
WBGene00004474	rps-5	94	86.364	ENSJJAG00000002076	Rps5	97	86.364	Jaculus_jaculus
WBGene00004474	rps-5	94	85.427	ENSKMAG00000012994	rps5	98	85.427	Kryptolebias_marmoratus
WBGene00004474	rps-5	94	80.402	ENSLBEG00000019288	rps5	98	80.402	Labrus_bergylta
WBGene00004474	rps-5	96	84.158	ENSLBEG00000007150	RPS5	98	85.427	Labrus_bergylta
WBGene00004474	rps-5	94	84.925	ENSLACG00000009935	RPS5	98	84.925	Latimeria_chalumnae
WBGene00004474	rps-5	68	47.619	ENSLOCG00000000731	-	97	47.619	Lepisosteus_oculatus
WBGene00004474	rps-5	94	86.364	ENSLAFG00000008734	RPS5	97	86.364	Loxodonta_africana
WBGene00004474	rps-5	93	59.799	ENSMFAG00000002785	-	97	59.799	Macaca_fascicularis
WBGene00004474	rps-5	94	86.364	ENSMFAG00000002766	RPS5	97	86.364	Macaca_fascicularis
WBGene00004474	rps-5	94	61.616	ENSMFAG00000042136	-	90	62.564	Macaca_fascicularis
WBGene00004474	rps-5	94	86.364	ENSMMUG00000008729	RPS5	97	86.364	Macaca_mulatta
WBGene00004474	rps-5	94	61.111	ENSMMUG00000018997	-	96	61.111	Macaca_mulatta
WBGene00004474	rps-5	93	59.799	ENSMMUG00000042835	-	97	59.799	Macaca_mulatta
WBGene00004474	rps-5	92	62.564	ENSMNEG00000031381	-	88	62.564	Macaca_nemestrina
WBGene00004474	rps-5	94	76.263	ENSMNEG00000042225	-	94	76.263	Macaca_nemestrina
WBGene00004474	rps-5	94	86.364	ENSMNEG00000039816	RPS5	97	86.364	Macaca_nemestrina
WBGene00004474	rps-5	94	62.121	ENSMLEG00000031826	-	90	63.077	Mandrillus_leucophaeus
WBGene00004474	rps-5	94	86.364	ENSMLEG00000028037	RPS5	97	86.364	Mandrillus_leucophaeus
WBGene00004474	rps-5	93	60.302	ENSMLEG00000040248	-	96	60.302	Mandrillus_leucophaeus
WBGene00004474	rps-5	94	67.172	ENSMLEG00000035638	-	97	67.172	Mandrillus_leucophaeus
WBGene00004474	rps-5	94	85.427	ENSMAMG00000002747	rps5	98	85.427	Mastacembelus_armatus
WBGene00004474	rps-5	94	85.427	ENSMZEG00005026435	rps5	98	85.427	Maylandia_zebra
WBGene00004474	rps-5	94	85.859	ENSMAUG00000010731	Rps5	97	85.859	Mesocricetus_auratus
WBGene00004474	rps-5	94	86.364	ENSMICG00000016512	RPS5	97	86.364	Microcebus_murinus
WBGene00004474	rps-5	90	69.312	ENSMOCG00000017884	-	100	69.312	Microtus_ochrogaster
WBGene00004474	rps-5	94	85.859	ENSMOCG00000022992	-	97	85.859	Microtus_ochrogaster
WBGene00004474	rps-5	94	85.427	ENSMMOG00000014650	rps5	98	85.427	Mola_mola
WBGene00004474	rps-5	94	85.427	ENSMALG00000009648	rps5	98	85.427	Monopterus_albus
WBGene00004474	rps-5	94	85.859	MGP_CAROLIEiJ_G0029192	Rps5	97	85.859	Mus_caroli
WBGene00004474	rps-5	94	85.859	ENSMUSG00000012848	Rps5	97	85.859	Mus_musculus
WBGene00004474	rps-5	94	85.859	MGP_PahariEiJ_G0021054	Rps5	97	85.859	Mus_pahari
WBGene00004474	rps-5	94	85.859	MGP_SPRETEiJ_G0030268	Rps5	97	85.859	Mus_spretus
WBGene00004474	rps-5	80	91.667	ENSMPUG00000008308	RPS5	99	91.667	Mustela_putorius_furo
WBGene00004474	rps-5	94	84.925	ENSMLUG00000012641	RPS5	97	84.925	Myotis_lucifugus
WBGene00004474	rps-5	94	85.859	ENSNGAG00000015766	Rps5	97	85.859	Nannospalax_galili
WBGene00004474	rps-5	94	85.427	ENSNBRG00000018402	rps5	98	85.427	Neolamprologus_brichardi
WBGene00004474	rps-5	88	78.495	ENSNLEG00000018478	-	89	78.495	Nomascus_leucogenys
WBGene00004474	rps-5	50	58.654	ENSNLEG00000034909	-	62	58.654	Nomascus_leucogenys
WBGene00004474	rps-5	93	73.096	ENSNLEG00000034160	-	96	73.096	Nomascus_leucogenys
WBGene00004474	rps-5	94	69.192	ENSNLEG00000031782	-	91	69.192	Nomascus_leucogenys
WBGene00004474	rps-5	60	96.032	ENSMEUG00000015400	-	66	96.032	Notamacropus_eugenii
WBGene00004474	rps-5	94	86.364	ENSODEG00000000899	-	97	86.364	Octodon_degus
WBGene00004474	rps-5	93	73.604	ENSODEG00000018813	-	97	73.604	Octodon_degus
WBGene00004474	rps-5	94	85.427	ENSONIG00000019659	rps5	98	85.427	Oreochromis_niloticus
WBGene00004474	rps-5	80	91.667	ENSOANG00000011921	RPS5	99	91.667	Ornithorhynchus_anatinus
WBGene00004474	rps-5	94	86.364	ENSOCUG00000024505	RPS5	97	86.364	Oryctolagus_cuniculus
WBGene00004474	rps-5	94	85.427	ENSORLG00000022059	rps5	98	85.427	Oryzias_latipes
WBGene00004474	rps-5	94	85.427	ENSORLG00020008989	rps5	98	85.427	Oryzias_latipes_hni
WBGene00004474	rps-5	94	85.427	ENSORLG00015016306	rps5	98	85.427	Oryzias_latipes_hsok
WBGene00004474	rps-5	98	82.692	ENSOMEG00000008257	rps5	98	85.427	Oryzias_melastigma
WBGene00004474	rps-5	94	86.364	ENSOGAG00000013088	RPS5	97	86.364	Otolemur_garnettii
WBGene00004474	rps-5	94	86.364	ENSOARG00000003848	RPS5	97	86.364	Ovis_aries
WBGene00004474	rps-5	94	86.364	ENSPPAG00000039568	RPS5	97	86.364	Pan_paniscus
WBGene00004474	rps-5	94	58.706	ENSPPAG00000037379	-	98	58.706	Pan_paniscus
WBGene00004474	rps-5	92	69.948	ENSPPAG00000029021	-	97	69.948	Pan_paniscus
WBGene00004474	rps-5	94	78.788	ENSPPAG00000037203	-	76	78.788	Pan_paniscus
WBGene00004474	rps-5	94	86.364	ENSPPRG00000003031	RPS5	97	86.364	Panthera_pardus
WBGene00004474	rps-5	94	86.364	ENSPTIG00000019819	RPS5	97	86.364	Panthera_tigris_altaica
WBGene00004474	rps-5	94	86.364	ENSPTRG00000011591	RPS5	97	86.364	Pan_troglodytes
WBGene00004474	rps-5	98	71.359	ENSPTRG00000049193	-	97	73.737	Pan_troglodytes
WBGene00004474	rps-5	91	68.750	ENSPTRG00000045137	-	97	68.750	Pan_troglodytes
WBGene00004474	rps-5	94	59.204	ENSPTRG00000051381	-	98	59.204	Pan_troglodytes
WBGene00004474	rps-5	94	76.263	ENSPTRG00000051033	-	74	86.735	Pan_troglodytes
WBGene00004474	rps-5	94	62.626	ENSPANG00000029789	-	90	63.590	Papio_anubis
WBGene00004474	rps-5	80	91.667	ENSPANG00000014392	RPS5	90	91.667	Papio_anubis
WBGene00004474	rps-5	94	85.427	ENSPKIG00000011575	rps5	98	85.427	Paramormyrops_kingsleyae
WBGene00004474	rps-5	94	85.427	ENSPMGG00000000854	rps5	99	86.294	Periophthalmus_magnuspinnatus
WBGene00004474	rps-5	94	85.859	ENSPEMG00000015167	Rps5	97	85.859	Peromyscus_maniculatus_bairdii
WBGene00004474	rps-5	94	86.364	ENSPCIG00000026774	RPS5	97	86.364	Phascolarctos_cinereus
WBGene00004474	rps-5	94	85.427	ENSPFOG00000002010	rps5	98	85.427	Poecilia_formosa
WBGene00004474	rps-5	94	85.427	ENSPLAG00000009866	rps5	98	85.427	Poecilia_latipinna
WBGene00004474	rps-5	94	85.427	ENSPMEG00000005285	rps5	98	85.427	Poecilia_mexicana
WBGene00004474	rps-5	98	82.297	ENSPREG00000001896	rps5	85	82.297	Poecilia_reticulata
WBGene00004474	rps-5	94	85.859	ENSPPYG00000010500	RPS5	97	85.859	Pongo_abelii
WBGene00004474	rps-5	94	86.364	ENSPCAG00000011034	RPS5	97	86.364	Procavia_capensis
WBGene00004474	rps-5	94	86.364	ENSPCOG00000016007	RPS5	97	86.364	Propithecus_coquereli
WBGene00004474	rps-5	94	86.364	ENSPVAG00000013966	RPS5	97	86.364	Pteropus_vampyrus
WBGene00004474	rps-5	94	85.427	ENSPNYG00000016183	rps5	98	85.427	Pundamilia_nyererei
WBGene00004474	rps-5	94	85.427	ENSPNAG00000014022	rps5	98	85.427	Pygocentrus_nattereri
WBGene00004474	rps-5	94	85.859	ENSRNOG00000019453	Rps5	97	85.859	Rattus_norvegicus
WBGene00004474	rps-5	94	86.364	ENSRBIG00000027783	RPS5	97	86.364	Rhinopithecus_bieti
WBGene00004474	rps-5	93	59.799	ENSRBIG00000031827	-	96	59.799	Rhinopithecus_bieti
WBGene00004474	rps-5	93	60.302	ENSRROG00000039369	-	96	60.302	Rhinopithecus_roxellana
WBGene00004474	rps-5	94	86.364	ENSRROG00000036995	RPS5	90	86.364	Rhinopithecus_roxellana
WBGene00004474	rps-5	90	68.783	YJR123W	RPS5	83	68.783	Saccharomyces_cerevisiae
WBGene00004474	rps-5	84	74.576	ENSSBOG00000033455	-	89	84.848	Saimiri_boliviensis_boliviensis
WBGene00004474	rps-5	94	86.364	ENSSBOG00000030947	-	97	86.364	Saimiri_boliviensis_boliviensis
WBGene00004474	rps-5	94	86.364	ENSSHAG00000000092	RPS5	97	86.364	Sarcophilus_harrisii
WBGene00004474	rps-5	94	85.427	ENSSFOG00015016609	rps5	98	85.427	Scleropages_formosus
WBGene00004474	rps-5	95	85.075	ENSSFOG00015019773	rps5	100	85.075	Scleropages_formosus
WBGene00004474	rps-5	94	84.925	ENSSMAG00000020321	rps5	98	84.925	Scophthalmus_maximus
WBGene00004474	rps-5	94	85.427	ENSSDUG00000019721	rps5	98	85.427	Seriola_dumerili
WBGene00004474	rps-5	91	61.257	ENSSLDG00000006453	-	98	61.257	Seriola_lalandi_dorsalis
WBGene00004474	rps-5	94	85.427	ENSSLDG00000024207	rps5	98	85.427	Seriola_lalandi_dorsalis
WBGene00004474	rps-5	94	86.364	ENSSARG00000001506	RPS5	97	86.364	Sorex_araneus
WBGene00004474	rps-5	94	84.422	ENSSPUG00000014897	RPS5	98	84.422	Sphenodon_punctatus
WBGene00004474	rps-5	94	69.849	ENSSPAG00000005082	rps5	96	69.849	Stegastes_partitus
WBGene00004474	rps-5	94	86.364	ENSSSCG00000004002	RPS5	97	86.364	Sus_scrofa
WBGene00004474	rps-5	99	82.609	ENSTRUG00000023565	rps5	99	82.609	Takifugu_rubripes
WBGene00004474	rps-5	73	76.623	ENSTNIG00000001130	rps5	99	76.623	Tetraodon_nigroviridis
WBGene00004474	rps-5	80	82.840	ENSTBEG00000016955	RPS5	94	82.840	Tupaia_belangeri
WBGene00004474	rps-5	94	77.778	ENSTTRG00000001991	RPS5	97	77.778	Tursiops_truncatus
WBGene00004474	rps-5	94	86.364	ENSUAMG00000019475	RPS5	97	86.364	Ursus_americanus
WBGene00004474	rps-5	94	86.364	ENSUMAG00000003934	RPS5	97	86.364	Ursus_maritimus
WBGene00004474	rps-5	68	81.818	ENSVPAG00000000903	RPS5	96	81.818	Vicugna_pacos
WBGene00004474	rps-5	94	86.364	ENSVVUG00000002269	RPS5	92	86.364	Vulpes_vulpes
WBGene00004474	rps-5	91	85.938	ENSXETG00000020355	rps5	94	85.938	Xenopus_tropicalis
WBGene00004474	rps-5	94	85.427	ENSXCOG00000019549	rps5	98	85.427	Xiphophorus_couchianus
WBGene00004474	rps-5	94	85.427	ENSXMAG00000014201	rps5	98	85.427	Xiphophorus_maculatus