EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004478 (Gene tree)
Gene ID: -
Gene Symbol: rps-9
Alias: -
Full Name: 40S ribosomal protein S9
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 992 bases
Position: chrII:11125371-11126362
Accession: Q20228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F40F8	S4	PF01479.25	1.2e-07	1	1
F40F8	Ribosomal_S4	PF00163.19	3.8e-05	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F40F8.10	-	669	NM_063983	F40F8.10	189 (aa)	NP_496384	Q20228

Gene Model

Click here to download WBGene00004478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004478	rps-9	90	83.529	ENSG00000170889	RPS9	95	81.818	Homo_sapiens
WBGene00004478	rps-9	90	84.118	ENSAPOG00000016312	rps9	95	81.622	Acanthochromis_polyacanthus
WBGene00004478	rps-9	90	83.529	ENSAMEG00000004630	RPS9	95	81.081	Ailuropoda_melanoleuca
WBGene00004478	rps-9	90	84.118	ENSAOCG00000021159	rps9	95	81.622	Amphiprion_ocellaris
WBGene00004478	rps-9	90	84.118	ENSAPEG00000008214	rps9	95	81.622	Amphiprion_percula
WBGene00004478	rps-9	90	84.706	ENSATEG00000022661	rps9	95	82.162	Anabas_testudineus
WBGene00004478	rps-9	90	82.941	ENSACAG00000016566	RPS9	95	80.541	Anolis_carolinensis
WBGene00004478	rps-9	90	83.529	ENSANAG00000004180	RPS9	95	81.818	Aotus_nancymaae
WBGene00004478	rps-9	89	85.119	ENSACLG00000021384	rps9	95	81.622	Astatotilapia_calliptera
WBGene00004478	rps-9	68	85.271	ENSAMXG00000010402	rps9	95	85.271	Astyanax_mexicanus
WBGene00004478	rps-9	90	83.529	ENSBTAG00000006487	RPS9	95	81.081	Bos_taurus
WBGene00004478	rps-9	74	78.014	ENSCJAG00000017658	-	82	78.014	Callithrix_jacchus
WBGene00004478	rps-9	82	83.226	ENSCJAG00000001130	-	95	80.000	Callithrix_jacchus
WBGene00004478	rps-9	90	83.529	ENSCAFG00000002652	RPS9	95	81.081	Canis_familiaris
WBGene00004478	rps-9	90	83.529	ENSCAFG00020018329	RPS9	95	81.818	Canis_lupus_dingo
WBGene00004478	rps-9	90	83.529	ENSCHIG00000024085	RPS9	95	81.081	Capra_hircus
WBGene00004478	rps-9	94	72.881	ENSCHIG00000026324	-	90	78.295	Capra_hircus
WBGene00004478	rps-9	90	83.529	ENSTSYG00000012074	-	95	81.081	Carlito_syrichta
WBGene00004478	rps-9	57	86.916	ENSCAPG00000013312	RPS9	75	82.787	Cavia_aperea
WBGene00004478	rps-9	90	83.529	ENSCPOG00000020893	RPS9	95	81.081	Cavia_porcellus
WBGene00004478	rps-9	90	83.529	ENSCCAG00000007081	-	95	81.818	Cebus_capucinus
WBGene00004478	rps-9	90	83.529	ENSCATG00000029320	RPS9	95	81.818	Cercocebus_atys
WBGene00004478	rps-9	90	83.529	ENSCLAG00000000504	RPS9	95	81.081	Chinchilla_lanigera
WBGene00004478	rps-9	84	83.544	ENSCSAG00000018755	-	95	80.541	Chlorocebus_sabaeus
WBGene00004478	rps-9	86	87.037	ENSCPBG00000018251	RPS9	97	85.227	Chrysemys_picta_bellii
WBGene00004478	rps-9	97	79.781	ENSCING00000021248	-	96	79.781	Ciona_intestinalis
WBGene00004478	rps-9	66	84.000	ENSCSAVG00000003644	-	93	84.000	Ciona_savignyi
WBGene00004478	rps-9	90	83.529	ENSCANG00000036604	RPS9	95	81.081	Colobus_angolensis_palliatus
WBGene00004478	rps-9	72	67.376	ENSCANG00000036954	-	75	67.376	Colobus_angolensis_palliatus
WBGene00004478	rps-9	90	83.529	ENSCGRG00001001119	Rps9	95	81.081	Cricetulus_griseus_chok1gshd
WBGene00004478	rps-9	90	70.588	ENSCGRG00000000157	-	95	69.189	Cricetulus_griseus_crigri
WBGene00004478	rps-9	90	84.118	ENSCSEG00000018918	rps9	95	81.622	Cynoglossus_semilaevis
WBGene00004478	rps-9	90	84.118	ENSCVAG00000007999	rps9	95	81.622	Cyprinodon_variegatus
WBGene00004478	rps-9	92	82.759	ENSDARG00000011405	rps9	95	84.375	Danio_rerio
WBGene00004478	rps-9	90	83.529	ENSDNOG00000044158	RPS9	95	81.081	Dasypus_novemcinctus
WBGene00004478	rps-9	90	83.529	ENSDORG00000015828	Rps9	95	81.081	Dipodomys_ordii
WBGene00004478	rps-9	95	78.771	FBgn0010408	RpS9	98	79.104	Drosophila_melanogaster
WBGene00004478	rps-9	90	63.529	ENSETEG00000009696	RPS9	96	62.366	Echinops_telfairi
WBGene00004478	rps-9	92	83.908	ENSEBUG00000011539	rps9	95	82.796	Eptatretus_burgeri
WBGene00004478	rps-9	90	83.529	ENSECAG00000020316	RPS9	95	81.081	Equus_caballus
WBGene00004478	rps-9	90	84.118	ENSELUG00000015000	rps9	95	82.609	Esox_lucius
WBGene00004478	rps-9	90	83.529	ENSFCAG00000014048	RPS9	95	81.818	Felis_catus
WBGene00004478	rps-9	90	83.529	ENSFDAG00000007469	RPS9	95	81.081	Fukomys_damarensis
WBGene00004478	rps-9	90	84.118	ENSFHEG00000016569	rps9	95	81.622	Fundulus_heteroclitus
WBGene00004478	rps-9	97	81.622	ENSGMOG00000005074	rps9	95	81.622	Gadus_morhua
WBGene00004478	rps-9	90	84.118	ENSGAFG00000013201	rps9	95	81.622	Gambusia_affinis
WBGene00004478	rps-9	97	82.065	ENSGACG00000010761	rps9	94	83.846	Gasterosteus_aculeatus
WBGene00004478	rps-9	90	84.118	ENSGAGG00000002562	RPS9	95	82.609	Gopherus_agassizii
WBGene00004478	rps-9	90	83.529	ENSGGOG00000027839	-	95	81.818	Gorilla_gorilla
WBGene00004478	rps-9	66	80.000	ENSGGOG00000025031	-	78	80.000	Gorilla_gorilla
WBGene00004478	rps-9	90	81.176	ENSGGOG00000042271	-	92	79.330	Gorilla_gorilla
WBGene00004478	rps-9	97	72.432	ENSGGOG00000025810	-	95	72.432	Gorilla_gorilla
WBGene00004478	rps-9	90	84.118	ENSHBUG00000013399	rps9	95	81.622	Haplochromis_burtoni
WBGene00004478	rps-9	90	83.529	ENSHGLG00000017784	RPS9	95	81.081	Heterocephalus_glaber_female
WBGene00004478	rps-9	90	83.529	ENSHGLG00100003924	RPS9	95	81.081	Heterocephalus_glaber_male
WBGene00004478	rps-9	90	83.529	ENSHCOG00000020779	rps9	95	81.081	Hippocampus_comes
WBGene00004478	rps-9	92	83.237	ENSIPUG00000000061	rps9	95	82.162	Ictalurus_punctatus
WBGene00004478	rps-9	90	83.529	ENSSTOG00000020325	RPS9	95	81.081	Ictidomys_tridecemlineatus
WBGene00004478	rps-9	68	82.946	ENSJJAG00000015795	-	95	82.946	Jaculus_jaculus
WBGene00004478	rps-9	90	69.412	ENSJJAG00000015488	-	95	68.108	Jaculus_jaculus
WBGene00004478	rps-9	90	79.412	ENSJJAG00000013812	-	95	77.297	Jaculus_jaculus
WBGene00004478	rps-9	90	84.118	ENSKMAG00000005101	rps9	95	81.622	Kryptolebias_marmoratus
WBGene00004478	rps-9	90	84.118	ENSLBEG00000017125	rps9	95	81.622	Labrus_bergylta
WBGene00004478	rps-9	69	83.206	ENSLACG00000011099	RPS9	94	83.206	Latimeria_chalumnae
WBGene00004478	rps-9	90	60.000	ENSLOCG00000008007	rps9	95	60.326	Lepisosteus_oculatus
WBGene00004478	rps-9	90	83.529	ENSLAFG00000010760	RPS9	95	81.081	Loxodonta_africana
WBGene00004478	rps-9	90	83.529	ENSMFAG00000033649	RPS9	95	81.081	Macaca_fascicularis
WBGene00004478	rps-9	90	83.529	ENSMMUG00000022552	RPS9	95	81.081	Macaca_mulatta
WBGene00004478	rps-9	90	83.529	ENSMNEG00000013713	RPS9	95	81.081	Macaca_nemestrina
WBGene00004478	rps-9	90	83.529	ENSMLEG00000023735	RPS9	95	81.081	Mandrillus_leucophaeus
WBGene00004478	rps-9	90	84.118	ENSMAMG00000019474	rps9	95	81.622	Mastacembelus_armatus
WBGene00004478	rps-9	90	84.118	ENSMZEG00005016370	rps9	95	81.622	Maylandia_zebra
WBGene00004478	rps-9	90	83.529	ENSMAUG00000016938	Rps9	95	81.081	Mesocricetus_auratus
WBGene00004478	rps-9	90	83.529	ENSMICG00000014928	RPS9	95	81.081	Microcebus_murinus
WBGene00004478	rps-9	92	82.759	ENSMOCG00000004350	-	95	80.214	Microtus_ochrogaster
WBGene00004478	rps-9	89	79.882	ENSMOCG00000006744	-	96	76.757	Microtus_ochrogaster
WBGene00004478	rps-9	90	83.529	ENSMOCG00000010762	Rps9	95	81.081	Microtus_ochrogaster
WBGene00004478	rps-9	97	81.622	ENSMMOG00000016468	rps9	95	81.622	Mola_mola
WBGene00004478	rps-9	97	61.081	ENSMODG00000003974	RPS9	95	61.081	Monodelphis_domestica
WBGene00004478	rps-9	90	84.706	ENSMALG00000009363	rps9	95	82.162	Monopterus_albus
WBGene00004478	rps-9	90	83.529	MGP_CAROLIEiJ_G0029100	Rps9	95	82.946	Mus_caroli
WBGene00004478	rps-9	90	83.529	ENSMUSG00000006333	Rps9	95	82.946	Mus_musculus
WBGene00004478	rps-9	90	83.529	MGP_PahariEiJ_G0020969	Rps9	95	82.946	Mus_pahari
WBGene00004478	rps-9	90	83.529	MGP_SPRETEiJ_G0030153	Rps9	95	82.946	Mus_spretus
WBGene00004478	rps-9	90	83.529	ENSMPUG00000010394	RPS9	95	81.081	Mustela_putorius_furo
WBGene00004478	rps-9	100	72.775	ENSMPUG00000019169	-	98	72.775	Mustela_putorius_furo
WBGene00004478	rps-9	90	82.941	ENSMLUG00000016897	-	95	80.541	Myotis_lucifugus
WBGene00004478	rps-9	90	82.353	ENSMLUG00000002154	-	95	80.000	Myotis_lucifugus
WBGene00004478	rps-9	67	76.378	ENSNGAG00000017852	-	95	80.702	Nannospalax_galili
WBGene00004478	rps-9	90	83.529	ENSNGAG00000023394	Rps9	95	81.081	Nannospalax_galili
WBGene00004478	rps-9	90	84.118	ENSNBRG00000003450	rps9	95	81.622	Neolamprologus_brichardi
WBGene00004478	rps-9	90	83.529	ENSNLEG00000006314	RPS9	95	81.081	Nomascus_leucogenys
WBGene00004478	rps-9	70	80.303	ENSNLEG00000018247	-	94	80.303	Nomascus_leucogenys
WBGene00004478	rps-9	69	77.692	ENSNLEG00000035027	-	92	76.923	Nomascus_leucogenys
WBGene00004478	rps-9	90	83.529	ENSOPRG00000001628	-	95	81.081	Ochotona_princeps
WBGene00004478	rps-9	90	80.588	ENSODEG00000019680	-	96	78.495	Octodon_degus
WBGene00004478	rps-9	78	72.297	ENSODEG00000016631	-	85	72.297	Octodon_degus
WBGene00004478	rps-9	90	80.588	ENSODEG00000019010	-	95	78.378	Octodon_degus
WBGene00004478	rps-9	90	77.059	ENSODEG00000019411	-	95	75.000	Octodon_degus
WBGene00004478	rps-9	90	83.529	ENSODEG00000002087	-	95	81.081	Octodon_degus
WBGene00004478	rps-9	90	84.118	ENSONIG00000012752	rps9	95	81.622	Oreochromis_niloticus
WBGene00004478	rps-9	68	82.171	ENSOANG00000014748	-	95	82.171	Ornithorhynchus_anatinus
WBGene00004478	rps-9	90	83.529	ENSORLG00000011258	rps9	95	81.081	Oryzias_latipes
WBGene00004478	rps-9	90	83.529	ENSORLG00020007734	rps9	95	81.081	Oryzias_latipes_hni
WBGene00004478	rps-9	90	83.529	ENSORLG00015013498	rps9	92	83.077	Oryzias_latipes_hsok
WBGene00004478	rps-9	90	83.529	ENSOMEG00000010547	rps9	95	81.081	Oryzias_melastigma
WBGene00004478	rps-9	90	83.529	ENSOGAG00000006813	RPS9	95	81.081	Otolemur_garnettii
WBGene00004478	rps-9	92	78.161	ENSOARG00000010831	-	96	78.161	Ovis_aries
WBGene00004478	rps-9	90	81.176	ENSOARG00000002753	-	95	78.919	Ovis_aries
WBGene00004478	rps-9	90	83.529	ENSPPAG00000028401	RPS9	95	81.818	Pan_paniscus
WBGene00004478	rps-9	97	63.243	ENSPPAG00000043211	-	95	63.243	Pan_paniscus
WBGene00004478	rps-9	90	83.529	ENSPPRG00000011810	RPS9	95	81.818	Panthera_pardus
WBGene00004478	rps-9	78	84.354	ENSPTIG00000010169	RPS9	81	82.911	Panthera_tigris_altaica
WBGene00004478	rps-9	90	83.529	ENSPTRG00000011449	RPS9	95	81.818	Pan_troglodytes
WBGene00004478	rps-9	97	66.486	ENSPTRG00000045479	-	95	66.486	Pan_troglodytes
WBGene00004478	rps-9	73	76.812	ENSPTRG00000041697	-	89	76.812	Pan_troglodytes
WBGene00004478	rps-9	90	83.529	ENSPTRG00000050995	-	95	81.818	Pan_troglodytes
WBGene00004478	rps-9	90	68.824	ENSPANG00000011359	RPS9	95	67.568	Papio_anubis
WBGene00004478	rps-9	90	77.647	ENSPSIG00000005938	RPS9	94	76.503	Pelodiscus_sinensis
WBGene00004478	rps-9	90	84.118	ENSPMGG00000012078	rps9	95	81.622	Periophthalmus_magnuspinnatus
WBGene00004478	rps-9	90	83.529	ENSPEMG00000013302	-	95	81.081	Peromyscus_maniculatus_bairdii
WBGene00004478	rps-9	97	80.978	ENSPMAG00000000193	-	95	80.978	Petromyzon_marinus
WBGene00004478	rps-9	97	80.541	ENSPCIG00000023372	RPS9	95	80.541	Phascolarctos_cinereus
WBGene00004478	rps-9	90	83.626	ENSPFOG00000009299	rps9	95	81.183	Poecilia_formosa
WBGene00004478	rps-9	90	84.118	ENSPLAG00000012829	rps9	95	81.622	Poecilia_latipinna
WBGene00004478	rps-9	90	84.118	ENSPMEG00000017606	rps9	95	81.622	Poecilia_mexicana
WBGene00004478	rps-9	68	84.496	ENSPREG00000007924	rps9	95	84.496	Poecilia_reticulata
WBGene00004478	rps-9	90	83.529	ENSPPYG00000010377	RPS9	95	81.081	Pongo_abelii
WBGene00004478	rps-9	90	84.118	ENSPCAG00000012395	RPS9	96	81.215	Procavia_capensis
WBGene00004478	rps-9	90	83.529	ENSPCOG00000013987	RPS9	95	81.818	Propithecus_coquereli
WBGene00004478	rps-9	90	50.588	ENSPVAG00000015571	RPS9	95	50.811	Pteropus_vampyrus
WBGene00004478	rps-9	90	84.118	ENSPNYG00000002115	rps9	95	81.622	Pundamilia_nyererei
WBGene00004478	rps-9	90	84.118	ENSPNAG00000011249	rps9	95	81.622	Pygocentrus_nattereri
WBGene00004478	rps-9	90	83.529	ENSRNOG00000058909	Rps9l1	95	82.946	Rattus_norvegicus
WBGene00004478	rps-9	90	78.824	ENSRNOG00000050067	AABR07026058.1	95	76.757	Rattus_norvegicus
WBGene00004478	rps-9	90	80.000	ENSRNOG00000039203	AABR07040892.1	95	77.838	Rattus_norvegicus
WBGene00004478	rps-9	69	77.099	ENSRBIG00000040750	-	82	76.744	Rhinopithecus_bieti
WBGene00004478	rps-9	90	73.529	ENSRBIG00000042902	-	94	71.739	Rhinopithecus_bieti
WBGene00004478	rps-9	90	83.529	ENSRBIG00000041681	RPS9	95	81.081	Rhinopithecus_bieti
WBGene00004478	rps-9	90	64.118	ENSRROG00000030184	-	94	62.703	Rhinopithecus_roxellana
WBGene00004478	rps-9	69	77.099	ENSRROG00000043910	-	83	76.923	Rhinopithecus_roxellana
WBGene00004478	rps-9	90	83.529	ENSRROG00000036731	RPS9	95	81.081	Rhinopithecus_roxellana
WBGene00004478	rps-9	93	67.614	YBR189W	RPS9B	97	65.263	Saccharomyces_cerevisiae
WBGene00004478	rps-9	97	65.405	YPL081W	RPS9A	96	64.211	Saccharomyces_cerevisiae
WBGene00004478	rps-9	89	61.988	ENSSBOG00000024187	-	91	61.988	Saimiri_boliviensis_boliviensis
WBGene00004478	rps-9	90	83.529	ENSSBOG00000015501	-	95	81.818	Saimiri_boliviensis_boliviensis
WBGene00004478	rps-9	92	83.237	ENSSFOG00015000650	rps9	95	82.162	Scleropages_formosus
WBGene00004478	rps-9	90	84.118	ENSSMAG00000013149	rps9	95	81.622	Scophthalmus_maximus
WBGene00004478	rps-9	90	84.118	ENSSDUG00000008689	rps9	95	81.622	Seriola_dumerili
WBGene00004478	rps-9	90	84.118	ENSSLDG00000022240	rps9	95	81.622	Seriola_lalandi_dorsalis
WBGene00004478	rps-9	90	83.529	ENSSARG00000005909	RPS9	95	81.081	Sorex_araneus
WBGene00004478	rps-9	92	79.769	ENSSARG00000010223	-	97	77.660	Sorex_araneus
WBGene00004478	rps-9	97	81.081	ENSSPUG00000008604	RPS9	95	81.081	Sphenodon_punctatus
WBGene00004478	rps-9	90	84.118	ENSSPAG00000016660	rps9	95	81.622	Stegastes_partitus
WBGene00004478	rps-9	90	83.529	ENSSSCG00000029785	RPS9	95	81.818	Sus_scrofa
WBGene00004478	rps-9	97	82.162	ENSTRUG00000015896	rps9	95	82.162	Takifugu_rubripes
WBGene00004478	rps-9	90	72.941	ENSTBEG00000003585	RPS9	95	71.351	Tupaia_belangeri
WBGene00004478	rps-9	84	86.076	ENSTTRG00000006572	RPS9	99	83.237	Tursiops_truncatus
WBGene00004478	rps-9	89	84.524	ENSUMAG00000010897	RPS9	95	81.818	Ursus_maritimus
WBGene00004478	rps-9	90	83.529	ENSVVUG00000008202	-	95	81.081	Vulpes_vulpes
WBGene00004478	rps-9	90	84.118	ENSXETG00000009030	rps9	95	81.622	Xenopus_tropicalis
WBGene00004478	rps-9	90	84.118	ENSXMAG00000012175	rps9	95	81.622	Xiphophorus_maculatus