EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00004479 (Gene tree)
Gene ID: -
Gene Symbol: rps-10
Alias: -
Full Name: Ribosomal Protein%2C Small subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 633 bases
Position: chrI:4583873-4584505
Accession: O01869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
D1007	S10_plectin	PF03501.15	4.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
D1007.6	-	533	NM_058997	D1007.6	149 (aa)	NP_491398	O01869

Gene Model

Click here to download WBGene00004479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00004479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00004479	rps-10	62	56.383	ENSAPOG00000014059	-	65	56.383	Acanthochromis_polyacanthus
WBGene00004479	rps-10	62	55.319	ENSACIG00000013806	-	52	55.319	Amphilophus_citrinellus
WBGene00004479	rps-10	99	39.623	ENSACIG00000019704	-	82	39.623	Amphilophus_citrinellus
WBGene00004479	rps-10	79	44.538	ENSAOCG00000007730	-	63	44.538	Amphiprion_ocellaris
WBGene00004479	rps-10	62	56.383	ENSAOCG00000011000	-	55	56.383	Amphiprion_ocellaris
WBGene00004479	rps-10	73	35.780	ENSAPEG00000017745	-	74	35.780	Amphiprion_percula
WBGene00004479	rps-10	62	56.383	ENSAPEG00000019531	-	53	56.383	Amphiprion_percula
WBGene00004479	rps-10	62	48.936	ENSATEG00000004340	-	67	48.936	Anabas_testudineus
WBGene00004479	rps-10	89	40.136	ENSACLG00000001013	-	85	40.136	Astatotilapia_calliptera
WBGene00004479	rps-10	68	51.786	ENSAMXG00000037914	-	67	51.786	Astyanax_mexicanus
WBGene00004479	rps-10	89	47.826	ENSCING00000006180	-	100	47.799	Ciona_intestinalis
WBGene00004479	rps-10	62	56.383	ENSCSEG00000009179	-	55	56.383	Cynoglossus_semilaevis
WBGene00004479	rps-10	97	45.283	FBgn0027494	RpS10a	98	45.732	Drosophila_melanogaster
WBGene00004479	rps-10	97	53.165	FBgn0285947	RpS10b	99	53.165	Drosophila_melanogaster
WBGene00004479	rps-10	80	42.975	ENSEBUG00000015221	-	79	42.975	Eptatretus_burgeri
WBGene00004479	rps-10	62	55.319	ENSFHEG00000008769	-	59	55.319	Fundulus_heteroclitus
WBGene00004479	rps-10	99	42.038	ENSGAFG00000001335	-	76	42.038	Gambusia_affinis
WBGene00004479	rps-10	62	56.383	ENSHBUG00000023819	-	57	56.383	Haplochromis_burtoni
WBGene00004479	rps-10	89	40.136	ENSHBUG00000018067	-	85	40.136	Haplochromis_burtoni
WBGene00004479	rps-10	78	48.718	ENSLBEG00000020432	-	72	48.718	Labrus_bergylta
WBGene00004479	rps-10	86	43.624	ENSLACG00000010998	-	86	43.624	Latimeria_chalumnae
WBGene00004479	rps-10	89	40.136	ENSMZEG00005026198	-	85	40.136	Maylandia_zebra
WBGene00004479	rps-10	62	56.383	ENSMZEG00005007838	-	57	56.383	Maylandia_zebra
WBGene00004479	rps-10	62	60.638	ENSMMOG00000003228	-	53	60.638	Mola_mola
WBGene00004479	rps-10	62	50.000	ENSMALG00000015614	-	58	50.000	Monopterus_albus
WBGene00004479	rps-10	62	56.383	ENSNBRG00000008848	-	65	56.383	Neolamprologus_brichardi
WBGene00004479	rps-10	89	42.568	ENSNBRG00000016554	-	85	42.568	Neolamprologus_brichardi
WBGene00004479	rps-10	66	54.455	ENSPKIG00000013061	-	55	54.455	Paramormyrops_kingsleyae
WBGene00004479	rps-10	62	56.383	ENSPMGG00000017071	-	50	56.383	Periophthalmus_magnuspinnatus
WBGene00004479	rps-10	100	39.241	ENSPMAG00000003064	-	98	39.241	Petromyzon_marinus
WBGene00004479	rps-10	62	51.613	ENSPMAG00000010266	-	50	51.613	Petromyzon_marinus
WBGene00004479	rps-10	62	55.319	ENSPLAG00000012690	-	56	55.319	Poecilia_latipinna
WBGene00004479	rps-10	62	56.383	ENSPNYG00000012665	-	57	56.383	Pundamilia_nyererei
WBGene00004479	rps-10	89	40.136	ENSPNYG00000006286	-	85	40.136	Pundamilia_nyererei
WBGene00004479	rps-10	62	53.763	ENSPNAG00000021290	-	53	53.763	Pygocentrus_nattereri
WBGene00004479	rps-10	61	54.945	YOR293W	RPS10A	86	54.945	Saccharomyces_cerevisiae
WBGene00004479	rps-10	61	54.945	YMR230W	RPS10B	86	54.945	Saccharomyces_cerevisiae
WBGene00004479	rps-10	66	51.000	ENSSFOG00015012004	-	56	51.000	Scleropages_formosus
WBGene00004479	rps-10	68	45.631	ENSSDUG00000011052	-	63	45.631	Seriola_dumerili
WBGene00004479	rps-10	62	54.255	ENSSDUG00000010997	-	56	54.255	Seriola_dumerili
WBGene00004479	rps-10	62	54.255	ENSSLDG00000012473	-	60	54.255	Seriola_lalandi_dorsalis
WBGene00004479	rps-10	89	40.000	ENSSLDG00000016257	-	82	40.000	Seriola_lalandi_dorsalis
WBGene00004479	rps-10	71	55.046	ENSSPAG00000015615	-	85	55.046	Stegastes_partitus
WBGene00004479	rps-10	79	49.580	ENSSSCG00000033521	-	94	43.871	Sus_scrofa
WBGene00004479	rps-10	100	39.521	ENSXETG00000032983	-	85	40.244	Xenopus_tropicalis
WBGene00004479	rps-10	62	55.319	ENSXCOG00000016917	-	58	55.319	Xiphophorus_couchianus
WBGene00004479	rps-10	81	48.120	ENSXMAG00000029046	-	76	48.120	Xiphophorus_maculatus